RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
HLA-F-223ENST00000465459 H0Y9J4 135 aa9□□□□□ -0.97
HLA-F-223ENST00000465459 ZNF73O43830 326 aaPredicted RBP9□□□□□ -0.97
HLA-F-223ENST00000465459 ZNF861PO60384 105 aa9□□□□□ -0.97
HLA-F-223ENST00000465459 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
HLA-F-223ENST00000465459 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 CFC1BP0CG36 223 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 CFC1P0CG37 223 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 UBE2AP49459 152 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 FXYD2P54710 66 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
HLA-F-223ENST00000465459 SRRM2Q9UQ35 2752 aaKnown RBP8.98□□□□□ -0.97
HLA-F-223ENST00000465459 HINT1P49773 126 aaPredicted RBP8.98□□□□□ -0.97
HLA-F-223ENST00000465459 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
HLA-F-223ENST00000465459 RAB37Q96AX2 223 aa8.98□□□□□ -0.97
HLA-F-223ENST00000465459 DIRC1Q969H9 104 aa8.97□□□□□ -0.97
HLA-F-223ENST00000465459 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
HLA-F-223ENST00000465459 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
HLA-F-223ENST00000465459 M0R143 59 aa8.96□□□□□ -0.98
HLA-F-223ENST00000465459 CTAG1AP78358 180 aa8.96□□□□□ -0.98
HLA-F-223ENST00000465459 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
HLA-F-223ENST00000465459 B5MCH6 92 aa8.95□□□□□ -0.98
HLA-F-223ENST00000465459 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
HLA-F-223ENST00000465459 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
HLA-F-223ENST00000465459 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
HLA-F-223ENST00000465459 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
HLA-F-223ENST00000465459 PRLHP81277 87 aa8.94□□□□□ -0.98
HLA-F-223ENST00000465459 C6orf99Q4VX62 202 aa8.94□□□□□ -0.98
HLA-F-223ENST00000465459 Q6ZRX8 168 aa8.94□□□□□ -0.98
HLA-F-223ENST00000465459 SMIM11BQ8TCY0 68 aa8.94□□□□□ -0.98
HLA-F-223ENST00000465459 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
HLA-F-223ENST00000465459 COX7BP24311 80 aa8.91□□□□□ -0.98
HLA-F-223ENST00000465459 ELOF1P60002 83 aaKnown RBP8.91□□□□□ -0.98
HLA-F-223ENST00000465459 VAMP3Q15836 100 aa8.91□□□□□ -0.98
HLA-F-223ENST00000465459 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
HLA-F-223ENST00000465459 DHRS4-AS1Q9P1J3 65 aa8.9□□□□□ -0.98
HLA-F-223ENST00000465459 H7C2G1 150 aa8.88□□□□□ -0.99
HLA-F-223ENST00000465459 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
HLA-F-223ENST00000465459 Q9BRP9 147 aa8.88□□□□□ -0.99
HLA-F-223ENST00000465459 Q1RN00 199 aa8.87□□□□□ -0.99
HLA-F-223ENST00000465459 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
HLA-F-223ENST00000465459 K7ERJ3 54 aa8.86□□□□□ -0.99
HLA-F-223ENST00000465459 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
HLA-F-223ENST00000465459 H0YGX0 51 aa8.85□□□□□ -0.99
HLA-F-223ENST00000465459 OXTP01178 125 aa8.84□□□□□ -0.99
HLA-F-223ENST00000465459 SLC25A20O43772 301 aa8.83□□□□□ -1
HLA-F-223ENST00000465459 ERC2-IT1O76042 136 aa8.82□□□□□ -1
HLA-F-223ENST00000465459 TSPAN13O95857 204 aa8.82□□□□□ -1
HLA-F-223ENST00000465459 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
HLA-F-223ENST00000465459 LINC00575Q6W349 94 aa8.82□□□□□ -1
HLA-F-223ENST00000465459 SPRR4Q96PI1 79 aa8.82□□□□□ -1
HLA-F-223ENST00000465459 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
HLA-F-223ENST00000465459 COX6CP09669 75 aa8.81□□□□□ -1
HLA-F-223ENST00000465459 LINC01600Q96MT4 127 aa8.81□□□□□ -1
HLA-F-223ENST00000465459 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
HLA-F-223ENST00000465459 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
HLA-F-223ENST00000465459 TRIAP1O43715 76 aa8.8□□□□□ -1
HLA-F-223ENST00000465459 SNCGO76070 127 aa8.8□□□□□ -1
HLA-F-223ENST00000465459 PSMB2P49721 201 aa8.8□□□□□ -1
HLA-F-223ENST00000465459 BATFQ16520 125 aa8.8□□□□□ -1
HLA-F-223ENST00000465459 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
HLA-F-223ENST00000465459 hADV29S1A0JD25 119 aa8.79□□□□□ -1
HLA-F-223ENST00000465459 A0A1B0GX51 115 aa8.78□□□□□ -1
HLA-F-223ENST00000465459 LINC00483Q53H64 154 aa8.78□□□□□ -1
HLA-F-223ENST00000465459 CRYGAP11844 174 aa8.76□□□□□ -1.01
HLA-F-223ENST00000465459 SPRR1BP22528 89 aa8.76□□□□□ -1.01
HLA-F-223ENST00000465459 SNHG12Q9BXW3 62 aa8.76□□□□□ -1.01
HLA-F-223ENST00000465459 PCP4L1A6NKN8 68 aa8.75□□□□□ -1.01
HLA-F-223ENST00000465459 GAGE2AQ6NT46 116 aa8.75□□□□□ -1.01
HLA-F-223ENST00000465459 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.75□□□□□ -1.01
HLA-F-223ENST00000465459 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
HLA-F-223ENST00000465459 IGLV5-48A0A075B6I7 105 aa8.74□□□□□ -1.01
HLA-F-223ENST00000465459 MYCBP2O75592 4640 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 SCGB1C2P0DMR2 95 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 OCIAD2Q56VL3 154 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 FAM218AQ96MZ4 157 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
HLA-F-223ENST00000465459 LYRM7Q5U5X0 104 aa8.72□□□□□ -1.01
HLA-F-223ENST00000465459 Q6ZQY7 126 aa8.72□□□□□ -1.01
HLA-F-223ENST00000465459 PRR26Q8N8Z3 221 aa8.72□□□□□ -1.01
HLA-F-223ENST00000465459 A0A087X002 238 aa8.71□□□□□ -1.02
HLA-F-223ENST00000465459 GHRHP01286 108 aa8.71□□□□□ -1.02
HLA-F-223ENST00000465459 COL5A1-AS1Q5SY13 56 aa8.71□□□□□ -1.02
HLA-F-223ENST00000465459 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
HLA-F-223ENST00000465459 CLEC2BQ92478 149 aa8.71□□□□□ -1.02
HLA-F-223ENST00000465459 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 J3QL48 77 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 MT1HL1P0DM35 61 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 LINC01547P58512 204 aaPredicted RBP8.7□□□□□ -1.02
HLA-F-223ENST00000465459 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
HLA-F-223ENST00000465459 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
HLA-F-223ENST00000465459 LAMTOR3Q9UHA4 124 aa8.69□□□□□ -1.02
HLA-F-223ENST00000465459 H3BQ85 93 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 LST1O00453 97 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 DNAL4O96015 105 aa8.68□□□□□ -1.02
HLA-F-223ENST00000465459 TRACP01848 142 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms