RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 CAMK2N2Q96S95 79 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 SND1-IT1Q9HBX3 110 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 STARD9Q9P2P6 4700 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 NCR3O14931 201 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.03
SCN3A-206ENST00000465043 MTURNQ8N3F0 131 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 LINC00337Q8N6G1 96 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 OR13C6PQ8NH95 151 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 RMI2Q96E14 147 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 XAGE1AQ9HD64 81 aa2.34□□□□□ -2.03
SCN3A-206ENST00000465043 TGP01266 2768 aa2.34□□□□□ -2.04
SCN3A-206ENST00000465043 DNAH1Q9P2D7 4330 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.33□□□□□ -2.04
SCN3A-206ENST00000465043 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
SCN3A-206ENST00000465043 NBDYA0A0U1RRE5 68 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 H3BMG7 143 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 PSCAO43653 123 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 TCL1BO95988 128 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 FUSP35637 526 aaKnown RBP eCLIP2.33□□□□□ -2.04
SCN3A-206ENST00000465043 SYCNQ0VAF6 134 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 COX17Q14061 63 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 GTF2H5Q6ZYL4 71 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 COPS9Q8WXC6 57 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 C2orf48Q96LS8 159 aa2.33□□□□□ -2.04
SCN3A-206ENST00000465043 CSMD3Q7Z407 3707 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 TRBV30A0A0K0K1B3 111 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 LY6G6CO95867 125 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 RPL18AQ02543 176 aaKnown RBP2.32□□□□□ -2.04
SCN3A-206ENST00000465043 SMIM11BQ8TCY0 68 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 CARD19Q96LW7 228 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 LYSTQ99698 3801 aa2.32□□□□□ -2.04
SCN3A-206ENST00000465043 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 TRAV13-2A0A0B4J235 113 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 FAM168BA1KXE4 195 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 C9JAW5 83 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 NDUFC2-KCTD14E9PQ53 114 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 LINC01620Q4KN68 170 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 TTC32Q5I0X7 151 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 S100A7L2Q5SY68 101 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 C9orf129Q5T035 196 aaKnown RBP2.31□□□□□ -2.04
SCN3A-206ENST00000465043 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-206ENST00000465043 FAM218AQ96MZ4 157 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 PPDPFQ9H3Y8 114 aa2.31□□□□□ -2.04
SCN3A-206ENST00000465043 TENM2Q9NT68 2774 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 TRBV20-1A0A075B6N2 111 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 IGKV2-24A0A0C4DH68 120 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 TRBV10-3A0A0K0K1G6 114 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 F8WDY8 70 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 NDUFC2O95298 119 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 COX6CP09669 75 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 RPL28P46779 137 aaKnown RBP2.3□□□□□ -2.04
SCN3A-206ENST00000465043 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 LYRM7Q5U5X0 104 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 DNAH10Q8IVF4 4471 aa2.3□□□□□ -2.04
SCN3A-206ENST00000465043 A0A087WTM6 91 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 A0A096LNI7 61 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 LOC107984640A0A0U1RRK4 108 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 RPL37AP8A6NKH3 93 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 M0R378 163 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 LST1O00453 97 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 TLX1NBP0CAT3 122 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 CHTF8P0CG12 524 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 ETDBQ3ZM63 59 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 C6orf99Q4VX62 202 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 FAM19A5Q7Z5A7 132 aaPredicted RBP2.29□□□□□ -2.04
SCN3A-206ENST00000465043 TYMSOSQ8TAI1 123 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 TMEM126AQ9H061 195 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 ALMS1Q8TCU4 4167 aa2.29□□□□□ -2.04
SCN3A-206ENST00000465043 DNAH6Q9C0G6 4158 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 A0A1W2PNN7 141 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 F8W1H4 67 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 C3orf84H3BNL1 204 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 SLC25A20O43772 301 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 IGLV6-57P01721 117 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 C1orf134Q5TEV5 83 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SCN3A-206ENST00000465043 ANKRD29Q8N6D5 301 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 Q8N814 137 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 NKAPP1Q8N9T2 125 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 ANAPC11Q9NYG5 84 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
SCN3A-206ENST00000465043 RYR3Q15413 4870 aa2.28□□□□□ -2.05
SCN3A-206ENST00000465043 HYDINQ4G0P3 5121 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 A0A1B0GV72 72 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 H0YGX0 51 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 PANO1I0J062 215 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
SCN3A-206ENST00000465043 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 BAALC-AS2P0C853 105 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 COX7BP24311 80 aa2.27□□□□□ -2.05
SCN3A-206ENST00000465043 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms