RNA–Protein interactions for RNA: ENST00000466247.1

RBM6-215, Transcript of RNA binding motif protein 6, human

TSL 2

Gene RBM6, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM6-215	ENST00000466247	COMMD3	Q9UBI1	195 aa		0.93	□□□□□ -2.26
RBM6-215	ENST00000466247	EPDR1	Q9UM22	224 aa		0.93	□□□□□ -2.26
RBM6-215	ENST00000466247	TRBV25-1	A0A075B6N4	114 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	IGHV1-58	A0A0C4DH39	117 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	IGKV3D-7	A0A0C4DH55	119 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	TSTD3	H0UI37	97 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247		H3BQ15	152 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	BCE1	O60756	84 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	HYPM	O75409	117 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	TCL1B	O95988	128 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	CFD	P00746	253 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	MT1B	P07438	61 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	NMB	P08949	121 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	S100A11	P31949	105 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	S100A10	P60903	97 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	WHAMMP3	Q1A5X7	153 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	CANT1	Q8WVQ1	401 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	PYDC1	Q8WXC3	89 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	BORCS5	Q969J3	196 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	CCDC32	Q9BV29	185 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247	NAT8B	Q9UHF3	227 aa		0.92	□□□□□ -2.26
RBM6-215	ENST00000466247		A8MWV9	139 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247		F6UZH7	168 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	ARPC5	O15511	151 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	IGLC2	P0DOY2	106 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	GNG2	P59768	71 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	PATE2	Q6UY27	113 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	LINC00305	Q7Z4B0	112 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	AQP10	Q96PS8	301 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	NAA60	Q9H7X0	242 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	NIT2	Q9NQR4	276 aa		0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	PAIP2B	Q9ULR5	123 aa	Known RBP	0.91	□□□□□ -2.26
RBM6-215	ENST00000466247	TRBV20-1	A0A075B6N2	111 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	FXYD6-FXYD2	A0A087WZ82	144 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TRAV21	A0A0B4J279	112 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	IGHV1-24	A0A0C4DH33	117 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TRBV10-1	A0A0K0K1A3	114 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TRBV6-1	A0A0K0K1D8	114 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TRDV1	A0A1B0GX56	115 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TIMM17B	O60830	172 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	IL5	P05113	134 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	RNASE3	P12724	160 aa	Known RBP	0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	RPS29	P62273	56 aa	Known RBP	0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	PRLH	P81277	87 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	IZUMO2	Q6UXV1	221 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	CYP2G1P	Q6ZSU1	146 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	PRR15	Q8IV56	129 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	TP53RK	Q96S44	253 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	SLC25A21	Q9BQT8	299 aa	Predicted RBP	0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	ATG5	Q9H1Y0	275 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	HSPB11	Q9Y547	144 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247		U3KQ87	197 aa		0.9	□□□□□ -2.27
RBM6-215	ENST00000466247	CCL25	O15444	150 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	EDF1	O60869	148 aa	Known RBP	0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	ROMO1	P60602	79 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	RAB4B	P61018	213 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	HBB	P68871	147 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	RBM3	P98179	157 aa	Known RBP	0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	ZNF56	Q15929	161 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	IQCJ	Q1A5X6	159 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	SPANXN5	Q5MJ07	72 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247		Q5VV11	94 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	NHP2	Q9NX24	153 aa	Known RBP	0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	OR5AC2	Q9NZP5	309 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	C22orf24	Q9Y442	160 aa		0.89	□□□□□ -2.27
RBM6-215	ENST00000466247	CST7	O76096	145 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	TCRA	P04437	139 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	BAALC-AS2	P0C853	105 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	PYY	P10082	97 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	IAPP	P10997	89 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	FABP2	P12104	132 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	SPAG11B	Q08648	103 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	CROCCP2	Q86T23	111 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	DEFB107A	Q8IZN7	70 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	TMEM229B	Q8NBD8	167 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	CHCHD1	Q96BP2	118 aa	Known RBP	0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	LAMTOR3	Q9UHA4	124 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	SNURF	Q9Y675	71 aa		0.88	□□□□□ -2.27
RBM6-215	ENST00000466247	C3orf85	A0A1B0GTC6	90 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247		H3BVH4	76 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	HIST1H2BK	O60814	126 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	HIST1H2BJ	P06899	126 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	SCGB1A1	P11684	91 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	SDC2	P34741	201 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	FOXA3	P55318	350 aa	Predicted RBP	0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	RPS28	P62857	69 aa	Known RBP	0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	PDE6H	Q13956	83 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	C10orf113	Q5VZT2	155 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247		Q5XG85	94 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	ATP11AUN	Q6ZP68	121 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	SPRR4	Q96PI1	79 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	SCN3B	Q9NY72	215 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	MRPL35	Q9NZE8	188 aa	Known RBP	0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	C6orf48	Q9UBA6	75 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	LAMTOR2	Q9Y2Q5	125 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	LENEP	Q9Y5L5	61 aa		0.87	□□□□□ -2.27
RBM6-215	ENST00000466247	TRAV12-1	A0A0B4J245	112 aa		0.86	□□□□□ -2.27
RBM6-215	ENST00000466247	LINC00959	A0A1B0GUT2	108 aa		0.86	□□□□□ -2.27
RBM6-215	ENST00000466247	IFITM5	A6NNB3	132 aa		0.86	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms