RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 C6orf99Q4VX62 202 aa8.14□□□□□ -1.11
COL4A1-202ENST00000467182 SPCS1Q9Y6A9 102 aa8.14□□□□□ -1.11
COL4A1-202ENST00000467182 PRYO14603 147 aa8.13□□□□□ -1.11
COL4A1-202ENST00000467182 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
COL4A1-202ENST00000467182 SCGB1C2P0DMR2 95 aa8.13□□□□□ -1.11
COL4A1-202ENST00000467182 SPRR1AP35321 89 aa8.13□□□□□ -1.11
COL4A1-202ENST00000467182 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
COL4A1-202ENST00000467182 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
COL4A1-202ENST00000467182 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
COL4A1-202ENST00000467182 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
COL4A1-202ENST00000467182 COX6CP09669 75 aa8.12□□□□□ -1.11
COL4A1-202ENST00000467182 LYRM7Q5U5X0 104 aa8.11□□□□□ -1.11
COL4A1-202ENST00000467182 DIRC1Q969H9 104 aa8.11□□□□□ -1.11
COL4A1-202ENST00000467182 DPH3Q96FX2 82 aa8.11□□□□□ -1.11
COL4A1-202ENST00000467182 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
COL4A1-202ENST00000467182 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
COL4A1-202ENST00000467182 TRBV7-6A0A0J9YX20 115 aa8.1□□□□□ -1.11
COL4A1-202ENST00000467182 H0YGX0 51 aa8.1□□□□□ -1.11
COL4A1-202ENST00000467182 LST1O00453 97 aa8.1□□□□□ -1.11
COL4A1-202ENST00000467182 ELOF1P60002 83 aaKnown RBP8.09□□□□□ -1.11
COL4A1-202ENST00000467182 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
COL4A1-202ENST00000467182 H3BMG7 143 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 COX7BP24311 80 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 UBE2V1Q13404 147 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 REG3GQ6UW15 175 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
COL4A1-202ENST00000467182 B5MCH6 92 aa8.07□□□□□ -1.12
COL4A1-202ENST00000467182 UBE2BP63146 152 aa8.07□□□□□ -1.12
COL4A1-202ENST00000467182 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
COL4A1-202ENST00000467182 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
COL4A1-202ENST00000467182 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
COL4A1-202ENST00000467182 PRO0461Q9UI25 63 aa8.06□□□□□ -1.12
COL4A1-202ENST00000467182 TRACP01848 142 aa8.05□□□□□ -1.12
COL4A1-202ENST00000467182 HAMPP81172 84 aa8.05□□□□□ -1.12
COL4A1-202ENST00000467182 A0A1B0GX51 115 aa8.04□□□□□ -1.12
COL4A1-202ENST00000467182 Q6ZRX8 168 aa8.04□□□□□ -1.12
COL4A1-202ENST00000467182 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
COL4A1-202ENST00000467182 Q9BRP9 147 aa8.03□□□□□ -1.12
COL4A1-202ENST00000467182 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
COL4A1-202ENST00000467182 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
COL4A1-202ENST00000467182 MTURNQ8N3F0 131 aa8.02□□□□□ -1.13
COL4A1-202ENST00000467182 PSORS1C2Q9UIG4 136 aa8.02□□□□□ -1.13
COL4A1-202ENST00000467182 hADV29S1A0JD25 119 aa8.01□□□□□ -1.13
COL4A1-202ENST00000467182 BCE1O60756 84 aa8.01□□□□□ -1.13
COL4A1-202ENST00000467182 XGP55808 180 aa8.01□□□□□ -1.13
COL4A1-202ENST00000467182 FAM19A1Q7Z5A9 133 aa8.01□□□□□ -1.13
COL4A1-202ENST00000467182 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
COL4A1-202ENST00000467182 C9JAW5 83 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 H0Y9J4 135 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 INAFM2P0DMQ5 153 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 PRLHP81277 87 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 LINC01600Q96MT4 127 aa8□□□□□ -1.13
COL4A1-202ENST00000467182 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
COL4A1-202ENST00000467182 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
COL4A1-202ENST00000467182 F8W1H4 67 aa7.97□□□□□ -1.13
COL4A1-202ENST00000467182 SLC25A20O43772 301 aa7.97□□□□□ -1.13
COL4A1-202ENST00000467182 RYR1P21817 5038 aa7.97□□□□□ -1.13
COL4A1-202ENST00000467182 H3BT86 120 aa7.96□□□□□ -1.14
COL4A1-202ENST00000467182 DNAL4O96015 105 aa7.96□□□□□ -1.14
COL4A1-202ENST00000467182 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
COL4A1-202ENST00000467182 Q6ZQY7 126 aa7.96□□□□□ -1.14
COL4A1-202ENST00000467182 VPS13BQ7Z7G8 4022 aa7.95□□□□□ -1.14
COL4A1-202ENST00000467182 LINC01547P58512 204 aaPredicted RBP7.95□□□□□ -1.14
COL4A1-202ENST00000467182 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
COL4A1-202ENST00000467182 BAALC-AS2P0C853 105 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 UBE2AP49459 152 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 FAT1Q14517 4588 aa7.94□□□□□ -1.14
COL4A1-202ENST00000467182 SNCGO76070 127 aa7.93□□□□□ -1.14
COL4A1-202ENST00000467182 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
COL4A1-202ENST00000467182 HIGD2AQ9BW72 106 aa7.92□□□□□ -1.14
COL4A1-202ENST00000467182 HSPG2P98160 4391 aa7.91□□□□□ -1.14
COL4A1-202ENST00000467182 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
COL4A1-202ENST00000467182 ZNF861PO60384 105 aa7.91□□□□□ -1.14
COL4A1-202ENST00000467182 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
COL4A1-202ENST00000467182 Q8N377 158 aa7.9□□□□□ -1.14
COL4A1-202ENST00000467182 TMEM256-PLSCR3K7ERE1 68 aa7.88□□□□□ -1.15
COL4A1-202ENST00000467182 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
COL4A1-202ENST00000467182 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
COL4A1-202ENST00000467182 H3BQ85 93 aa7.87□□□□□ -1.15
COL4A1-202ENST00000467182 SMR3BP02814 79 aaPredicted RBP7.87□□□□□ -1.15
COL4A1-202ENST00000467182 SPRR1BP22528 89 aa7.87□□□□□ -1.15
COL4A1-202ENST00000467182 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
COL4A1-202ENST00000467182 TEN1Q86WV5 123 aa7.87□□□□□ -1.15
COL4A1-202ENST00000467182 OBSCN-AS1Q96MR7 158 aa7.87□□□□□ -1.15
COL4A1-202ENST00000467182 CDK2AP2O75956 126 aa7.86□□□□□ -1.15
COL4A1-202ENST00000467182 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
COL4A1-202ENST00000467182 DEFB105AQ8NG35 78 aa7.86□□□□□ -1.15
COL4A1-202ENST00000467182 PPDPFLQ8WWR9 84 aa7.86□□□□□ -1.15
COL4A1-202ENST00000467182 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
COL4A1-202ENST00000467182 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
COL4A1-202ENST00000467182 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
COL4A1-202ENST00000467182 TEX49A0A1B0GTD5 131 aa7.84□□□□□ -1.15
COL4A1-202ENST00000467182 GHRHP01286 108 aa7.84□□□□□ -1.15
COL4A1-202ENST00000467182 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
COL4A1-202ENST00000467182 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms