RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 AKAP6Q13023 2319 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 RHPN1-AS1Q9BWJ2 59 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 KLK12Q9UKR0 248 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 DNAH7Q8WXX0 4024 aa2.44□□□□□ -2.02
COL8A1-205ENST00000463753 BSNQ9UPA5 3926 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 K7EQD1 137 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 FSHBP01225 129 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 ATP1A1-AS1Q5TC04 95 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 Q8N1X5 172 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 FAT3Q8TDW7 4589 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.43□□□□□ -2.02
COL8A1-205ENST00000463753 NDUFA4O00483 81 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 IGHV3-53P01767 116 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00575Q6W349 94 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 FAM215AQ9Y5M1 114 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 PDE6GP18545 87 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 MP68P56378 58 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00208Q96KT6 92 aa2.43□□□□□ -2.02
COL8A1-205ENST00000463753 SPTBN2O15020 2390 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 TRGV2A0A075B6R0 118 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 B4DSR2 109 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 MINOS1Q5TGZ0 78 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 Q75L30 129 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 DEFB116Q30KQ4 102 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 LINC00476Q8WZB0 136 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
COL8A1-205ENST00000463753 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
COL8A1-205ENST00000463753 PIEZO2Q9H5I5 2752 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 C9orf66Q5T8R8 295 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 CCL19Q99731 98 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 ITPR2Q14571 2701 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.02
COL8A1-205ENST00000463753 ETDCA0A1B0GVM5 59 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 ODF3BA8MYP8 253 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 BSPH1Q075Z2 132 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 SPAG11AQ6PDA7 123 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 CASC2Q6XLA1 102 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 RETNLBQ9BQ08 111 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 KAAG1Q9UBP8 84 aa2.41□□□□□ -2.02
COL8A1-205ENST00000463753 LOC101927531A0A1B0GV80 90 aa2.4□□□□□ -2.02
COL8A1-205ENST00000463753 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.02
COL8A1-205ENST00000463753 WFDC10AQ9H1F0 79 aa2.4□□□□□ -2.02
COL8A1-205ENST00000463753 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.02
COL8A1-205ENST00000463753 COX7BP24311 80 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 SPINK7P58062 85 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 SPTAN1Q13813 2472 aaKnown RBP2.4□□□□□ -2.03
COL8A1-205ENST00000463753 NDUFB1O75438 58 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 INSP01308 110 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 IGHV4-31P0DP07 118 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 LMO4P61968 165 aa2.4□□□□□ -2.03
COL8A1-205ENST00000463753 ZCCHC13Q8WW36 166 aaKnown RBP2.4□□□□□ -2.03
COL8A1-205ENST00000463753 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 REG3AQ06141 175 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 C18orf65Q6ZTR6 163 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 Q8NAQ8 132 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 Q8NDZ9 215 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 ANKHD1Q8IWZ3 2542 aaKnown RBP2.39□□□□□ -2.03
COL8A1-205ENST00000463753 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 SPAG11BQ08648 103 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 DEFB105AQ8NG35 78 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 SMR3AQ99954 134 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 CSMD2Q7Z408 3487 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 LRBAP50851 2863 aa2.39□□□□□ -2.03
COL8A1-205ENST00000463753 TRGV4A0A0C4DH28 118 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 CDK2AP2O75956 126 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 FAT2Q9NYQ8 4349 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 COA5Q86WW8 74 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 WFDC10BQ8IUB3 73 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 WFDC13Q8IUB5 93 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 LRRK2Q5S007 2527 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 CRYBG3Q68DQ2 2970 aa2.38□□□□□ -2.03
COL8A1-205ENST00000463753 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 LOC100131303A0A0U1RQF7 123 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 K7EQZ3 153 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 TLN1Q9Y490 2541 aaKnown RBP2.37□□□□□ -2.03
COL8A1-205ENST00000463753 DCHS2Q6V1P9 2916 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 POLQO75417 2590 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 CASC10Q5T4H9 136 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 WNK1Q9H4A3 2382 aa2.37□□□□□ -2.03
COL8A1-205ENST00000463753 CELSR2Q9HCU4 2923 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 NBASA2RRP1 2371 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 IGHV4-30-2A0A087WSY4 118 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 DEFB131AP59861 70 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 ELOF1P60002 83 aaKnown RBP2.36□□□□□ -2.03
COL8A1-205ENST00000463753 LY6EQ16553 131 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 C11orf71Q6IPW1 123 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 Q6YL49 198 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 NOTCH3Q9UM47 2321 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 IGLV10-54A0A075B6I4 117 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 H0Y9J4 135 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
COL8A1-205ENST00000463753 IGHV4-38-2P0DP08 117 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms