RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 Q6ZVH6 145 aa13.02□□□□□ -0.33
SSNA1-202ENST00000459860 IGLV6-57P01721 117 aa13.01□□□□□ -0.33
SSNA1-202ENST00000459860 IFITM1P13164 125 aa13□□□□□ -0.33
SSNA1-202ENST00000459860 TRAV23DV6A0A075B6W5 121 aa12.99□□□□□ -0.33
SSNA1-202ENST00000459860 LINC00518Q8N0U6 118 aa12.99□□□□□ -0.33
SSNA1-202ENST00000459860 OR13C6PQ8NH95 151 aa12.99□□□□□ -0.33
SSNA1-202ENST00000459860 KRTAP4-16G5E9R7 235 aaPredicted RBP12.96□□□□□ -0.33
SSNA1-202ENST00000459860 CRYGAP11844 174 aa12.96□□□□□ -0.33
SSNA1-202ENST00000459860 PPDPFQ9H3Y8 114 aa12.96□□□□□ -0.33
SSNA1-202ENST00000459860 ZNF706Q9Y5V0 76 aaPredicted RBP12.95□□□□□ -0.34
SSNA1-202ENST00000459860 FAM229BQ4G0N7 80 aa12.94□□□□□ -0.34
SSNA1-202ENST00000459860 B5MCH6 92 aa12.93□□□□□ -0.34
SSNA1-202ENST00000459860 ZNF73O43830 326 aaPredicted RBP12.93□□□□□ -0.34
SSNA1-202ENST00000459860 HINT1P49773 126 aaPredicted RBP12.93□□□□□ -0.34
SSNA1-202ENST00000459860 MUSTN1Q8IVN3 82 aa12.93□□□□□ -0.34
SSNA1-202ENST00000459860 TMA7Q9Y2S6 64 aaKnown RBP12.93□□□□□ -0.34
SSNA1-202ENST00000459860 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
SSNA1-202ENST00000459860 Q6ZRX8 168 aa12.91□□□□□ -0.34
SSNA1-202ENST00000459860 A0A087X002 238 aa12.9□□□□□ -0.34
SSNA1-202ENST00000459860 SMCR5Q8TEV8 140 aa12.9□□□□□ -0.34
SSNA1-202ENST00000459860 ANAPC11Q9NYG5 84 aa12.9□□□□□ -0.34
SSNA1-202ENST00000459860 COX8AP10176 69 aa12.89□□□□□ -0.35
SSNA1-202ENST00000459860 TYMSOSQ8TAI1 123 aa12.89□□□□□ -0.35
SSNA1-202ENST00000459860 VAMP8Q9BV40 100 aa12.89□□□□□ -0.35
SSNA1-202ENST00000459860 SPRR4Q96PI1 79 aa12.88□□□□□ -0.35
SSNA1-202ENST00000459860 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
SSNA1-202ENST00000459860 A6NDN8 102 aa12.86□□□□□ -0.35
SSNA1-202ENST00000459860 SPATA45Q537H7 98 aa12.86□□□□□ -0.35
SSNA1-202ENST00000459860 DLEU1O43261 78 aa12.84□□□□□ -0.35
SSNA1-202ENST00000459860 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
SSNA1-202ENST00000459860 Q9BRP9 147 aa12.83□□□□□ -0.36
SSNA1-202ENST00000459860 KRTAP13-2Q52LG2 175 aa12.82□□□□□ -0.36
SSNA1-202ENST00000459860 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
SSNA1-202ENST00000459860 C14orf144Q96I85 54 aa12.81□□□□□ -0.36
SSNA1-202ENST00000459860 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
SSNA1-202ENST00000459860 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
SSNA1-202ENST00000459860 COX7BP24311 80 aa12.79□□□□□ -0.36
SSNA1-202ENST00000459860 SLC25A34Q6PIV7 304 aa12.79□□□□□ -0.36
SSNA1-202ENST00000459860 GAGE2AQ6NT46 116 aa12.78□□□□□ -0.36
SSNA1-202ENST00000459860 DHRS4-AS1Q9P1J3 65 aa12.78□□□□□ -0.36
SSNA1-202ENST00000459860 A4D1N5 150 aa12.77□□□□□ -0.37
SSNA1-202ENST00000459860 ELOF1P60002 83 aaKnown RBP12.76□□□□□ -0.37
SSNA1-202ENST00000459860 TRBV7-6A0A0J9YX20 115 aa12.75□□□□□ -0.37
SSNA1-202ENST00000459860 LINC00483Q53H64 154 aa12.75□□□□□ -0.37
SSNA1-202ENST00000459860 PYY3Q5JQD4 70 aa12.75□□□□□ -0.37
SSNA1-202ENST00000459860 C3orf22Q8N5N4 141 aa12.75□□□□□ -0.37
SSNA1-202ENST00000459860 LINC00304Q8N9R0 145 aa12.75□□□□□ -0.37
SSNA1-202ENST00000459860 HIGD1BQ9P298 99 aa12.74□□□□□ -0.37
SSNA1-202ENST00000459860 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
SSNA1-202ENST00000459860 TSPAN13O95857 204 aa12.71□□□□□ -0.37
SSNA1-202ENST00000459860 SMIM11BQ8TCY0 68 aa12.7□□□□□ -0.38
SSNA1-202ENST00000459860 ST20-AS1Q8NBB2 130 aa12.68□□□□□ -0.38
SSNA1-202ENST00000459860 C12orf57Q99622 126 aa12.68□□□□□ -0.38
SSNA1-202ENST00000459860 LPAP08519 4548 aa12.67□□□□□ -0.38
SSNA1-202ENST00000459860 IGLV9-49A0A0B4J1Y8 123 aa12.67□□□□□ -0.38
SSNA1-202ENST00000459860 VAMP3Q15836 100 aa12.67□□□□□ -0.38
SSNA1-202ENST00000459860 C2orf91Q6ZV80 131 aa12.67□□□□□ -0.38
SSNA1-202ENST00000459860 C4orf48Q5BLP8 95 aa12.66□□□□□ -0.38
SSNA1-202ENST00000459860 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
SSNA1-202ENST00000459860 TAL2Q16559 108 aa12.65□□□□□ -0.38
SSNA1-202ENST00000459860 SPAG11AQ6PDA7 123 aa12.65□□□□□ -0.38
SSNA1-202ENST00000459860 CTAG1AP78358 180 aa12.64□□□□□ -0.39
SSNA1-202ENST00000459860 MOBPQ13875 183 aa12.64□□□□□ -0.39
SSNA1-202ENST00000459860 Q8NBF4 154 aa12.64□□□□□ -0.39
SSNA1-202ENST00000459860 RAB37Q96AX2 223 aa12.64□□□□□ -0.39
SSNA1-202ENST00000459860 TMEM238LA0A1B0GVL6 79 aa12.62□□□□□ -0.39
SSNA1-202ENST00000459860 A6NJY4 79 aa12.62□□□□□ -0.39
SSNA1-202ENST00000459860 SLC25A20O43772 301 aa12.62□□□□□ -0.39
SSNA1-202ENST00000459860 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
SSNA1-202ENST00000459860 PRR4Q16378 134 aa12.61□□□□□ -0.39
SSNA1-202ENST00000459860 SSBP3-AS1Q7Z2R9 100 aa12.61□□□□□ -0.39
SSNA1-202ENST00000459860 SPRR1BP22528 89 aa12.6□□□□□ -0.39
SSNA1-202ENST00000459860 CEND1Q8N111 149 aa12.6□□□□□ -0.39
SSNA1-202ENST00000459860 DEFB105AQ8NG35 78 aa12.59□□□□□ -0.39
SSNA1-202ENST00000459860 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
SSNA1-202ENST00000459860 A0A0B4J2C4 111 aa12.58□□□□□ -0.4
SSNA1-202ENST00000459860 CFC1BP0CG36 223 aa12.58□□□□□ -0.4
SSNA1-202ENST00000459860 CFC1P0CG37 223 aa12.58□□□□□ -0.4
SSNA1-202ENST00000459860 TEX49A0A1B0GTD5 131 aa12.57□□□□□ -0.4
SSNA1-202ENST00000459860 H7C2G1 150 aa12.57□□□□□ -0.4
SSNA1-202ENST00000459860 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
SSNA1-202ENST00000459860 UQCR10Q9UDW1 63 aa12.57□□□□□ -0.4
SSNA1-202ENST00000459860 HSD52Q0P140 79 aa12.55□□□□□ -0.4
SSNA1-202ENST00000459860 SPINK1P00995 79 aa12.54□□□□□ -0.4
SSNA1-202ENST00000459860 Q1RN00 199 aa12.53□□□□□ -0.4
SSNA1-202ENST00000459860 LINC00575Q6W349 94 aa12.53□□□□□ -0.4
SSNA1-202ENST00000459860 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
SSNA1-202ENST00000459860 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
SSNA1-202ENST00000459860 FXYD2P54710 66 aa12.51□□□□□ -0.41
SSNA1-202ENST00000459860 RETNLBQ9BQ08 111 aa12.5□□□□□ -0.41
SSNA1-202ENST00000459860 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
SSNA1-202ENST00000459860 LINC01547P58512 204 aaPredicted RBP12.47□□□□□ -0.41
SSNA1-202ENST00000459860 SNCGO76070 127 aa12.46□□□□□ -0.41
SSNA1-202ENST00000459860 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.41
SSNA1-202ENST00000459860 Q6ZQY7 126 aa12.46□□□□□ -0.41
SSNA1-202ENST00000459860 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
SSNA1-202ENST00000459860 MUC2Q02817 5179 aa12.44□□□□□ -0.42
SSNA1-202ENST00000459860 H0YGX0 51 aa12.44□□□□□ -0.42
SSNA1-202ENST00000459860 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.43□□□□□ -0.42
SSNA1-202ENST00000459860 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms