RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MUC2Q02817 5179 aa7.65□□□□□ -1.18
HDAC4-207ENST00000461113 ZNF861PO60384 105 aa7.65□□□□□ -1.18
HDAC4-207ENST00000461113 SOSTDC1Q6X4U4 206 aa7.65□□□□□ -1.18
HDAC4-207ENST00000461113 FAM19A1Q7Z5A9 133 aa7.65□□□□□ -1.18
HDAC4-207ENST00000461113 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
HDAC4-207ENST00000461113 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 DLEU1O43261 78 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 PPDPFQ9H3Y8 114 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 LPAP08519 4548 aa7.64□□□□□ -1.19
HDAC4-207ENST00000461113 ETDCA0A1B0GVM5 59 aa7.63□□□□□ -1.19
HDAC4-207ENST00000461113 HINT1P49773 126 aaPredicted RBP7.63□□□□□ -1.19
HDAC4-207ENST00000461113 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
HDAC4-207ENST00000461113 C14orf144Q96I85 54 aa7.63□□□□□ -1.19
HDAC4-207ENST00000461113 KCNQ1DNQ9H478 68 aa7.63□□□□□ -1.19
HDAC4-207ENST00000461113 H0Y9J4 135 aa7.62□□□□□ -1.19
HDAC4-207ENST00000461113 PYY3Q5JQD4 70 aa7.62□□□□□ -1.19
HDAC4-207ENST00000461113 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
HDAC4-207ENST00000461113 TRAV23DV6A0A075B6W5 121 aa7.6□□□□□ -1.19
HDAC4-207ENST00000461113 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
HDAC4-207ENST00000461113 IGLV6-57P01721 117 aa7.6□□□□□ -1.19
HDAC4-207ENST00000461113 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
HDAC4-207ENST00000461113 TRAV13-2A0A0B4J235 113 aa7.59□□□□□ -1.19
HDAC4-207ENST00000461113 A6NDN8 102 aa7.59□□□□□ -1.19
HDAC4-207ENST00000461113 PRLHP81277 87 aa7.58□□□□□ -1.2
HDAC4-207ENST00000461113 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
HDAC4-207ENST00000461113 HIGD1BQ9P298 99 aa7.58□□□□□ -1.2
HDAC4-207ENST00000461113 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
HDAC4-207ENST00000461113 ZNF73O43830 326 aaPredicted RBP7.57□□□□□ -1.2
HDAC4-207ENST00000461113 KRTAP10-8P60410 259 aa7.57□□□□□ -1.2
HDAC4-207ENST00000461113 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
HDAC4-207ENST00000461113 SPRR1AP35321 89 aa7.56□□□□□ -1.2
HDAC4-207ENST00000461113 KRTAP13-1Q8IUC0 172 aa7.55□□□□□ -1.2
HDAC4-207ENST00000461113 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
HDAC4-207ENST00000461113 A4D1N5 150 aa7.54□□□□□ -1.2
HDAC4-207ENST00000461113 TAL2Q16559 108 aa7.54□□□□□ -1.2
HDAC4-207ENST00000461113 UQCR10Q9UDW1 63 aa7.54□□□□□ -1.2
HDAC4-207ENST00000461113 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
HDAC4-207ENST00000461113 A6NJY4 79 aa7.53□□□□□ -1.2
HDAC4-207ENST00000461113 B5MCH6 92 aa7.53□□□□□ -1.2
HDAC4-207ENST00000461113 SMIM6P0DI80 62 aa7.52□□□□□ -1.21
HDAC4-207ENST00000461113 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
HDAC4-207ENST00000461113 VAMP3Q15836 100 aa7.52□□□□□ -1.21
HDAC4-207ENST00000461113 Q6ZRX8 168 aa7.52□□□□□ -1.21
HDAC4-207ENST00000461113 RAB37Q96AX2 223 aa7.52□□□□□ -1.21
HDAC4-207ENST00000461113 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
HDAC4-207ENST00000461113 CRYGAP11844 174 aa7.51□□□□□ -1.21
HDAC4-207ENST00000461113 COX7BP24311 80 aa7.51□□□□□ -1.21
HDAC4-207ENST00000461113 C6orf99Q4VX62 202 aa7.51□□□□□ -1.21
HDAC4-207ENST00000461113 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
HDAC4-207ENST00000461113 C2orf91Q6ZV80 131 aa7.5□□□□□ -1.21
HDAC4-207ENST00000461113 CEND1Q8N111 149 aa7.5□□□□□ -1.21
HDAC4-207ENST00000461113 DHRS4-AS1Q9P1J3 65 aa7.5□□□□□ -1.21
HDAC4-207ENST00000461113 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
HDAC4-207ENST00000461113 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
HDAC4-207ENST00000461113 HSD52Q0P140 79 aa7.49□□□□□ -1.21
HDAC4-207ENST00000461113 C12orf57Q99622 126 aa7.49□□□□□ -1.21
HDAC4-207ENST00000461113 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
HDAC4-207ENST00000461113 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
HDAC4-207ENST00000461113 SLC25A20O43772 301 aa7.47□□□□□ -1.21
HDAC4-207ENST00000461113 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
HDAC4-207ENST00000461113 SMIM11BQ8TCY0 68 aa7.47□□□□□ -1.21
HDAC4-207ENST00000461113 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
HDAC4-207ENST00000461113 ELOF1P60002 83 aaKnown RBP7.46□□□□□ -1.22
HDAC4-207ENST00000461113 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
HDAC4-207ENST00000461113 A0A0B4J2C4 111 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 H7C2G1 150 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 SNCGO76070 127 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 Q1RN00 199 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 TYMSOSQ8TAI1 123 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 Q9BRP9 147 aa7.45□□□□□ -1.22
HDAC4-207ENST00000461113 LOC105371267A0A1B0GV96 52 aa7.44□□□□□ -1.22
HDAC4-207ENST00000461113 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
HDAC4-207ENST00000461113 CFC1P0CG37 223 aa7.44□□□□□ -1.22
HDAC4-207ENST00000461113 BVES-AS1Q5T3Y7 98 aa7.44□□□□□ -1.22
HDAC4-207ENST00000461113 PRO1933Q9H354 126 aa7.44□□□□□ -1.22
HDAC4-207ENST00000461113 TSTD3H0UI37 97 aa7.43□□□□□ -1.22
HDAC4-207ENST00000461113 ANAPC11Q9NYG5 84 aa7.43□□□□□ -1.22
HDAC4-207ENST00000461113 PRO1854Q9UHT4 67 aa7.43□□□□□ -1.22
HDAC4-207ENST00000461113 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
HDAC4-207ENST00000461113 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
HDAC4-207ENST00000461113 FXYD2P54710 66 aa7.41□□□□□ -1.22
HDAC4-207ENST00000461113 M0R143 59 aa7.4□□□□□ -1.22
HDAC4-207ENST00000461113 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
HDAC4-207ENST00000461113 A0A087X002 238 aa7.39□□□□□ -1.23
HDAC4-207ENST00000461113 H0YGX0 51 aa7.39□□□□□ -1.23
HDAC4-207ENST00000461113 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
HDAC4-207ENST00000461113 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
HDAC4-207ENST00000461113 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
HDAC4-207ENST00000461113 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
HDAC4-207ENST00000461113 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
HDAC4-207ENST00000461113 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
HDAC4-207ENST00000461113 TEX49A0A1B0GTD5 131 aa7.37□□□□□ -1.23
HDAC4-207ENST00000461113 hADV29S1A0JD25 119 aa7.37□□□□□ -1.23
HDAC4-207ENST00000461113 COX6CP09669 75 aa7.37□□□□□ -1.23
HDAC4-207ENST00000461113 PSMB2P49721 201 aa7.37□□□□□ -1.23
HDAC4-207ENST00000461113 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
HDAC4-207ENST00000461113 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms