RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 USP24Q9UPU5 2620 aa6.04□□□□□ -1.44
SCAF11-205ENST00000465950 TRAV7A0A075B6U4 112 aa6.04□□□□□ -1.44
SCAF11-205ENST00000465950 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
SCAF11-205ENST00000465950 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
SCAF11-205ENST00000465950 FAM168BA1KXE4 195 aa6.03□□□□□ -1.44
SCAF11-205ENST00000465950 MAST4O15021 2626 aa6.02□□□□□ -1.45
SCAF11-205ENST00000465950 A0A1B0GVX0 72 aa6.02□□□□□ -1.45
SCAF11-205ENST00000465950 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
SCAF11-205ENST00000465950 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
SCAF11-205ENST00000465950 TSPEAR-AS2P59090 65 aa6□□□□□ -1.45
SCAF11-205ENST00000465950 WFDC2Q14508 124 aa6□□□□□ -1.45
SCAF11-205ENST00000465950 C9orf129Q5T035 196 aaKnown RBP6□□□□□ -1.45
SCAF11-205ENST00000465950 CR1P17927 2039 aa5.99□□□□□ -1.45
SCAF11-205ENST00000465950 PCOTHQ58A44 107 aa5.99□□□□□ -1.45
SCAF11-205ENST00000465950 ITPR3Q14573 2671 aa5.98□□□□□ -1.45
SCAF11-205ENST00000465950 FLNAP21333 2647 aaKnown RBP5.98□□□□□ -1.45
SCAF11-205ENST00000465950 SETXQ7Z333 2677 aaKnown RBP5.98□□□□□ -1.45
SCAF11-205ENST00000465950 DEFB116Q30KQ4 102 aa5.97□□□□□ -1.45
SCAF11-205ENST00000465950 C8orf17Q9NRJ1 99 aa5.97□□□□□ -1.45
SCAF11-205ENST00000465950 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
SCAF11-205ENST00000465950 IGFL1Q6UW32 110 aa5.96□□□□□ -1.45
SCAF11-205ENST00000465950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.45
SCAF11-205ENST00000465950 ATRQ13535 2644 aa5.96□□□□□ -1.45
SCAF11-205ENST00000465950 DSCR10P59022 87 aa5.96□□□□□ -1.46
SCAF11-205ENST00000465950 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
SCAF11-205ENST00000465950 CFAP46Q8IYW2 2715 aa5.94□□□□□ -1.46
SCAF11-205ENST00000465950 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
SCAF11-205ENST00000465950 STAB1Q9NY15 2570 aa5.93□□□□□ -1.46
SCAF11-205ENST00000465950 EP400Q96L91 3159 aa5.93□□□□□ -1.46
SCAF11-205ENST00000465950 IGLV8-61A0A075B6I0 122 aa5.91□□□□□ -1.46
SCAF11-205ENST00000465950 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
SCAF11-205ENST00000465950 A0A1B0GU69 56 aa5.91□□□□□ -1.46
SCAF11-205ENST00000465950 Q6ZQT0 140 aa5.91□□□□□ -1.46
SCAF11-205ENST00000465950 A6NED7 52 aa5.91□□□□□ -1.46
SCAF11-205ENST00000465950 A8MUN3 132 aa5.91□□□□□ -1.46
SCAF11-205ENST00000465950 PRR15Q8IV56 129 aa5.9□□□□□ -1.46
SCAF11-205ENST00000465950 K7EQZ3 153 aa5.9□□□□□ -1.46
SCAF11-205ENST00000465950 SMIM26A0A096LP01 95 aa5.89□□□□□ -1.47
SCAF11-205ENST00000465950 A0A096LNJ9 63 aa5.89□□□□□ -1.47
SCAF11-205ENST00000465950 URB1-AS1Q96HZ7 61 aa5.88□□□□□ -1.47
SCAF11-205ENST00000465950 PCP4P48539 62 aa5.88□□□□□ -1.47
SCAF11-205ENST00000465950 KRTAP10-2P60368 255 aa5.88□□□□□ -1.47
SCAF11-205ENST00000465950 YPEL4Q96NS1 127 aa5.87□□□□□ -1.47
SCAF11-205ENST00000465950 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
SCAF11-205ENST00000465950 UNC79Q9P2D8 2635 aa5.85□□□□□ -1.47
SCAF11-205ENST00000465950 SOSTDC1Q6X4U4 206 aa5.83□□□□□ -1.48
SCAF11-205ENST00000465950 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
SCAF11-205ENST00000465950 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
SCAF11-205ENST00000465950 COX7CP15954 63 aa5.83□□□□□ -1.48
SCAF11-205ENST00000465950 Q8N377 158 aa5.82□□□□□ -1.48
SCAF11-205ENST00000465950 SPRR1BP22528 89 aa5.81□□□□□ -1.48
SCAF11-205ENST00000465950 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
SCAF11-205ENST00000465950 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
SCAF11-205ENST00000465950 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
SCAF11-205ENST00000465950 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
SCAF11-205ENST00000465950 IGLV5-48A0A075B6I7 105 aa5.79□□□□□ -1.48
SCAF11-205ENST00000465950 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
SCAF11-205ENST00000465950 FAM104AQ969W3 186 aa5.78□□□□□ -1.48
SCAF11-205ENST00000465950 GCN1Q92616 2671 aaKnown RBP5.77□□□□□ -1.49
SCAF11-205ENST00000465950 COL6A5A8TX70 2615 aa5.76□□□□□ -1.49
SCAF11-205ENST00000465950 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
SCAF11-205ENST00000465950 KRTAP1-5Q9BYS1 174 aa5.76□□□□□ -1.49
SCAF11-205ENST00000465950 S4R3F8 94 aa5.76□□□□□ -1.49
SCAF11-205ENST00000465950 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
SCAF11-205ENST00000465950 TEP1Q99973 2627 aaKnown RBP5.74□□□□□ -1.49
SCAF11-205ENST00000465950 SPRR1AP35321 89 aa5.73□□□□□ -1.49
SCAF11-205ENST00000465950 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
SCAF11-205ENST00000465950 KMT2BQ9UMN6 2715 aaPredicted RBP5.71□□□□□ -1.49
SCAF11-205ENST00000465950 LINC00483Q53H64 154 aa5.71□□□□□ -1.49
SCAF11-205ENST00000465950 LITAFQ99732 161 aa5.71□□□□□ -1.5
SCAF11-205ENST00000465950 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
SCAF11-205ENST00000465950 GOLGB1Q14789 3259 aaKnown RBP5.7□□□□□ -1.5
SCAF11-205ENST00000465950 LINC00310P59036 64 aa5.69□□□□□ -1.5
SCAF11-205ENST00000465950 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
SCAF11-205ENST00000465950 ZNF292O60281 2723 aa5.68□□□□□ -1.5
SCAF11-205ENST00000465950 UTRNP46939 3433 aa5.68□□□□□ -1.5
SCAF11-205ENST00000465950 Q6ZRN7 208 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-205ENST00000465950 FAM218AQ96MZ4 157 aa5.68□□□□□ -1.5
SCAF11-205ENST00000465950 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-205ENST00000465950 C1orf195Q5TG92 126 aa5.67□□□□□ -1.5
SCAF11-205ENST00000465950 UQCR11O14957 56 aa5.66□□□□□ -1.5
SCAF11-205ENST00000465950 R4GN34 69 aa5.65□□□□□ -1.5
SCAF11-205ENST00000465950 SPINK7P58062 85 aa5.65□□□□□ -1.51
SCAF11-205ENST00000465950 WDR87Q6ZQQ6 2873 aa5.64□□□□□ -1.51
SCAF11-205ENST00000465950 A0A087WVE0 104 aa5.63□□□□□ -1.51
SCAF11-205ENST00000465950 WDFY3Q8IZQ1 3526 aa5.62□□□□□ -1.51
SCAF11-205ENST00000465950 IGSF10Q6WRI0 2623 aa5.62□□□□□ -1.51
SCAF11-205ENST00000465950 KRTAP26-1Q6PEX3 210 aa5.62□□□□□ -1.51
SCAF11-205ENST00000465950 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
SCAF11-205ENST00000465950 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
SCAF11-205ENST00000465950 NOTCH1P46531 2555 aa5.61□□□□□ -1.51
SCAF11-205ENST00000465950 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
SCAF11-205ENST00000465950 Q5XG85 94 aa5.59□□□□□ -1.51
SCAF11-205ENST00000465950 LCA10Q71F78 164 aa5.59□□□□□ -1.52
SCAF11-205ENST00000465950 Q75L30 129 aa5.59□□□□□ -1.52
SCAF11-205ENST00000465950 CHD6Q8TD26 2715 aa5.58□□□□□ -1.52
SCAF11-205ENST00000465950 SPANXA2-OT1Q8N9U9 137 aa5.57□□□□□ -1.52
SCAF11-205ENST00000465950 PANO1I0J062 215 aa5.56□□□□□ -1.52
SCAF11-205ENST00000465950 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
SCAF11-205ENST00000465950 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms