RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 UBE2BP63146 152 aa13.63□□□□□ -0.23
ITGA4-204ENST00000465522 Q6ZSA8 131 aa13.62□□□□□ -0.23
ITGA4-204ENST00000465522 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
ITGA4-204ENST00000465522 H0YGX0 51 aa13.6□□□□□ -0.23
ITGA4-204ENST00000465522 PRYO14603 147 aa13.6□□□□□ -0.23
ITGA4-204ENST00000465522 SPCS1Q9Y6A9 102 aa13.6□□□□□ -0.23
ITGA4-204ENST00000465522 CIRBP-AS1Q8TBR5 109 aa13.59□□□□□ -0.23
ITGA4-204ENST00000465522 CLEC2BQ92478 149 aa13.59□□□□□ -0.23
ITGA4-204ENST00000465522 TRBV20-1A0A075B6N2 111 aa13.58□□□□□ -0.24
ITGA4-204ENST00000465522 DNAH8Q96JB1 4490 aa13.58□□□□□ -0.24
ITGA4-204ENST00000465522 TCL1BO95988 128 aa13.57□□□□□ -0.24
ITGA4-204ENST00000465522 REG3GQ6UW15 175 aa13.57□□□□□ -0.24
ITGA4-204ENST00000465522 SCXQ7RTU7 201 aa13.56□□□□□ -0.24
ITGA4-204ENST00000465522 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
ITGA4-204ENST00000465522 TRBV7-6A0A0J9YX20 115 aa13.55□□□□□ -0.24
ITGA4-204ENST00000465522 GTF2H5Q6ZYL4 71 aa13.55□□□□□ -0.24
ITGA4-204ENST00000465522 K7EP34 96 aa13.54□□□□□ -0.24
ITGA4-204ENST00000465522 COX7BP24311 80 aa13.54□□□□□ -0.24
ITGA4-204ENST00000465522 SPRR1AP35321 89 aa13.54□□□□□ -0.24
ITGA4-204ENST00000465522 ATXN8Q156A1 80 aa13.53□□□□□ -0.24
ITGA4-204ENST00000465522 ETDCA0A1B0GVM5 59 aa13.53□□□□□ -0.24
ITGA4-204ENST00000465522 ELOF1P60002 83 aaKnown RBP13.53□□□□□ -0.24
ITGA4-204ENST00000465522 FAM218AQ96MZ4 157 aa13.52□□□□□ -0.25
ITGA4-204ENST00000465522 KRTAP4-16G5E9R7 235 aaPredicted RBP13.51□□□□□ -0.25
ITGA4-204ENST00000465522 H3BMG7 143 aa13.51□□□□□ -0.25
ITGA4-204ENST00000465522 LST1O00453 97 aa13.51□□□□□ -0.25
ITGA4-204ENST00000465522 HAMPP81172 84 aa13.51□□□□□ -0.25
ITGA4-204ENST00000465522 LRP1BQ9NZR2 4599 aa13.49□□□□□ -0.25
ITGA4-204ENST00000465522 B5MCH6 92 aa13.48□□□□□ -0.25
ITGA4-204ENST00000465522 LINC00575Q6W349 94 aa13.48□□□□□ -0.25
ITGA4-204ENST00000465522 SNCGO76070 127 aa13.47□□□□□ -0.25
ITGA4-204ENST00000465522 UBE2V1Q13404 147 aa13.47□□□□□ -0.25
ITGA4-204ENST00000465522 LINC00528Q8N1L1 170 aa13.47□□□□□ -0.25
ITGA4-204ENST00000465522 SLC25A20O43772 301 aa13.47□□□□□ -0.25
ITGA4-204ENST00000465522 FAM19A1Q7Z5A9 133 aa13.47□□□□□ -0.25
ITGA4-204ENST00000465522 Q6ZRX8 168 aa13.46□□□□□ -0.25
ITGA4-204ENST00000465522 A0A1B0GX51 115 aa13.45□□□□□ -0.26
ITGA4-204ENST00000465522 hADV29S1A0JD25 119 aa13.45□□□□□ -0.26
ITGA4-204ENST00000465522 DYNC1H1Q14204 4646 aaKnown RBP13.45□□□□□ -0.26
ITGA4-204ENST00000465522 TRACP01848 142 aa13.44□□□□□ -0.26
ITGA4-204ENST00000465522 PSORS1C2Q9UIG4 136 aa13.44□□□□□ -0.26
ITGA4-204ENST00000465522 BCE1O60756 84 aa13.43□□□□□ -0.26
ITGA4-204ENST00000465522 DNAL4O96015 105 aa13.43□□□□□ -0.26
ITGA4-204ENST00000465522 INAFM2P0DMQ5 153 aa13.42□□□□□ -0.26
ITGA4-204ENST00000465522 PRLHP81277 87 aa13.41□□□□□ -0.26
ITGA4-204ENST00000465522 DHRS4-AS1Q9P1J3 65 aa13.41□□□□□ -0.26
ITGA4-204ENST00000465522 C9JAW5 83 aa13.4□□□□□ -0.26
ITGA4-204ENST00000465522 UBE2AP49459 152 aa13.4□□□□□ -0.26
ITGA4-204ENST00000465522 XGP55808 180 aa13.4□□□□□ -0.26
ITGA4-204ENST00000465522 Q9BRP9 147 aa13.4□□□□□ -0.26
ITGA4-204ENST00000465522 C1orf137Q5JT78 98 aa13.39□□□□□ -0.27
ITGA4-204ENST00000465522 MTURNQ8N3F0 131 aa13.39□□□□□ -0.27
ITGA4-204ENST00000465522 H0Y9J4 135 aa13.38□□□□□ -0.27
ITGA4-204ENST00000465522 HIGD2AQ9BW72 106 aa13.36□□□□□ -0.27
ITGA4-204ENST00000465522 Q6ZQY7 126 aa13.35□□□□□ -0.27
ITGA4-204ENST00000465522 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
ITGA4-204ENST00000465522 F8W1H4 67 aa13.33□□□□□ -0.27
ITGA4-204ENST00000465522 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.33□□□□□ -0.28
ITGA4-204ENST00000465522 KRTAP13-1Q8IUC0 172 aa13.33□□□□□ -0.28
ITGA4-204ENST00000465522 ORMDL1Q9P0S3 153 aa13.33□□□□□ -0.28
ITGA4-204ENST00000465522 PRO0461Q9UI25 63 aa13.33□□□□□ -0.28
ITGA4-204ENST00000465522 ERC2-IT1O76042 136 aa13.32□□□□□ -0.28
ITGA4-204ENST00000465522 BAALC-AS2P0C853 105 aa13.32□□□□□ -0.28
ITGA4-204ENST00000465522 SRRM2Q9UQ35 2752 aaKnown RBP13.31□□□□□ -0.28
ITGA4-204ENST00000465522 IGLV7-43P04211 117 aa13.3□□□□□ -0.28
ITGA4-204ENST00000465522 SMR3BP02814 79 aaPredicted RBP13.29□□□□□ -0.28
ITGA4-204ENST00000465522 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
ITGA4-204ENST00000465522 ANKRD29Q8N6D5 301 aa13.29□□□□□ -0.28
ITGA4-204ENST00000465522 APOBP04114 4563 aaKnown RBP13.29□□□□□ -0.28
ITGA4-204ENST00000465522 ZNF861PO60384 105 aa13.28□□□□□ -0.28
ITGA4-204ENST00000465522 SMCPP49901 116 aaPredicted RBP13.28□□□□□ -0.28
ITGA4-204ENST00000465522 H3BT86 120 aa13.27□□□□□ -0.28
ITGA4-204ENST00000465522 GHRHP01286 108 aa13.27□□□□□ -0.29
ITGA4-204ENST00000465522 TMEM256-PLSCR3K7ERE1 68 aa13.26□□□□□ -0.29
ITGA4-204ENST00000465522 ST20-AS1Q8NBB2 130 aa13.26□□□□□ -0.29
ITGA4-204ENST00000465522 DEFB105AQ8NG35 78 aa13.26□□□□□ -0.29
ITGA4-204ENST00000465522 VPS13BQ7Z7G8 4022 aa13.25□□□□□ -0.29
ITGA4-204ENST00000465522 H3BQ85 93 aa13.24□□□□□ -0.29
ITGA4-204ENST00000465522 CDK2AP2O75956 126 aa13.22□□□□□ -0.29
ITGA4-204ENST00000465522 RPL37AP61513 92 aaKnown RBP13.22□□□□□ -0.29
ITGA4-204ENST00000465522 LINC01600Q96MT4 127 aa13.22□□□□□ -0.29
ITGA4-204ENST00000465522 LINC01547P58512 204 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-204ENST00000465522 IGLV5-48A0A075B6I7 105 aa13.19□□□□□ -0.3
ITGA4-204ENST00000465522 Q8N377 158 aa13.19□□□□□ -0.3
ITGA4-204ENST00000465522 ETDBQ3ZM63 59 aa13.18□□□□□ -0.3
ITGA4-204ENST00000465522 PPDPFLQ8WWR9 84 aa13.18□□□□□ -0.3
ITGA4-204ENST00000465522 TEX49A0A1B0GTD5 131 aa13.17□□□□□ -0.3
ITGA4-204ENST00000465522 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
ITGA4-204ENST00000465522 GAGE2AQ6NT46 116 aa13.16□□□□□ -0.3
ITGA4-204ENST00000465522 LAMTOR3Q9UHA4 124 aa13.16□□□□□ -0.3
ITGA4-204ENST00000465522 TEN1Q86WV5 123 aa13.14□□□□□ -0.31
ITGA4-204ENST00000465522 ZNF706Q9Y5V0 76 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-204ENST00000465522 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
ITGA4-204ENST00000465522 SPRR4Q96PI1 79 aa13.12□□□□□ -0.31
ITGA4-204ENST00000465522 FAM229AH3BQW9 127 aa13.1□□□□□ -0.31
ITGA4-204ENST00000465522 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
ITGA4-204ENST00000465522 A0A1B0GV72 72 aa13.1□□□□□ -0.31
ITGA4-204ENST00000465522 SPRR1BP22528 89 aa13.1□□□□□ -0.31
ITGA4-204ENST00000465522 FAT1Q14517 4588 aa13.09□□□□□ -0.31
ITGA4-204ENST00000465522 JMJD7-PLA2G4BH0Y9G9 81 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms