RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
CPSF4-209ENST00000465132 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-209ENST00000465132 Q8NDZ9 215 aa10.76□□□□□ -0.69
CPSF4-209ENST00000465132 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
CPSF4-209ENST00000465132 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-209ENST00000465132 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
CPSF4-209ENST00000465132 CEND1Q8N111 149 aa10.75□□□□□ -0.69
CPSF4-209ENST00000465132 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
CPSF4-209ENST00000465132 A4D1N5 150 aa10.74□□□□□ -0.69
CPSF4-209ENST00000465132 A6NDN8 102 aa10.74□□□□□ -0.69
CPSF4-209ENST00000465132 BCE1O60756 84 aa10.74□□□□□ -0.69
CPSF4-209ENST00000465132 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
CPSF4-209ENST00000465132 RPL28P46779 137 aaKnown RBP10.73□□□□□ -0.69
CPSF4-209ENST00000465132 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
CPSF4-209ENST00000465132 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
CPSF4-209ENST00000465132 IGLV7-43P04211 117 aa10.71□□□□□ -0.69
CPSF4-209ENST00000465132 TNXBP22105 4242 aa10.71□□□□□ -0.69
CPSF4-209ENST00000465132 UBE2AP49459 152 aa10.71□□□□□ -0.69
CPSF4-209ENST00000465132 RAB37Q96AX2 223 aa10.71□□□□□ -0.69
CPSF4-209ENST00000465132 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
CPSF4-209ENST00000465132 M0R143 59 aa10.69□□□□□ -0.7
CPSF4-209ENST00000465132 SPINK6Q6UWN8 80 aa10.69□□□□□ -0.7
CPSF4-209ENST00000465132 H0Y9J4 135 aa10.68□□□□□ -0.7
CPSF4-209ENST00000465132 ZNF73O43830 326 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-209ENST00000465132 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
CPSF4-209ENST00000465132 LINC01600Q96MT4 127 aa10.68□□□□□ -0.7
CPSF4-209ENST00000465132 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
CPSF4-209ENST00000465132 ZNF861PO60384 105 aa10.67□□□□□ -0.7
CPSF4-209ENST00000465132 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
CPSF4-209ENST00000465132 DIRC1Q969H9 104 aa10.67□□□□□ -0.7
CPSF4-209ENST00000465132 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
CPSF4-209ENST00000465132 SPRR1AP35321 89 aa10.66□□□□□ -0.7
CPSF4-209ENST00000465132 VAMP3Q15836 100 aa10.66□□□□□ -0.7
CPSF4-209ENST00000465132 TRBV7-6A0A0J9YX20 115 aa10.65□□□□□ -0.7
CPSF4-209ENST00000465132 LRP2P98164 4655 aa10.65□□□□□ -0.7
CPSF4-209ENST00000465132 PRO1854Q9UHT4 67 aa10.64□□□□□ -0.71
CPSF4-209ENST00000465132 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
CPSF4-209ENST00000465132 CFC1P0CG37 223 aa10.63□□□□□ -0.71
CPSF4-209ENST00000465132 RPL13AP40429 203 aaKnown RBP10.63□□□□□ -0.71
CPSF4-209ENST00000465132 CTAG1AP78358 180 aa10.62□□□□□ -0.71
CPSF4-209ENST00000465132 FXYD2P54710 66 aa10.61□□□□□ -0.71
CPSF4-209ENST00000465132 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
CPSF4-209ENST00000465132 A0A1B0GWB2 263 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 COX7BP24311 80 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 Q1RN00 199 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 BVES-AS1Q5T3Y7 98 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 Q6ZRX8 168 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 DHRS4-AS1Q9P1J3 65 aa10.6□□□□□ -0.71
CPSF4-209ENST00000465132 B5MCH6 92 aa10.59□□□□□ -0.71
CPSF4-209ENST00000465132 KRTAP4-16G5E9R7 235 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-209ENST00000465132 SNCGO76070 127 aa10.59□□□□□ -0.71
CPSF4-209ENST00000465132 C6orf99Q4VX62 202 aa10.59□□□□□ -0.71
CPSF4-209ENST00000465132 SMIM11BQ8TCY0 68 aa10.59□□□□□ -0.71
CPSF4-209ENST00000465132 ZNF706Q9Y5V0 76 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-209ENST00000465132 KRTAP10-8P60410 259 aa10.58□□□□□ -0.72
CPSF4-209ENST00000465132 PRLHP81277 87 aa10.58□□□□□ -0.72
CPSF4-209ENST00000465132 SLC25A20O43772 301 aa10.57□□□□□ -0.72
CPSF4-209ENST00000465132 KRTAP13-1Q8IUC0 172 aa10.57□□□□□ -0.72
CPSF4-209ENST00000465132 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
CPSF4-209ENST00000465132 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
CPSF4-209ENST00000465132 H7C2G1 150 aa10.55□□□□□ -0.72
CPSF4-209ENST00000465132 H0YGX0 51 aa10.54□□□□□ -0.72
CPSF4-209ENST00000465132 COX6CP09669 75 aa10.54□□□□□ -0.72
CPSF4-209ENST00000465132 PSMB2P49721 201 aa10.51□□□□□ -0.73
CPSF4-209ENST00000465132 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
CPSF4-209ENST00000465132 K7ERJ3 54 aa10.48□□□□□ -0.73
CPSF4-209ENST00000465132 GHRHP01286 108 aa10.48□□□□□ -0.73
CPSF4-209ENST00000465132 BATFQ16520 125 aa10.47□□□□□ -0.73
CPSF4-209ENST00000465132 Q9BRP9 147 aa10.47□□□□□ -0.73
CPSF4-209ENST00000465132 FAM229BQ4G0N7 80 aa10.46□□□□□ -0.73
CPSF4-209ENST00000465132 A0A1B0GX51 115 aa10.45□□□□□ -0.74
CPSF4-209ENST00000465132 hADV29S1A0JD25 119 aa10.45□□□□□ -0.74
CPSF4-209ENST00000465132 LINC00575Q6W349 94 aa10.45□□□□□ -0.74
CPSF4-209ENST00000465132 TSPAN13O95857 204 aa10.44□□□□□ -0.74
CPSF4-209ENST00000465132 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
CPSF4-209ENST00000465132 SCGB1C2P0DMR2 95 aa10.43□□□□□ -0.74
CPSF4-209ENST00000465132 CRYGAP11844 174 aa10.43□□□□□ -0.74
CPSF4-209ENST00000465132 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
CPSF4-209ENST00000465132 TRIAP1O43715 76 aa10.42□□□□□ -0.74
CPSF4-209ENST00000465132 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
CPSF4-209ENST00000465132 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.4□□□□□ -0.74
CPSF4-209ENST00000465132 PCP4L1A6NKN8 68 aa10.39□□□□□ -0.75
CPSF4-209ENST00000465132 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
CPSF4-209ENST00000465132 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
CPSF4-209ENST00000465132 TEX49A0A1B0GTD5 131 aa10.38□□□□□ -0.75
CPSF4-209ENST00000465132 H3BQ85 93 aa10.38□□□□□ -0.75
CPSF4-209ENST00000465132 DNAL4O96015 105 aa10.38□□□□□ -0.75
CPSF4-209ENST00000465132 LINC00483Q53H64 154 aa10.38□□□□□ -0.75
CPSF4-209ENST00000465132 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
CPSF4-209ENST00000465132 KRTAP1-4P0C5Y4 121 aa10.37□□□□□ -0.75
CPSF4-209ENST00000465132 COL5A1-AS1Q5SY13 56 aa10.36□□□□□ -0.75
CPSF4-209ENST00000465132 LAMTOR3Q9UHA4 124 aa10.36□□□□□ -0.75
CPSF4-209ENST00000465132 SPRR1BP22528 89 aa10.35□□□□□ -0.75
CPSF4-209ENST00000465132 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
CPSF4-209ENST00000465132 Q6ZQY7 126 aa10.34□□□□□ -0.75
CPSF4-209ENST00000465132 ST20-AS1Q8NBB2 130 aa10.34□□□□□ -0.75
CPSF4-209ENST00000465132 DEFB105AQ8NG35 78 aa10.34□□□□□ -0.75
CPSF4-209ENST00000465132 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
CPSF4-209ENST00000465132 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
CPSF4-209ENST00000465132 LPAP08519 4548 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms