RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SMIM13P0DJ93 91 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 NPC2P61916 151 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 SYCNQ0VAF6 134 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 C9orf129Q5T035 196 aaKnown RBP2.24□□□□□ -2.05
SCFD1-204ENST00000463622 CARD19Q96LW7 228 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 CAMK2N2Q96S95 79 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 VAMP8Q9BV40 100 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 A8MU10 97 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 APOMO95445 188 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 COX8AP10176 69 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 LGALS3P17931 250 aaKnown RBP2.23□□□□□ -2.05
SCFD1-204ENST00000463622 PFN2P35080 140 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 CNBPP62633 177 aaKnown RBP2.23□□□□□ -2.05
SCFD1-204ENST00000463622 C6orf226Q5I0X4 101 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 KRTAP11-1Q8IUC1 163 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 BOD1L2Q8IYS8 172 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 C2orf48Q96LS8 159 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 XAGE1AQ9HD64 81 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 IGKV2-24A0A0C4DH68 120 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 MYMXA0A1B0GTQ4 84 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 A0A1W2PNN7 141 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
SCFD1-204ENST00000463622 HERVK_113P61574 105 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 MIR7-3HGQ8N6C7 128 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 C9orf163Q8N9P6 203 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 FAM218AQ96MZ4 157 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 ERG28Q9UKR5 140 aa2.23□□□□□ -2.05
SCFD1-204ENST00000463622 CKS1BP61024 79 aa2.22□□□□□ -2.05
SCFD1-204ENST00000463622 PRR3P79522 188 aaKnown RBP2.22□□□□□ -2.05
SCFD1-204ENST00000463622 RPL18AQ02543 176 aaKnown RBP2.22□□□□□ -2.05
SCFD1-204ENST00000463622 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
SCFD1-204ENST00000463622 MEIG1Q5JSS6 88 aa2.22□□□□□ -2.05
SCFD1-204ENST00000463622 SND1-IT1Q9HBX3 110 aa2.22□□□□□ -2.05
SCFD1-204ENST00000463622 TRBV30A0A0K0K1B3 111 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 HSBP1L1C9JCN9 74 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 CXCL5P42830 114 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 KRTAP10-8P60410 259 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 LINC01600Q96MT4 127 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 MUC2Q02817 5179 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 NDUFC2-KCTD14E9PQ53 114 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 DLEU1O43261 78 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 TLX1NBP0CAT3 122 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 FXYD2P54710 66 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 LINC00158P58513 81 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 CIRBPQ14011 172 aaKnown RBP2.21□□□□□ -2.06
SCFD1-204ENST00000463622 SLC25A34Q6PIV7 304 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 MUSTN1Q8IVN3 82 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 LINC00308Q8TCZ7 52 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 SPACA4Q8TDM5 124 aa2.21□□□□□ -2.06
SCFD1-204ENST00000463622 IGKV2-28A0A075B6P5 120 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 LOC107984640A0A0U1RRK4 108 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 NCR3O14931 201 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 IGKV2D-28P01615 120 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 HERV-K104P63124 156 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 SCGB1D4Q6XE38 83 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 PHF5AQ7RTV0 110 aaKnown RBP2.2□□□□□ -2.06
SCFD1-204ENST00000463622 FAM19A5Q7Z5A7 132 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-204ENST00000463622 MIEN1Q9BRT3 115 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 SPANXDQ9BXN6 97 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 SPANXCQ9NY87 97 aa2.2□□□□□ -2.06
SCFD1-204ENST00000463622 K7ERJ3 54 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 TIMM17BO60830 172 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 CTAG1AP78358 180 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 S100A12P80511 92 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 SPANXB1Q9NS25 103 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-204ENST00000463622 UQCR10Q9UDW1 63 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-204ENST00000463622 LOC107984156A0A0G2JMH3 177 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 A4D1N5 150 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 PCP4L1A6NKN8 68 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 LINC00587B1AMM8 73 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 F8WDY8 70 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 Q6ZVH6 145 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 ARL17AQ8IVW1 177 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 LINC00337Q8N6G1 96 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 C7orf33Q8WU49 177 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 HIGD1BQ9P298 99 aa2.19□□□□□ -2.06
SCFD1-204ENST00000463622 LPAP08519 4548 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 RPL37AP8A6NKH3 93 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 DDTP30046 118 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-204ENST00000463622 COX17Q14061 63 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 CEND1Q8N111 149 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 PLAC8Q9NZF1 115 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 C22orf24Q9Y442 160 aa2.18□□□□□ -2.06
SCFD1-204ENST00000463622 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 TMEM238C9JI98 176 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 M0QXV9 152 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 HSD52Q0P140 79 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 LINC00167Q96N53 147 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 HIST1H4GQ99525 98 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 SNHG12Q9BXW3 62 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 TSTD3H0UI37 97 aa2.17□□□□□ -2.06
SCFD1-204ENST00000463622 SRSF9Q13242 221 aaKnown RBP eCLIP2.17□□□□□ -2.06
SCFD1-204ENST00000463622 SFTA2Q6UW10 78 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms