RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PAIP2BQ9ULR5 123 aaKnown RBP1.17□□□□□ -2.22
VRK2-208ENST00000463222 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
VRK2-208ENST00000463222 DOCK11Q5JSL3 2073 aa1.17□□□□□ -2.22
VRK2-208ENST00000463222 HERC1Q15751 4861 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 TRAV1-2A0A0B4J238 106 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 RPL39P5Q59GN2 51 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 C6orf201Q7Z4U5 140 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 C8orf59Q8N0T1 100 aaPredicted RBP1.16□□□□□ -2.22
VRK2-208ENST00000463222 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.16□□□□□ -2.22
VRK2-208ENST00000463222 VSTM2AQ8TAG5 236 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 ARL11Q969Q4 196 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 ARHGAP5-AS1Q96IT6 56 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 PSMG3Q9BT73 122 aaPredicted RBP1.16□□□□□ -2.22
VRK2-208ENST00000463222 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
VRK2-208ENST00000463222 LRP1BQ9NZR2 4599 aa1.16□□□□□ -2.22
VRK2-208ENST00000463222 PKD1P98161 4303 aa1.15□□□□□ -2.22
VRK2-208ENST00000463222 MCRIP1C9JLW8 97 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 H3BUA1 57 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 LY6G6CO95867 125 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
VRK2-208ENST00000463222 LINC01545Q5VT33 79 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 TMEM203Q969S6 136 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 TNCP24821 2201 aa1.15□□□□□ -2.23
VRK2-208ENST00000463222 MYCBP2O75592 4640 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 DNAH5Q8TE73 4624 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 LCE6AA0A183 80 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 IGLC7A0M8Q6 106 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 DEFA5Q01523 94 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 TMEM167AQ8TBQ9 72 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 FAM103A1Q9BTL3 118 aaKnown RBP1.14□□□□□ -2.23
VRK2-208ENST00000463222 NDUFA12Q9UI09 145 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 FAT1Q14517 4588 aa1.14□□□□□ -2.23
VRK2-208ENST00000463222 FAM223BA6NKX1 122 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 K7EIM0 57 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 PRH1P02810 166 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 TPPP2P59282 170 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 DEFB114Q30KQ6 69 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 ZNF818PQ6ZRF7 136 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 FAM223AQ8IWN6 122 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 TTC9CQ8N5M4 171 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 DPH3Q96FX2 82 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 USMG5Q96IX5 58 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 FXYD6Q9H0Q3 95 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 NDUFA4L2Q9NRX3 87 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 TMEM14BQ9NUH8 114 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 SCN3BQ9NY72 215 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 BET1LQ9NYM9 111 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 ABRACLQ9P1F3 81 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
VRK2-208ENST00000463222 CCDC179H3BU77 68 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 I3L2K1 104 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 APELAP0DMC3 54 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 PYYP10082 97 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 CBLN1P23435 193 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 S100A13Q99584 98 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 TMEM191AQ9H0A3 160 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 UBR4Q5T4S7 5183 aa1.12□□□□□ -2.23
VRK2-208ENST00000463222 TRBV7-1A0A0A6YYK4 115 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 TEX49A0A1B0GTD5 131 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 A8MTW9 85 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 PDCD5O14737 125 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 GNG2P59768 71 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 NPC2P61916 151 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 NMSQ5H8A3 153 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 DEFB121Q5J5C9 76 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 SPANXN1Q5VSR9 72 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 TSKUQ8WUA8 353 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 SMIM4Q8WVI0 70 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 LSM10Q969L4 123 aaKnown RBP1.11□□□□□ -2.23
VRK2-208ENST00000463222 COA4Q9NYJ1 87 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 V9GYH0 126 aa1.11□□□□□ -2.23
VRK2-208ENST00000463222 A0A087WXM4 84 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 CRYM-AS1A6NIL9 109 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 NDUFA4O00483 81 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 IL5P05113 134 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 IGLC1P0CG04 106 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 SSBP1Q04837 148 aaKnown RBP1.1□□□□□ -2.23
VRK2-208ENST00000463222 CATR1Q13166 79 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 PLGLAQ15195 96 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 CYP2G1PQ6ZSU1 146 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 KCNRGQ8N5I3 272 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 TMEM141Q96I45 108 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 Q9H521 79 aa1.1□□□□□ -2.23
VRK2-208ENST00000463222 VPS13BQ7Z7G8 4022 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 CORTO00230 105 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 TRAPPC2P0DI81 140 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 TRAPPC2BP0DI82 140 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 MRPS10P82664 201 aaKnown RBP1.09□□□□□ -2.23
VRK2-208ENST00000463222 KLKP1Q107X0 134 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 DEFB135Q30KP9 77 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 SPINK9Q5DT21 86 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 MEIG1Q5JSS6 88 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 S100A16Q96FQ6 103 aaKnown RBP1.09□□□□□ -2.23
VRK2-208ENST00000463222 RHPN1-AS1Q9BWJ2 59 aa1.09□□□□□ -2.23
VRK2-208ENST00000463222 NAA60Q9H7X0 242 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms