RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 ADGRG4Q8IZF6 3080 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 USP9YO00507 2555 aaPredicted RBP2.55□□□□□ -2
CCNL1-204ENST00000464316 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 DSCR10P59022 87 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 DEFB113Q30KQ7 82 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 C7orf65Q6ZTY9 151 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 ST20-AS1Q8NBB2 130 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
CCNL1-204ENST00000464316 ALMS1Q8TCU4 4167 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 USP9XQ93008 2570 aaPredicted RBP2.54□□□□□ -2
CCNL1-204ENST00000464316 RPL37AP8A6NKH3 93 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 TLN2Q9Y4G6 2542 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 CEP295Q9C0D2 2601 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 C16orf90A8MZG2 172 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 DEFB4AO15263 64 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 LCA10Q71F78 164 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 MGAQ8IWI9 3026 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 PLA2G2DQ9UNK4 145 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 KMT2AQ03164 3969 aa2.54□□□□□ -2
CCNL1-204ENST00000464316 TP53AIP1Q9HCN2 124 aa2.53□□□□□ -2
CCNL1-204ENST00000464316 FN1P02751 2386 aaKnown RBP2.53□□□□□ -2
CCNL1-204ENST00000464316 A0A087WSZ3 146 aa2.53□□□□□ -2
CCNL1-204ENST00000464316 H3BNG1 76 aa2.53□□□□□ -2
CCNL1-204ENST00000464316 COA5Q86WW8 74 aa2.53□□□□□ -2
CCNL1-204ENST00000464316 ACACBO00763 2458 aa2.53□□□□□ -2.01
CCNL1-204ENST00000464316 LINC00476Q8WZB0 136 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 H0Y9J4 135 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 CDK2AP2O75956 126 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 IGF2RP11717 2491 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 IGLV1-50A0A075B6I6 118 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 TNP2Q05952 138 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 PTPN13Q12923 2485 aa2.52□□□□□ -2.01
CCNL1-204ENST00000464316 IGLV7-46A0A075B6I9 117 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 TLX1NBP0CAT3 122 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 DEFB116Q30KQ4 102 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 A8MWP4 228 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 NAV2Q8IVL1 2488 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 IGLV5-37A0A075B6J1 123 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 LINC01558Q9Y6Z2 57 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 MUC6Q6W4X9 2439 aa2.51□□□□□ -2.01
CCNL1-204ENST00000464316 C15orf56Q8N910 161 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 VPS13DQ5THJ4 4388 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 CFAP47Q6ZTR5 3102 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 DMXL2Q8TDJ6 3036 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 SPRR1AP35321 89 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 LINC01556Q5JQF7 62 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 SPAG11AQ6PDA7 123 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 BOD1L1Q8NFC6 3051 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 A6NN06 94 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 CR1P17927 2039 aa2.5□□□□□ -2.01
CCNL1-204ENST00000464316 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 C4orf48Q5BLP8 95 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 Q8NAQ8 132 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 KRTAP3-3Q9BYR6 98 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 KRTAP3-2Q9BYR7 98 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 LRBAP50851 2863 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 FAM208BQ5VWN6 2430 aa2.49□□□□□ -2.01
CCNL1-204ENST00000464316 DOPEY1Q5JWR5 2465 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 KRTAP29-1A8MX34 341 aaPredicted RBP2.48□□□□□ -2.01
CCNL1-204ENST00000464316 IGLV8-61A0A075B6I0 122 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 ZFYVE26Q68DK2 2539 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 KRTAP4-16G5E9R7 235 aaPredicted RBP2.48□□□□□ -2.01
CCNL1-204ENST00000464316 RPL37AP61513 92 aaKnown RBP2.48□□□□□ -2.01
CCNL1-204ENST00000464316 RELNP78509 3460 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
CCNL1-204ENST00000464316 MOBPQ13875 183 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 ASB16-AS1Q495Z4 193 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 ZNF292O60281 2723 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 C8orf87E5RJ46 101 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
CCNL1-204ENST00000464316 SONP18583 2426 aaKnown RBP2.47□□□□□ -2.01
CCNL1-204ENST00000464316 SETD2Q9BYW2 2564 aaPredicted RBP2.46□□□□□ -2.01
CCNL1-204ENST00000464316 DEFB131BA0A096LNP1 70 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 FAT3Q8TDW7 4589 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 CACNA1AO00555 2505 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 ACYP2P14621 99 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 DNAH17Q9UFH2 4485 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 AKAP13Q12802 2813 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 A8MU10 97 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
CCNL1-204ENST00000464316 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 DCHS1Q96JQ0 3298 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 LAMA5O15230 3695 aa2.46□□□□□ -2.02
CCNL1-204ENST00000464316 PKD1L2Q7Z442 2459 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 ANKRD17O75179 2603 aaKnown RBP2.45□□□□□ -2.02
CCNL1-204ENST00000464316 HRNRQ86YZ3 2850 aaPredicted RBP2.45□□□□□ -2.02
CCNL1-204ENST00000464316 A0A087X002 238 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 DNAH10OSP0CZ25 163 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 FAM168BA1KXE4 195 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 PRLHP81277 87 aa2.45□□□□□ -2.02
CCNL1-204ENST00000464316 C14orf177Q52M58 125 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms