RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
PSME4-204ENST00000466539 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
PSME4-204ENST00000466539 Q6ZSA8 131 aa3.89□□□□□ -1.79
PSME4-204ENST00000466539 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
PSME4-204ENST00000466539 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
PSME4-204ENST00000466539 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
PSME4-204ENST00000466539 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.88□□□□□ -1.79
PSME4-204ENST00000466539 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
PSME4-204ENST00000466539 PSCAO43653 123 aa3.88□□□□□ -1.79
PSME4-204ENST00000466539 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
PSME4-204ENST00000466539 PFN2P35080 140 aa3.88□□□□□ -1.79
PSME4-204ENST00000466539 LINC00158P58513 81 aa3.88□□□□□ -1.79
PSME4-204ENST00000466539 A0A096LNI7 61 aa3.87□□□□□ -1.79
PSME4-204ENST00000466539 PANO1I0J062 215 aa3.87□□□□□ -1.79
PSME4-204ENST00000466539 COL5A1-AS1Q5SY13 56 aa3.87□□□□□ -1.79
PSME4-204ENST00000466539 LINC00336Q6ZUF6 198 aa3.87□□□□□ -1.79
PSME4-204ENST00000466539 SPACA4Q8TDM5 124 aa3.87□□□□□ -1.79
PSME4-204ENST00000466539 A0A087X002 238 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 A6NDN8 102 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 KRTAP4-16G5E9R7 235 aaPredicted RBP3.86□□□□□ -1.79
PSME4-204ENST00000466539 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
PSME4-204ENST00000466539 PRO1854Q9UHT4 67 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 PKIGQ9Y2B9 76 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 FAT1Q14517 4588 aa3.86□□□□□ -1.79
PSME4-204ENST00000466539 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 TRAV13-2A0A0B4J235 113 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 A0A1W2PNN7 141 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 K7ERJ3 54 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 TSPAN13O95857 204 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 SPRR1AP35321 89 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 RPL28P46779 137 aaKnown RBP3.85□□□□□ -1.79
PSME4-204ENST00000466539 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
PSME4-204ENST00000466539 HSPG2P98160 4391 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.84□□□□□ -1.79
PSME4-204ENST00000466539 M0R378 163 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 NPC2P61916 151 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 PRR3P79522 188 aaKnown RBP3.84□□□□□ -1.79
PSME4-204ENST00000466539 LINC01600Q96MT4 127 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 KCNQ1DNQ9H478 68 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 LINC00474Q9P2X8 69 aa3.84□□□□□ -1.79
PSME4-204ENST00000466539 EPPK1P58107 5090 aaKnown RBP3.84□□□□□ -1.8
PSME4-204ENST00000466539 IGLV1-50A0A075B6I6 118 aa3.83□□□□□ -1.8
PSME4-204ENST00000466539 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
PSME4-204ENST00000466539 FAM168BA1KXE4 195 aa3.83□□□□□ -1.8
PSME4-204ENST00000466539 TMEM126AQ9H061 195 aa3.83□□□□□ -1.8
PSME4-204ENST00000466539 TRBV10-3A0A0K0K1G6 114 aa3.82□□□□□ -1.8
PSME4-204ENST00000466539 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
PSME4-204ENST00000466539 RPL18AQ02543 176 aaKnown RBP3.82□□□□□ -1.8
PSME4-204ENST00000466539 C7orf33Q8WU49 177 aa3.82□□□□□ -1.8
PSME4-204ENST00000466539 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
PSME4-204ENST00000466539 RYR1P21817 5038 aa3.82□□□□□ -1.8
PSME4-204ENST00000466539 PCLOQ9Y6V0 5065 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 A0A1W2PPM0 123 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 RPL13AP40429 203 aaKnown RBP3.81□□□□□ -1.8
PSME4-204ENST00000466539 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 BATFQ16520 125 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
PSME4-204ENST00000466539 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 SMIM11BQ8TCY0 68 aa3.81□□□□□ -1.8
PSME4-204ENST00000466539 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
PSME4-204ENST00000466539 RAB37Q96AX2 223 aa3.8□□□□□ -1.8
PSME4-204ENST00000466539 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
PSME4-204ENST00000466539 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 A0A1B0GX51 115 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 H0Y9J4 135 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 H3BUT2 72 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 LST1O00453 97 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 NCR3O14931 201 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 FUSP35637 526 aaKnown RBP eCLIP3.79□□□□□ -1.8
PSME4-204ENST00000466539 ELOF1P60002 83 aaKnown RBP3.79□□□□□ -1.8
PSME4-204ENST00000466539 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
PSME4-204ENST00000466539 TRBV20-1A0A075B6N2 111 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 TRAV23DV6A0A075B6W5 121 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 IGKV2-24A0A0C4DH68 120 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 A0A1B0GV90 55 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 H0YGX0 51 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 K7EP34 96 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 M0QXV9 152 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
PSME4-204ENST00000466539 TCL1BO95988 128 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 CIRBP-AS1Q8TBR5 109 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 PRO0461Q9UI25 63 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 CBY1Q9Y3M2 126 aa3.78□□□□□ -1.8
PSME4-204ENST00000466539 TRACP01848 142 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 INAFM2P0DMQ5 153 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 XGP55808 180 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 LINC00575Q6W349 94 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 SCXQ7RTU7 201 aa3.77□□□□□ -1.81
PSME4-204ENST00000466539 PHF5AQ7RTV0 110 aaKnown RBP3.77□□□□□ -1.81
PSME4-204ENST00000466539 FAM19A5Q7Z5A7 132 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms