RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 K7ERJ3 54 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 COX7A2LO14548 114 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 IGLV7-43P04211 117 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 LGALS3P17931 250 aaKnown RBP5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 CAMK2N2Q96S95 79 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 RPL39P62891 51 aaKnown RBP5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 TMEM170BQ5T4T1 132 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 PPDPFLQ8WWR9 84 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 PLEKHB2Q96CS7 222 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
PTPDC1-203ENST00000467049 H0Y9J4 135 aa5.42□□□□□ -1.54
PTPDC1-203ENST00000467049 LEPROTO15243 131 aa5.42□□□□□ -1.54
PTPDC1-203ENST00000467049 SNCGO76070 127 aa5.42□□□□□ -1.54
PTPDC1-203ENST00000467049 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
PTPDC1-203ENST00000467049 J3QQQ9 107 aa5.41□□□□□ -1.54
PTPDC1-203ENST00000467049 UBE2D1P51668 147 aa5.41□□□□□ -1.54
PTPDC1-203ENST00000467049 IGLV4-3A0A075B6K6 122 aa5.4□□□□□ -1.55
PTPDC1-203ENST00000467049 TMEM223A0PJW6 202 aa5.4□□□□□ -1.55
PTPDC1-203ENST00000467049 SPAG11BQ08648 103 aa5.4□□□□□ -1.55
PTPDC1-203ENST00000467049 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 HERVK_113P63121 156 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 C4orf26Q17RF5 130 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 UBE2D4Q9Y2X8 147 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 A0A087WZ39 114 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 ZNF22P17026 224 aaPredicted RBP5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 RPL13AP40429 203 aaKnown RBP5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 Q5XG85 94 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 AMELXQ99217 191 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
PTPDC1-203ENST00000467049 MRPS36P82909 103 aaKnown RBP5.38□□□□□ -1.55
PTPDC1-203ENST00000467049 PRR4Q16378 134 aa5.38□□□□□ -1.55
PTPDC1-203ENST00000467049 HRCT1Q6UXD1 115 aa5.38□□□□□ -1.55
PTPDC1-203ENST00000467049 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
PTPDC1-203ENST00000467049 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 TSPEAR-AS2P59090 65 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 KRTAP11-1Q8IUC1 163 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 C3orf22Q8N5N4 141 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 UQCRQO14949 82 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 NDUFA1O15239 70 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 SMCPP49901 116 aaPredicted RBP5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 PRO1854Q9UHT4 67 aa5.37□□□□□ -1.55
PTPDC1-203ENST00000467049 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
PTPDC1-203ENST00000467049 C9orf153Q5TBE3 101 aa5.36□□□□□ -1.55
PTPDC1-203ENST00000467049 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
PTPDC1-203ENST00000467049 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
PTPDC1-203ENST00000467049 TIMM17BO60830 172 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 C1orf195Q5TG92 126 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 CFC1BP0CG36 223 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 CFC1P0CG37 223 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 PSMB2P49721 201 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 COPS9Q8WXC6 57 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.55
PTPDC1-203ENST00000467049 UBE2BP63146 152 aa5.33□□□□□ -1.56
PTPDC1-203ENST00000467049 UNQ6190/PRO20217Q6UXQ8 127 aa5.33□□□□□ -1.56
PTPDC1-203ENST00000467049 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
PTPDC1-203ENST00000467049 IGLV5-45A0A087WSX0 123 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 SCGB1C2P0DMR2 95 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 CRYGAP11844 174 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 TRBV30A0A0K0K1B3 111 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 TMEM258P61165 79 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 C4orf48Q5BLP8 95 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM19A1Q7Z5A9 133 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
PTPDC1-203ENST00000467049 TRBV7-7A0A0K0K1E9 115 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 ZNF861PO60384 105 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 MUSTN1Q8IVN3 82 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
PTPDC1-203ENST00000467049 TCL1BO95988 128 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 Q1RN00 199 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM236DA0A1B0GTK5 79 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 COX6CP09669 75 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 FAM236CP0DP71 79 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 LITAFQ99732 161 aa5.3□□□□□ -1.56
PTPDC1-203ENST00000467049 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
PTPDC1-203ENST00000467049 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
PTPDC1-203ENST00000467049 IGLV5-39A0A0G2JS06 123 aa5.28□□□□□ -1.56
PTPDC1-203ENST00000467049 PRSS2P07478 247 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms