RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
SNX17-205ENST00000464279 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
SNX17-205ENST00000464279 TRBV10-2A0A0K0K1G8 114 aa7.33□□□□□ -1.24
SNX17-205ENST00000464279 PYY3Q5JQD4 70 aa7.32□□□□□ -1.24
SNX17-205ENST00000464279 VAMP8Q9BV40 100 aa7.32□□□□□ -1.24
SNX17-205ENST00000464279 TMEM126AQ9H061 195 aa7.32□□□□□ -1.24
SNX17-205ENST00000464279 PAM16Q9Y3D7 125 aa7.32□□□□□ -1.24
SNX17-205ENST00000464279 COX8AP10176 69 aa7.31□□□□□ -1.24
SNX17-205ENST00000464279 Q6ZVH6 145 aa7.31□□□□□ -1.24
SNX17-205ENST00000464279 RETNLBQ9BQ08 111 aa7.31□□□□□ -1.24
SNX17-205ENST00000464279 TRBV10-3A0A0K0K1G6 114 aa7.3□□□□□ -1.24
SNX17-205ENST00000464279 ZNF861PO60384 105 aa7.3□□□□□ -1.24
SNX17-205ENST00000464279 IFITM1P13164 125 aa7.3□□□□□ -1.24
SNX17-205ENST00000464279 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
SNX17-205ENST00000464279 PPDPFQ9H3Y8 114 aa7.3□□□□□ -1.24
SNX17-205ENST00000464279 PRYO14603 147 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 DDTP30046 118 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
SNX17-205ENST00000464279 UBE2AP49459 152 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 KRTAP13-1Q8IUC0 172 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
SNX17-205ENST00000464279 DLEU1O43261 78 aa7.28□□□□□ -1.24
SNX17-205ENST00000464279 IGLV6-57P01721 117 aa7.28□□□□□ -1.24
SNX17-205ENST00000464279 S100A7L2Q5SY68 101 aa7.28□□□□□ -1.24
SNX17-205ENST00000464279 FAM19A1Q7Z5A9 133 aa7.28□□□□□ -1.24
SNX17-205ENST00000464279 MUSTN1Q8IVN3 82 aa7.28□□□□□ -1.24
SNX17-205ENST00000464279 IGLV7-46A0A075B6I9 117 aa7.27□□□□□ -1.25
SNX17-205ENST00000464279 SPRR1AP35321 89 aa7.27□□□□□ -1.25
SNX17-205ENST00000464279 PRLHP81277 87 aa7.27□□□□□ -1.25
SNX17-205ENST00000464279 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
SNX17-205ENST00000464279 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
SNX17-205ENST00000464279 S100A12P80511 92 aa7.26□□□□□ -1.25
SNX17-205ENST00000464279 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
SNX17-205ENST00000464279 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
SNX17-205ENST00000464279 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
SNX17-205ENST00000464279 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
SNX17-205ENST00000464279 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
SNX17-205ENST00000464279 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
SNX17-205ENST00000464279 LCE2CQ5TA81 110 aa7.24□□□□□ -1.25
SNX17-205ENST00000464279 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
SNX17-205ENST00000464279 OR13C6PQ8NH95 151 aa7.24□□□□□ -1.25
SNX17-205ENST00000464279 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
SNX17-205ENST00000464279 MT1HP80294 61 aa7.23□□□□□ -1.25
SNX17-205ENST00000464279 CBY1Q9Y3M2 126 aa7.23□□□□□ -1.25
SNX17-205ENST00000464279 C2orf91Q6ZV80 131 aa7.22□□□□□ -1.25
SNX17-205ENST00000464279 HIST1H4GQ99525 98 aa7.22□□□□□ -1.25
SNX17-205ENST00000464279 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
SNX17-205ENST00000464279 B5MCH6 92 aa7.21□□□□□ -1.26
SNX17-205ENST00000464279 ZNF73O43830 326 aaPredicted RBP7.21□□□□□ -1.26
SNX17-205ENST00000464279 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
SNX17-205ENST00000464279 HIGD2AQ9BW72 106 aa7.21□□□□□ -1.26
SNX17-205ENST00000464279 A4D1N5 150 aa7.2□□□□□ -1.26
SNX17-205ENST00000464279 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
SNX17-205ENST00000464279 A6NDN8 102 aa7.19□□□□□ -1.26
SNX17-205ENST00000464279 Q6ZRX8 168 aa7.19□□□□□ -1.26
SNX17-205ENST00000464279 TYMSOSQ8TAI1 123 aa7.19□□□□□ -1.26
SNX17-205ENST00000464279 SMCR5Q8TEV8 140 aa7.18□□□□□ -1.26
SNX17-205ENST00000464279 A0A087X002 238 aa7.17□□□□□ -1.26
SNX17-205ENST00000464279 HINT1P49773 126 aaPredicted RBP7.17□□□□□ -1.26
SNX17-205ENST00000464279 C6orf99Q4VX62 202 aa7.17□□□□□ -1.26
SNX17-205ENST00000464279 Q9BRP9 147 aa7.17□□□□□ -1.26
SNX17-205ENST00000464279 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
SNX17-205ENST00000464279 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
SNX17-205ENST00000464279 TAL2Q16559 108 aa7.16□□□□□ -1.26
SNX17-205ENST00000464279 C12orf57Q99622 126 aa7.16□□□□□ -1.26
SNX17-205ENST00000464279 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.26
SNX17-205ENST00000464279 SMIM11BQ8TCY0 68 aa7.15□□□□□ -1.26
SNX17-205ENST00000464279 SPRR4Q96PI1 79 aa7.15□□□□□ -1.26
SNX17-205ENST00000464279 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.26
SNX17-205ENST00000464279 ERC2-IT1O76042 136 aa7.14□□□□□ -1.27
SNX17-205ENST00000464279 ELOF1P60002 83 aaKnown RBP7.14□□□□□ -1.27
SNX17-205ENST00000464279 CEND1Q8N111 149 aa7.14□□□□□ -1.27
SNX17-205ENST00000464279 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
SNX17-205ENST00000464279 ZNF706Q9Y5V0 76 aaPredicted RBP7.14□□□□□ -1.27
SNX17-205ENST00000464279 COX7BP24311 80 aa7.13□□□□□ -1.27
SNX17-205ENST00000464279 FAM229BQ4G0N7 80 aa7.13□□□□□ -1.27
SNX17-205ENST00000464279 TRBV7-6A0A0J9YX20 115 aa7.12□□□□□ -1.27
SNX17-205ENST00000464279 CFC1P0CG37 223 aa7.12□□□□□ -1.27
SNX17-205ENST00000464279 HSD52Q0P140 79 aa7.12□□□□□ -1.27
SNX17-205ENST00000464279 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
SNX17-205ENST00000464279 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
SNX17-205ENST00000464279 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
SNX17-205ENST00000464279 FXYD2P54710 66 aa7.11□□□□□ -1.27
SNX17-205ENST00000464279 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
SNX17-205ENST00000464279 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
SNX17-205ENST00000464279 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
SNX17-205ENST00000464279 A6NJY4 79 aa7.1□□□□□ -1.27
SNX17-205ENST00000464279 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
SNX17-205ENST00000464279 RAB37Q96AX2 223 aa7.1□□□□□ -1.27
SNX17-205ENST00000464279 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
SNX17-205ENST00000464279 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
SNX17-205ENST00000464279 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
SNX17-205ENST00000464279 GAGE2AQ6NT46 116 aa7.08□□□□□ -1.28
SNX17-205ENST00000464279 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
SNX17-205ENST00000464279 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
SNX17-205ENST00000464279 H7C2G1 150 aa7.07□□□□□ -1.28
SNX17-205ENST00000464279 KRTAP13-3Q3SY46 172 aa7.07□□□□□ -1.28
SNX17-205ENST00000464279 C3orf22Q8N5N4 141 aa7.07□□□□□ -1.28
SNX17-205ENST00000464279 USH2AO75445 5202 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms