RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	FAM168B	A1KXE4	195 aa		7.63	□□□□□ -1.19
RBM39-223	ENST00000463004	BAHCC1	Q9P281	2608 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	CFAP54	Q96N23	3096 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	ZNF861P	O60384	105 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	KRTAP21-3	Q3LHN1	58 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	SSBP3-AS1	Q7Z2R9	100 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	MOBP	Q13875	183 aa		7.62	□□□□□ -1.19
RBM39-223	ENST00000463004	PLA2G1B	P04054	148 aa	Known RBP	7.61	□□□□□ -1.19
RBM39-223	ENST00000463004	TP53AIP1	Q9HCN2	124 aa		7.61	□□□□□ -1.19
RBM39-223	ENST00000463004	TEX15	Q9BXT5	2789 aa		7.6	□□□□□ -1.19
RBM39-223	ENST00000463004	ST20-AS1	Q8NBB2	130 aa		7.59	□□□□□ -1.19
RBM39-223	ENST00000463004	IGHV6-1	A0A0B4J1U7	121 aa		7.59	□□□□□ -1.19
RBM39-223	ENST00000463004	REV3L	O60673	3130 aa		7.59	□□□□□ -1.19
RBM39-223	ENST00000463004	XIRP2	A4UGR9	3374 aa		7.59	□□□□□ -1.19
RBM39-223	ENST00000463004	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.59	□□□□□ -1.2
RBM39-223	ENST00000463004		A0A087WVE0	104 aa		7.58	□□□□□ -1.2
RBM39-223	ENST00000463004	CASC10	Q5T4H9	136 aa		7.58	□□□□□ -1.2
RBM39-223	ENST00000463004		V9GYY9	64 aa		7.58	□□□□□ -1.2
RBM39-223	ENST00000463004		H3BPC8	53 aa		7.57	□□□□□ -1.2
RBM39-223	ENST00000463004	COL6A3	P12111	3177 aa		7.56	□□□□□ -1.2
RBM39-223	ENST00000463004		Q8N9L7	120 aa		7.56	□□□□□ -1.2
RBM39-223	ENST00000463004	SPAG11A	Q6PDA7	123 aa		7.56	□□□□□ -1.2
RBM39-223	ENST00000463004		Q8N377	158 aa		7.56	□□□□□ -1.2
RBM39-223	ENST00000463004	FAM30A	Q9NZY2	134 aa		7.56	□□□□□ -1.2
RBM39-223	ENST00000463004	UBR5	O95071	2799 aa	Predicted RBP	7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	SETX	Q7Z333	2677 aa	Known RBP	7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	COL6A5	A8TX70	2615 aa		7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	TEP1	Q99973	2627 aa	Known RBP	7.55	□□□□□ -1.2
RBM39-223	ENST00000463004		A0A1W2PNN7	141 aa		7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	C8orf87	E5RJ46	101 aa		7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	TYMSOS	Q8TAI1	123 aa		7.55	□□□□□ -1.2
RBM39-223	ENST00000463004	hDV103S1	A0JD37	113 aa		7.54	□□□□□ -1.2
RBM39-223	ENST00000463004	SEC61G	P60059	68 aa		7.54	□□□□□ -1.2
RBM39-223	ENST00000463004	DMXL2	Q8TDJ6	3036 aa		7.54	□□□□□ -1.2
RBM39-223	ENST00000463004	IGLV7-43	P04211	117 aa		7.53	□□□□□ -1.2
RBM39-223	ENST00000463004	KRTAP26-1	Q6PEX3	210 aa		7.53	□□□□□ -1.2
RBM39-223	ENST00000463004	LINC00208	Q96KT6	92 aa		7.52	□□□□□ -1.2
RBM39-223	ENST00000463004	CCDC179	H3BU77	68 aa		7.52	□□□□□ -1.21
RBM39-223	ENST00000463004	OBSCN-AS1	Q96MR7	158 aa		7.52	□□□□□ -1.21
RBM39-223	ENST00000463004	SPTSSB	Q8NFR3	76 aa		7.52	□□□□□ -1.21
RBM39-223	ENST00000463004	TMEM254	Q8TBM7	123 aa		7.52	□□□□□ -1.21
RBM39-223	ENST00000463004	IGLV5-48	A0A075B6I7	105 aa		7.51	□□□□□ -1.21
RBM39-223	ENST00000463004	SNURF	Q9Y675	71 aa		7.51	□□□□□ -1.21
RBM39-223	ENST00000463004		H0Y9P7	68 aa		7.5	□□□□□ -1.21
RBM39-223	ENST00000463004	STAB1	Q9NY15	2570 aa		7.5	□□□□□ -1.21
RBM39-223	ENST00000463004		A8MWP4	228 aa		7.5	□□□□□ -1.21
RBM39-223	ENST00000463004	IGFL1	Q6UW32	110 aa		7.5	□□□□□ -1.21
RBM39-223	ENST00000463004	SPRR4	Q96PI1	79 aa		7.5	□□□□□ -1.21
RBM39-223	ENST00000463004	FRYL	O94915	3013 aa		7.49	□□□□□ -1.21
RBM39-223	ENST00000463004	PSORS1C2	Q9UIG4	136 aa		7.49	□□□□□ -1.21
RBM39-223	ENST00000463004	SPRR1A	P35321	89 aa		7.49	□□□□□ -1.21
RBM39-223	ENST00000463004	GCN1	Q92616	2671 aa	Known RBP	7.49	□□□□□ -1.21
RBM39-223	ENST00000463004	SPACA4	Q8TDM5	124 aa		7.48	□□□□□ -1.21
RBM39-223	ENST00000463004	ERC2-IT1	O76042	136 aa		7.48	□□□□□ -1.21
RBM39-223	ENST00000463004	PLAC8	Q9NZF1	115 aa		7.47	□□□□□ -1.21
RBM39-223	ENST00000463004	APC	P25054	2843 aa		7.47	□□□□□ -1.21
RBM39-223	ENST00000463004	FRY	Q5TBA9	3013 aa		7.47	□□□□□ -1.21
RBM39-223	ENST00000463004	SERP1	Q9Y6X1	66 aa		7.47	□□□□□ -1.21
RBM39-223	ENST00000463004	ATM	Q13315	3056 aa		7.46	□□□□□ -1.21
RBM39-223	ENST00000463004	DEFB116	Q30KQ4	102 aa		7.46	□□□□□ -1.21
RBM39-223	ENST00000463004	PRR15L	Q9BU68	103 aa		7.46	□□□□□ -1.22
RBM39-223	ENST00000463004	UTP20	O75691	2785 aa	Known RBP	7.46	□□□□□ -1.22
RBM39-223	ENST00000463004	ITPR2	Q14571	2701 aa		7.46	□□□□□ -1.22
RBM39-223	ENST00000463004	TNP2	Q05952	138 aa		7.45	□□□□□ -1.22
RBM39-223	ENST00000463004	SMIM29	Q86T20	159 aa		7.45	□□□□□ -1.22
RBM39-223	ENST00000463004	SPTBN5	Q9NRC6	3674 aa	Known RBP	7.45	□□□□□ -1.22
RBM39-223	ENST00000463004	CD164	Q04900	197 aa		7.45	□□□□□ -1.22
RBM39-223	ENST00000463004	LINC00313	P59037	77 aa		7.44	□□□□□ -1.22
RBM39-223	ENST00000463004	EYS	Q5T1H1	3165 aa		7.44	□□□□□ -1.22
RBM39-223	ENST00000463004	SMIM26	A0A096LP01	95 aa		7.44	□□□□□ -1.22
RBM39-223	ENST00000463004	VCAN	P13611	3396 aa		7.43	□□□□□ -1.22
RBM39-223	ENST00000463004	DMXL1	Q9Y485	3027 aa		7.43	□□□□□ -1.22
RBM39-223	ENST00000463004	NSD1	Q96L73	2696 aa	Predicted RBP	7.43	□□□□□ -1.22
RBM39-223	ENST00000463004	FAM229B	Q4G0N7	80 aa		7.42	□□□□□ -1.22
RBM39-223	ENST00000463004	C1orf64	Q8NEQ6	169 aa		7.42	□□□□□ -1.22
RBM39-223	ENST00000463004	HIVEP1	P15822	2718 aa		7.42	□□□□□ -1.22
RBM39-223	ENST00000463004	PRR15	Q8IV56	129 aa		7.41	□□□□□ -1.22
RBM39-223	ENST00000463004	ITPR1	Q14643	2758 aa		7.41	□□□□□ -1.22
RBM39-223	ENST00000463004	SPRR1B	P22528	89 aa		7.41	□□□□□ -1.22
RBM39-223	ENST00000463004	LINC00304	Q8N9R0	145 aa		7.4	□□□□□ -1.22
RBM39-223	ENST00000463004	TRAV22	A0A0B4J277	110 aa		7.4	□□□□□ -1.22
RBM39-223	ENST00000463004	COL12A1	Q99715	3063 aa		7.39	□□□□□ -1.23
RBM39-223	ENST00000463004	ADGRG4	Q8IZF6	3080 aa		7.39	□□□□□ -1.23
RBM39-223	ENST00000463004	KRTAP1-5	Q9BYS1	174 aa		7.39	□□□□□ -1.23
RBM39-223	ENST00000463004		A0A1W2PNM2	257 aa		7.39	□□□□□ -1.23
RBM39-223	ENST00000463004	MRPL34	Q9BQ48	92 aa	Known RBP	7.39	□□□□□ -1.23
RBM39-223	ENST00000463004		Q6ZR54	194 aa		7.38	□□□□□ -1.23
RBM39-223	ENST00000463004	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.38	□□□□□ -1.23
RBM39-223	ENST00000463004	MAP1A	P78559	2803 aa	Predicted RBP	7.38	□□□□□ -1.23
RBM39-223	ENST00000463004	SPINK1	P00995	79 aa		7.38	□□□□□ -1.23
RBM39-223	ENST00000463004	LOC101927531	A0A1B0GV80	90 aa		7.37	□□□□□ -1.23
RBM39-223	ENST00000463004	LCE6A	A0A183	80 aa		7.37	□□□□□ -1.23
RBM39-223	ENST00000463004		A0A1B0GVX0	72 aa		7.37	□□□□□ -1.23
RBM39-223	ENST00000463004	NOTCH1	P46531	2555 aa		7.36	□□□□□ -1.23
RBM39-223	ENST00000463004	SVIP	Q8NHG7	77 aa		7.36	□□□□□ -1.23
RBM39-223	ENST00000463004	IGLV8-61	A0A075B6I0	122 aa		7.35	□□□□□ -1.23
RBM39-223	ENST00000463004		K7EQZ3	153 aa		7.35	□□□□□ -1.23
RBM39-223	ENST00000463004	C8orf17	Q9NRJ1	99 aa		7.35	□□□□□ -1.23
RBM39-223	ENST00000463004	BOD1L1	Q8NFC6	3051 aa		7.34	□□□□□ -1.23
RBM39-223	ENST00000463004	KALRN	O60229	2985 aa		7.33	□□□□□ -1.24

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