RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 A0A087X002 238 aa13.68□□□□□ -0.22
SSNA1-203ENST00000463511 TRBV10-3A0A0K0K1G6 114 aa13.68□□□□□ -0.22
SSNA1-203ENST00000463511 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
SSNA1-203ENST00000463511 TMEM126AQ9H061 195 aa13.67□□□□□ -0.22
SSNA1-203ENST00000463511 SLC25A34Q6PIV7 304 aa13.66□□□□□ -0.22
SSNA1-203ENST00000463511 DDTP30046 118 aa13.65□□□□□ -0.22
SSNA1-203ENST00000463511 KCNQ1DNQ9H478 68 aa13.65□□□□□ -0.22
SSNA1-203ENST00000463511 PRYO14603 147 aa13.64□□□□□ -0.23
SSNA1-203ENST00000463511 IGLV6-57P01721 117 aa13.64□□□□□ -0.23
SSNA1-203ENST00000463511 RPL28P46779 137 aaKnown RBP13.64□□□□□ -0.23
SSNA1-203ENST00000463511 KRTAP9-2Q9BYQ4 174 aa13.64□□□□□ -0.23
SSNA1-203ENST00000463511 S100A7L2Q5SY68 101 aa13.63□□□□□ -0.23
SSNA1-203ENST00000463511 LOC105371267A0A1B0GV96 52 aa13.62□□□□□ -0.23
SSNA1-203ENST00000463511 C2orf91Q6ZV80 131 aa13.62□□□□□ -0.23
SSNA1-203ENST00000463511 LINC00518Q8N0U6 118 aa13.62□□□□□ -0.23
SSNA1-203ENST00000463511 TYMSOSQ8TAI1 123 aa13.62□□□□□ -0.23
SSNA1-203ENST00000463511 HIGD1BQ9P298 99 aa13.62□□□□□ -0.23
SSNA1-203ENST00000463511 CRYGAP11844 174 aa13.61□□□□□ -0.23
SSNA1-203ENST00000463511 SPRR1AP35321 89 aa13.61□□□□□ -0.23
SSNA1-203ENST00000463511 KRTAP13-1Q8IUC0 172 aa13.61□□□□□ -0.23
SSNA1-203ENST00000463511 S100A12P80511 92 aa13.59□□□□□ -0.23
SSNA1-203ENST00000463511 FAM19A1Q7Z5A9 133 aa13.59□□□□□ -0.23
SSNA1-203ENST00000463511 LINC00337Q8N6G1 96 aa13.59□□□□□ -0.23
SSNA1-203ENST00000463511 HIST1H4GQ99525 98 aa13.59□□□□□ -0.23
SSNA1-203ENST00000463511 KRTAP4-16G5E9R7 235 aaPredicted RBP13.58□□□□□ -0.24
SSNA1-203ENST00000463511 UBE2AP49459 152 aa13.58□□□□□ -0.24
SSNA1-203ENST00000463511 OR13C6PQ8NH95 151 aa13.58□□□□□ -0.24
SSNA1-203ENST00000463511 ANAPC11Q9NYG5 84 aa13.58□□□□□ -0.24
SSNA1-203ENST00000463511 PRLHP81277 87 aa13.57□□□□□ -0.24
SSNA1-203ENST00000463511 A4D1N5 150 aa13.55□□□□□ -0.24
SSNA1-203ENST00000463511 TRAV23DV6A0A075B6W5 121 aa13.54□□□□□ -0.24
SSNA1-203ENST00000463511 RETNLBQ9BQ08 111 aa13.54□□□□□ -0.24
SSNA1-203ENST00000463511 SMIM6P0DI80 62 aa13.53□□□□□ -0.24
SSNA1-203ENST00000463511 KRTAP13-2Q52LG2 175 aa13.53□□□□□ -0.24
SSNA1-203ENST00000463511 LCE2AQ5TA79 106 aaPredicted RBP13.53□□□□□ -0.24
SSNA1-203ENST00000463511 FAT4Q6V0I7 4981 aa13.51□□□□□ -0.25
SSNA1-203ENST00000463511 ETDCA0A1B0GVM5 59 aa13.51□□□□□ -0.25
SSNA1-203ENST00000463511 CBY1Q9Y3M2 126 aa13.51□□□□□ -0.25
SSNA1-203ENST00000463511 B5MCH6 92 aa13.5□□□□□ -0.25
SSNA1-203ENST00000463511 TAL2Q16559 108 aa13.5□□□□□ -0.25
SSNA1-203ENST00000463511 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
SSNA1-203ENST00000463511 A6NDN8 102 aa13.49□□□□□ -0.25
SSNA1-203ENST00000463511 ZNF73O43830 326 aaPredicted RBP13.49□□□□□ -0.25
SSNA1-203ENST00000463511 TRAV13-2A0A0B4J235 113 aa13.48□□□□□ -0.25
SSNA1-203ENST00000463511 LINC00304Q8N9R0 145 aa13.47□□□□□ -0.25
SSNA1-203ENST00000463511 CEND1Q8N111 149 aa13.46□□□□□ -0.25
SSNA1-203ENST00000463511 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
SSNA1-203ENST00000463511 C12orf57Q99622 126 aa13.45□□□□□ -0.26
SSNA1-203ENST00000463511 HIGD2AQ9BW72 106 aa13.45□□□□□ -0.26
SSNA1-203ENST00000463511 PRO1933Q9H354 126 aa13.45□□□□□ -0.26
SSNA1-203ENST00000463511 Q6ZRX8 168 aa13.44□□□□□ -0.26
SSNA1-203ENST00000463511 MUC17Q685J3 4493 aa13.44□□□□□ -0.26
SSNA1-203ENST00000463511 SMCR5Q8TEV8 140 aa13.43□□□□□ -0.26
SSNA1-203ENST00000463511 CDIP1Q9H305 208 aa13.43□□□□□ -0.26
SSNA1-203ENST00000463511 C6orf99Q4VX62 202 aa13.42□□□□□ -0.26
SSNA1-203ENST00000463511 Q9BRP9 147 aa13.42□□□□□ -0.26
SSNA1-203ENST00000463511 CFC1BP0CG36 223 aa13.41□□□□□ -0.26
SSNA1-203ENST00000463511 CFC1P0CG37 223 aa13.41□□□□□ -0.26
SSNA1-203ENST00000463511 HSD52Q0P140 79 aa13.41□□□□□ -0.26
SSNA1-203ENST00000463511 TPRXLQ17RH7 258 aa13.41□□□□□ -0.26
SSNA1-203ENST00000463511 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
SSNA1-203ENST00000463511 HINT1P49773 126 aaPredicted RBP13.4□□□□□ -0.26
SSNA1-203ENST00000463511 FXYD2P54710 66 aa13.39□□□□□ -0.27
SSNA1-203ENST00000463511 IGLV7-46A0A075B6I9 117 aa13.38□□□□□ -0.27
SSNA1-203ENST00000463511 ERC2-IT1O76042 136 aa13.38□□□□□ -0.27
SSNA1-203ENST00000463511 COX7BP24311 80 aa13.37□□□□□ -0.27
SSNA1-203ENST00000463511 TRBV7-6A0A0J9YX20 115 aa13.36□□□□□ -0.27
SSNA1-203ENST00000463511 ELOF1P60002 83 aaKnown RBP13.36□□□□□ -0.27
SSNA1-203ENST00000463511 A0A0B4J2C4 111 aa13.35□□□□□ -0.27
SSNA1-203ENST00000463511 RAB37Q96AX2 223 aa13.34□□□□□ -0.27
SSNA1-203ENST00000463511 SPRR4Q96PI1 79 aa13.34□□□□□ -0.27
SSNA1-203ENST00000463511 TMEM238LA0A1B0GVL6 79 aa13.33□□□□□ -0.28
SSNA1-203ENST00000463511 A6NJY4 79 aa13.33□□□□□ -0.28
SSNA1-203ENST00000463511 KRTAP9-6A0A140TA67 174 aa13.32□□□□□ -0.28
SSNA1-203ENST00000463511 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
SSNA1-203ENST00000463511 C3orf22Q8N5N4 141 aa13.31□□□□□ -0.28
SSNA1-203ENST00000463511 DHRS4-AS1Q9P1J3 65 aa13.3□□□□□ -0.28
SSNA1-203ENST00000463511 ZNF706Q9Y5V0 76 aaPredicted RBP13.3□□□□□ -0.28
SSNA1-203ENST00000463511 H7C2G1 150 aa13.29□□□□□ -0.28
SSNA1-203ENST00000463511 CTAG1AP78358 180 aa13.28□□□□□ -0.28
SSNA1-203ENST00000463511 PRO1854Q9UHT4 67 aa13.28□□□□□ -0.28
SSNA1-203ENST00000463511 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
SSNA1-203ENST00000463511 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.29
SSNA1-203ENST00000463511 TSTD3H0UI37 97 aa13.26□□□□□ -0.29
SSNA1-203ENST00000463511 VAMP3Q15836 100 aa13.26□□□□□ -0.29
SSNA1-203ENST00000463511 ST20-AS1Q8NBB2 130 aa13.26□□□□□ -0.29
SSNA1-203ENST00000463511 LINC00483Q53H64 154 aa13.24□□□□□ -0.29
SSNA1-203ENST00000463511 GAGE2AQ6NT46 116 aa13.24□□□□□ -0.29
SSNA1-203ENST00000463511 K7ERJ3 54 aa13.22□□□□□ -0.29
SSNA1-203ENST00000463511 LINC00575Q6W349 94 aa13.21□□□□□ -0.29
SSNA1-203ENST00000463511 SPAG11AQ6PDA7 123 aa13.19□□□□□ -0.3
SSNA1-203ENST00000463511 Q1RN00 199 aa13.18□□□□□ -0.3
SSNA1-203ENST00000463511 M0R143 59 aa13.16□□□□□ -0.3
SSNA1-203ENST00000463511 SPRR1BP22528 89 aa13.16□□□□□ -0.3
SSNA1-203ENST00000463511 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
SSNA1-203ENST00000463511 SLC25A20O43772 301 aa13.15□□□□□ -0.3
SSNA1-203ENST00000463511 hADV29S1A0JD25 119 aa13.14□□□□□ -0.31
SSNA1-203ENST00000463511 H0YGX0 51 aa13.13□□□□□ -0.31
SSNA1-203ENST00000463511 LINC01547P58512 204 aaPredicted RBP13.13□□□□□ -0.31
SSNA1-203ENST00000463511 C4orf48Q5BLP8 95 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms