RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 X6R8D5 127 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 IGKV2-28A0A075B6P5 120 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 A0A087WYN8 130 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 TRAV10A0A0B4J240 114 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 TGP01266 2768 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 IGKV2D-28P01615 120 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 EGFEM1PQ0D2K5 195 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
HDAC9-219ENST00000461159 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 Q5VV11 94 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 C16orf74Q96GX8 76 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 TRGV2A0A075B6R0 118 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 KIAA0087Q14695 138 aa5.8□□□□□ -1.48
HDAC9-219ENST00000461159 A8MU10 97 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 CYP4F30PQ9H0H9 118 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 LYSTQ99698 3801 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 H0Y9J4 135 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 LECT2O14960 151 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 CCL18P55774 89 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 CSMD3Q7Z407 3707 aa5.79□□□□□ -1.48
HDAC9-219ENST00000461159 IGHV4-28A0A0C4DH34 117 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 NREPQ16612 68 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 C9orf129Q5T035 196 aaKnown RBP5.78□□□□□ -1.48
HDAC9-219ENST00000461159 JMJD7-PLA2G4BH0Y9G9 81 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 TNP2Q05952 138 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 CELA1Q9UNI1 258 aa5.78□□□□□ -1.48
HDAC9-219ENST00000461159 IGKV3OR2-268A0A0C4DH90 116 aa5.77□□□□□ -1.49
HDAC9-219ENST00000461159 K7EIL1 84 aa5.77□□□□□ -1.49
HDAC9-219ENST00000461159 TRBV6-4A0A1B0GX49 114 aa5.76□□□□□ -1.49
HDAC9-219ENST00000461159 NCR3O14931 201 aa5.76□□□□□ -1.49
HDAC9-219ENST00000461159 HTN3P15516 51 aa5.76□□□□□ -1.49
HDAC9-219ENST00000461159 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
HDAC9-219ENST00000461159 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
HDAC9-219ENST00000461159 PSCAO43653 123 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 Q8NAQ8 132 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 A0A096LPF7 62 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 TRGV4A0A0C4DH28 118 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 LIMD2Q9BT23 127 aa5.75□□□□□ -1.49
HDAC9-219ENST00000461159 TRBV6-8A0A0A6YYG3 113 aa5.74□□□□□ -1.49
HDAC9-219ENST00000461159 SLPIP03973 132 aa5.74□□□□□ -1.49
HDAC9-219ENST00000461159 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
HDAC9-219ENST00000461159 IGLV4-60A0A075B6I1 120 aa5.73□□□□□ -1.49
HDAC9-219ENST00000461159 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-219ENST00000461159 Q8N3U1 123 aa5.73□□□□□ -1.49
HDAC9-219ENST00000461159 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
HDAC9-219ENST00000461159 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
HDAC9-219ENST00000461159 A0A0J9YWU9 116 aa5.72□□□□□ -1.49
HDAC9-219ENST00000461159 LRCOL1A6NCL2 159 aa5.72□□□□□ -1.49
HDAC9-219ENST00000461159 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
HDAC9-219ENST00000461159 LINC00959A0A1B0GUT2 108 aa5.71□□□□□ -1.49
HDAC9-219ENST00000461159 Q75L30 129 aa5.71□□□□□ -1.49
HDAC9-219ENST00000461159 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.49
HDAC9-219ENST00000461159 Q8IZM0 81 aa5.7□□□□□ -1.5
HDAC9-219ENST00000461159 Q8N814 137 aa5.7□□□□□ -1.5
HDAC9-219ENST00000461159 C3orf84H3BNL1 204 aa5.7□□□□□ -1.5
HDAC9-219ENST00000461159 BPY2O14599 106 aa5.7□□□□□ -1.5
HDAC9-219ENST00000461159 NANOS2P60321 138 aaKnown RBP5.7□□□□□ -1.5
HDAC9-219ENST00000461159 SPART-AS1P0CW21 52 aa5.69□□□□□ -1.5
HDAC9-219ENST00000461159 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-219ENST00000461159 GYPEP15421 78 aa5.69□□□□□ -1.5
HDAC9-219ENST00000461159 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
HDAC9-219ENST00000461159 DNAH7Q8WXX0 4024 aa5.68□□□□□ -1.5
HDAC9-219ENST00000461159 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
HDAC9-219ENST00000461159 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
HDAC9-219ENST00000461159 KPRPQ5T749 579 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-219ENST00000461159 COX17Q14061 63 aa5.67□□□□□ -1.5
HDAC9-219ENST00000461159 A0A1B0GUV1 79 aa5.67□□□□□ -1.5
HDAC9-219ENST00000461159 PRR3P79522 188 aaKnown RBP5.67□□□□□ -1.5
HDAC9-219ENST00000461159 MOBPQ13875 183 aa5.67□□□□□ -1.5
HDAC9-219ENST00000461159 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
HDAC9-219ENST00000461159 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
HDAC9-219ENST00000461159 A0A087X002 238 aa5.66□□□□□ -1.5
HDAC9-219ENST00000461159 A6NED7 52 aa5.66□□□□□ -1.5
HDAC9-219ENST00000461159 HAMPP81172 84 aa5.66□□□□□ -1.5
HDAC9-219ENST00000461159 ZNF706Q9Y5V0 76 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-219ENST00000461159 LOC101927531A0A1B0GV80 90 aa5.65□□□□□ -1.5
HDAC9-219ENST00000461159 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-219ENST00000461159 STARD9Q9P2P6 4700 aa5.65□□□□□ -1.51
HDAC9-219ENST00000461159 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
HDAC9-219ENST00000461159 LCE6AA0A183 80 aa5.64□□□□□ -1.51
HDAC9-219ENST00000461159 HIGD2AQ9BW72 106 aa5.64□□□□□ -1.51
HDAC9-219ENST00000461159 CLPSL2Q6UWE3 100 aa5.64□□□□□ -1.51
HDAC9-219ENST00000461159 LINC00575Q6W349 94 aa5.64□□□□□ -1.51
HDAC9-219ENST00000461159 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
HDAC9-219ENST00000461159 H3BQ85 93 aa5.63□□□□□ -1.51
HDAC9-219ENST00000461159 PLA2G1BP04054 148 aaKnown RBP5.63□□□□□ -1.51
HDAC9-219ENST00000461159 Q6ZQT0 140 aa5.63□□□□□ -1.51
HDAC9-219ENST00000461159 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
HDAC9-219ENST00000461159 DEFB131BA0A096LNP1 70 aa5.62□□□□□ -1.51
HDAC9-219ENST00000461159 PDE6GP18545 87 aa5.62□□□□□ -1.51
HDAC9-219ENST00000461159 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
HDAC9-219ENST00000461159 MUC7Q8TAX7 377 aa5.62□□□□□ -1.51
HDAC9-219ENST00000461159 ELOF1P60002 83 aaKnown RBP5.61□□□□□ -1.51
HDAC9-219ENST00000461159 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-219ENST00000461159 DNAH10Q8IVF4 4471 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms