RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SMIM7Q9BQ49 75 aa1.25□□□□□ -2.21
CLK1-206ENST00000461326 BIN3Q9NQY0 253 aa1.25□□□□□ -2.21
CLK1-206ENST00000461326 PRO0255Q9UI72 69 aa1.25□□□□□ -2.21
CLK1-206ENST00000461326 DNAH2Q9P225 4427 aa1.25□□□□□ -2.21
CLK1-206ENST00000461326 DNAH17Q9UFH2 4485 aa1.25□□□□□ -2.21
CLK1-206ENST00000461326 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 NBDYA0A0U1RRE5 68 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 TRBV6-4A0A1B0GX49 114 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 C1orf196B1AJZ1 125 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 IGHV3-30P01768 117 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 IGHV3-33P01772 117 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 CXCL1P09341 107 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 IGHV3-30-5P0DP03 117 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 EVI2AP22794 236 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 RAB4BP61018 213 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 ADIRFQ15847 76 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 SMIM15Q7Z3B0 74 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 ATP6V0E2Q8NHE4 81 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 DEFB104AQ8WTQ1 72 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 AP1S3Q96PC3 154 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 DPH3P1Q9H4G8 78 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 LY96Q9Y6Y9 160 aa1.24□□□□□ -2.21
CLK1-206ENST00000461326 FAT2Q9NYQ8 4349 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 TRBV7-3A0A075B6L6 115 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 A0A1B0GUT8 65 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 HIGD1CA8MV81 97 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 TMEM262E9PQX1 116 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 F2Z2F3 143 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 NDUFC2O95298 119 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 IGLC6P0CF74 106 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 LINC00694P0DN24 101 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 FOXA3P55318 350 aaPredicted RBP1.23□□□□□ -2.21
CLK1-206ENST00000461326 UBE2D3P61077 147 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 UBE2D2P62837 147 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 LELP1Q5T871 98 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 CLPSL2Q6UWE3 100 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.23□□□□□ -2.21
CLK1-206ENST00000461326 NUP35Q8NFH5 326 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 TSKUQ8WUA8 353 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 RPL39LQ96EH5 51 aaKnown RBP1.23□□□□□ -2.21
CLK1-206ENST00000461326 C14orf132Q9NPU4 83 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 V9GYV3 84 aa1.23□□□□□ -2.21
CLK1-206ENST00000461326 VPS13BQ7Z7G8 4022 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 DNAH11Q96DT5 4516 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TRBV25-1A0A075B6N4 114 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.22□□□□□ -2.21
CLK1-206ENST00000461326 A0A087WWC5 75 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 A0A087WX48 190 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TRBV6-8A0A0A6YYG3 113 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TRAV12-1A0A0B4J245 112 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 IGHV1-24A0A0C4DH33 117 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TRBV10-1A0A0K0K1A3 114 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 SMIM27A0A1W2PRY6 76 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 M0QY20 66 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 NCR2O95944 276 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 HBBP68871 147 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 LINC01556Q5JQF7 62 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 CLLU1Q5K131 121 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 MRPL54Q6P161 138 aaKnown RBP1.22□□□□□ -2.21
CLK1-206ENST00000461326 CNFNQ9BYD5 112 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TMEM191AQ9H0A3 160 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 NIT2Q9NQR4 276 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 NAT8BQ9UHF3 227 aa1.22□□□□□ -2.21
CLK1-206ENST00000461326 A0A087WTM6 91 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 TMEM218A2RU14 115 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 D6R8Y8 96 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 I3L3M4 83 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 K7EP13 123 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 MT-ND4LP03901 98 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 S100A8P05109 93 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 ADCYAP1P18509 176 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 FCER1GP30273 86 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 CKS2P33552 79 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 PKIAP61925 76 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 Q0VG73 95 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 IQCJQ1A5X6 159 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 ENHOQ6UWT2 76 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 LINC00269Q8N2A0 174 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 TMEM70Q9BUB7 260 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 ST20Q9HBF5 79 aa1.21□□□□□ -2.22
CLK1-206ENST00000461326 EPPK1P58107 5090 aaKnown RBP1.21□□□□□ -2.22
CLK1-206ENST00000461326 LOC110117498A0A087WWA1 95 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 IGKV2D-26A0A0A0MRZ7 120 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 C7orf77A4D0Y5 90 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 PPP1R17O96001 155 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 APOC3P02656 99 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 S100PP25815 95 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
CLK1-206ENST00000461326 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
CLK1-206ENST00000461326 HAMPP81172 84 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 WFDC2Q14508 124 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 Q8N814 137 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 PRELID3AQ96N28 172 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 SEC11CQ9BY50 192 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 TMEM126AQ9H061 195 aa1.2□□□□□ -2.22
CLK1-206ENST00000461326 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 TRAV13-1A0A0B4J241 112 aa1.19□□□□□ -2.22
CLK1-206ENST00000461326 TRBV27A0A0K0K1C4 114 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 368.4 ms