RNA–Protein interactions for RNA: ENST00000462597.1

PDLIM4-204, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 767 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-204ENST00000462597 IGLV6-57P01721 117 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 FAM19A1Q7Z5A9 133 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 LINC00518Q8N0U6 118 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 LINC00337Q8N6G1 96 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 OR13C6PQ8NH95 151 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 KCNQ1DNQ9H478 68 aa11.22□□□□□ -0.61
PDLIM4-204ENST00000462597 UBE2AP49459 152 aa11.21□□□□□ -0.61
PDLIM4-204ENST00000462597 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 A4D1N5 150 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 ZNF861PO60384 105 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 PRLHP81277 87 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 LRP2P98164 4655 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
PDLIM4-204ENST00000462597 SPRR1AP35321 89 aa11.17□□□□□ -0.62
PDLIM4-204ENST00000462597 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
PDLIM4-204ENST00000462597 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
PDLIM4-204ENST00000462597 A6NDN8 102 aa11.16□□□□□ -0.62
PDLIM4-204ENST00000462597 KRTAP13-1Q8IUC0 172 aa11.16□□□□□ -0.62
PDLIM4-204ENST00000462597 C12orf57Q99622 126 aa11.16□□□□□ -0.62
PDLIM4-204ENST00000462597 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
PDLIM4-204ENST00000462597 H0Y9J4 135 aa11.15□□□□□ -0.62
PDLIM4-204ENST00000462597 TRAV13-2A0A0B4J235 113 aa11.14□□□□□ -0.63
PDLIM4-204ENST00000462597 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
PDLIM4-204ENST00000462597 TAL2Q16559 108 aa11.14□□□□□ -0.63
PDLIM4-204ENST00000462597 CBY1Q9Y3M2 126 aa11.14□□□□□ -0.63
PDLIM4-204ENST00000462597 ZNF73O43830 326 aaPredicted RBP11.13□□□□□ -0.63
PDLIM4-204ENST00000462597 CEND1Q8N111 149 aa11.12□□□□□ -0.63
PDLIM4-204ENST00000462597 PRR26Q8N8Z3 221 aa11.11□□□□□ -0.63
PDLIM4-204ENST00000462597 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
PDLIM4-204ENST00000462597 B5MCH6 92 aa11.1□□□□□ -0.63
PDLIM4-204ENST00000462597 HSD52Q0P140 79 aa11.1□□□□□ -0.63
PDLIM4-204ENST00000462597 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
PDLIM4-204ENST00000462597 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
PDLIM4-204ENST00000462597 Q6ZRX8 168 aa11.08□□□□□ -0.64
PDLIM4-204ENST00000462597 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
PDLIM4-204ENST00000462597 A6NJY4 79 aa11.07□□□□□ -0.64
PDLIM4-204ENST00000462597 HINT1P49773 126 aaPredicted RBP11.07□□□□□ -0.64
PDLIM4-204ENST00000462597 FXYD2P54710 66 aa11.07□□□□□ -0.64
PDLIM4-204ENST00000462597 C6orf99Q4VX62 202 aa11.07□□□□□ -0.64
PDLIM4-204ENST00000462597 CFC1BP0CG36 223 aa11.06□□□□□ -0.64
PDLIM4-204ENST00000462597 CFC1P0CG37 223 aa11.06□□□□□ -0.64
PDLIM4-204ENST00000462597 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
PDLIM4-204ENST00000462597 KRTAP1-4P0C5Y4 121 aa11.05□□□□□ -0.64
PDLIM4-204ENST00000462597 SMCR5Q8TEV8 140 aa11.05□□□□□ -0.64
PDLIM4-204ENST00000462597 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
PDLIM4-204ENST00000462597 A0A0B4J2C4 111 aa11.04□□□□□ -0.64
PDLIM4-204ENST00000462597 Q9BRP9 147 aa11.04□□□□□ -0.64
PDLIM4-204ENST00000462597 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
PDLIM4-204ENST00000462597 COX7BP24311 80 aa11.03□□□□□ -0.64
PDLIM4-204ENST00000462597 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
PDLIM4-204ENST00000462597 H7C2G1 150 aa11.01□□□□□ -0.65
PDLIM4-204ENST00000462597 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
PDLIM4-204ENST00000462597 ERC2-IT1O76042 136 aa11□□□□□ -0.65
PDLIM4-204ENST00000462597 TRBV7-6A0A0J9YX20 115 aa10.99□□□□□ -0.65
PDLIM4-204ENST00000462597 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
PDLIM4-204ENST00000462597 LPAP08519 4548 aa10.99□□□□□ -0.65
PDLIM4-204ENST00000462597 CTAG1AP78358 180 aa10.98□□□□□ -0.65
PDLIM4-204ENST00000462597 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
PDLIM4-204ENST00000462597 BVES-AS1Q5T3Y7 98 aa10.97□□□□□ -0.65
PDLIM4-204ENST00000462597 SPRR4Q96PI1 79 aa10.97□□□□□ -0.65
PDLIM4-204ENST00000462597 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
PDLIM4-204ENST00000462597 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
PDLIM4-204ENST00000462597 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
PDLIM4-204ENST00000462597 K7ERJ3 54 aa10.96□□□□□ -0.65
PDLIM4-204ENST00000462597 Q1RN00 199 aa10.96□□□□□ -0.65
PDLIM4-204ENST00000462597 VAMP3Q15836 100 aa10.94□□□□□ -0.66
PDLIM4-204ENST00000462597 A0A087X002 238 aa10.93□□□□□ -0.66
PDLIM4-204ENST00000462597 M0R143 59 aa10.92□□□□□ -0.66
PDLIM4-204ENST00000462597 CRYGAP11844 174 aa10.92□□□□□ -0.66
PDLIM4-204ENST00000462597 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
PDLIM4-204ENST00000462597 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
PDLIM4-204ENST00000462597 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
PDLIM4-204ENST00000462597 SLC25A20O43772 301 aa10.88□□□□□ -0.67
PDLIM4-204ENST00000462597 KRTAP13-2Q52LG2 175 aa10.87□□□□□ -0.67
PDLIM4-204ENST00000462597 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
PDLIM4-204ENST00000462597 LINC00575Q6W349 94 aa10.87□□□□□ -0.67
PDLIM4-204ENST00000462597 TSPAN13O95857 204 aa10.86□□□□□ -0.67
PDLIM4-204ENST00000462597 TRIAP1O43715 76 aa10.85□□□□□ -0.67
PDLIM4-204ENST00000462597 C3orf22Q8N5N4 141 aa10.85□□□□□ -0.67
PDLIM4-204ENST00000462597 TYMSOSQ8TAI1 123 aa10.85□□□□□ -0.67
PDLIM4-204ENST00000462597 hADV29S1A0JD25 119 aa10.84□□□□□ -0.67
PDLIM4-204ENST00000462597 PSMB2P49721 201 aa10.84□□□□□ -0.67
PDLIM4-204ENST00000462597 PRR4Q16378 134 aa10.84□□□□□ -0.67
PDLIM4-204ENST00000462597 DEFB105AQ8NG35 78 aa10.84□□□□□ -0.67
PDLIM4-204ENST00000462597 H0YGX0 51 aa10.83□□□□□ -0.68
PDLIM4-204ENST00000462597 BATFQ16520 125 aa10.83□□□□□ -0.68
PDLIM4-204ENST00000462597 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
PDLIM4-204ENST00000462597 IGLV9-49A0A0B4J1Y8 123 aa10.8□□□□□ -0.68
PDLIM4-204ENST00000462597 SPRR1BP22528 89 aa10.8□□□□□ -0.68
PDLIM4-204ENST00000462597 Q6ZQY7 126 aa10.8□□□□□ -0.68
PDLIM4-204ENST00000462597 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
PDLIM4-204ENST00000462597 LINC01547P58512 204 aaPredicted RBP10.79□□□□□ -0.68
PDLIM4-204ENST00000462597 IGLV5-48A0A075B6I7 105 aa10.78□□□□□ -0.68
PDLIM4-204ENST00000462597 COX6CP09669 75 aa10.78□□□□□ -0.68
PDLIM4-204ENST00000462597 CLEC2BQ92478 149 aa10.78□□□□□ -0.68
PDLIM4-204ENST00000462597 MOBPQ13875 183 aa10.77□□□□□ -0.69
PDLIM4-204ENST00000462597 SNCGO76070 127 aa10.76□□□□□ -0.69
PDLIM4-204ENST00000462597 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
PDLIM4-204ENST00000462597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms