RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
USP39-210ENST00000459775 DIRC1Q969H9 104 aa6.85□□□□□ -1.31
USP39-210ENST00000459775 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
USP39-210ENST00000459775 C7orf65Q6ZTY9 151 aa6.85□□□□□ -1.31
USP39-210ENST00000459775 LINC00474Q9P2X8 69 aa6.85□□□□□ -1.31
USP39-210ENST00000459775 LECT2O14960 151 aa6.84□□□□□ -1.31
USP39-210ENST00000459775 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.31
USP39-210ENST00000459775 CXCL6P80162 114 aa6.84□□□□□ -1.31
USP39-210ENST00000459775 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
USP39-210ENST00000459775 MIAQ16674 131 aa6.83□□□□□ -1.32
USP39-210ENST00000459775 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
USP39-210ENST00000459775 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
USP39-210ENST00000459775 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
USP39-210ENST00000459775 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
USP39-210ENST00000459775 TOMM7Q9P0U1 55 aa6.82□□□□□ -1.32
USP39-210ENST00000459775 H7BZZ5 65 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 NDUFC1O43677 76 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
USP39-210ENST00000459775 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 Q6ZR54 194 aa6.8□□□□□ -1.32
USP39-210ENST00000459775 BCE1O60756 84 aa6.79□□□□□ -1.32
USP39-210ENST00000459775 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
USP39-210ENST00000459775 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
USP39-210ENST00000459775 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
USP39-210ENST00000459775 ZNF625Q96I27 306 aaPredicted RBP6.79□□□□□ -1.32
USP39-210ENST00000459775 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP39-210ENST00000459775 Q6ZRN7 208 aaPredicted RBP6.78□□□□□ -1.32
USP39-210ENST00000459775 Q1T7F1 81 aa6.77□□□□□ -1.33
USP39-210ENST00000459775 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
USP39-210ENST00000459775 LEPROTO15243 131 aa6.77□□□□□ -1.33
USP39-210ENST00000459775 UBE2AP49459 152 aa6.77□□□□□ -1.33
USP39-210ENST00000459775 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
USP39-210ENST00000459775 A6NN06 94 aa6.76□□□□□ -1.33
USP39-210ENST00000459775 PSCAO43653 123 aa6.76□□□□□ -1.33
USP39-210ENST00000459775 C10orf25Q5T742 122 aa6.76□□□□□ -1.33
USP39-210ENST00000459775 COX7B2Q8TF08 81 aa6.76□□□□□ -1.33
USP39-210ENST00000459775 ZNF706Q9Y5V0 76 aaPredicted RBP6.76□□□□□ -1.33
USP39-210ENST00000459775 TRBV10-2A0A0K0K1G8 114 aa6.76□□□□□ -1.33
USP39-210ENST00000459775 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 LOC107984156A0A0G2JMH3 177 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 ZNF815PA8K554 130 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 SLPIP03973 132 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
USP39-210ENST00000459775 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 NDUFA12Q9UI09 145 aa6.75□□□□□ -1.33
USP39-210ENST00000459775 TRAV13-2A0A0B4J235 113 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 RMI2Q96E14 147 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 C1orf134Q5TEV5 83 aa6.74□□□□□ -1.33
USP39-210ENST00000459775 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
USP39-210ENST00000459775 LRCOL1A6NCL2 159 aa6.73□□□□□ -1.33
USP39-210ENST00000459775 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
USP39-210ENST00000459775 PRSS2P07478 247 aa6.73□□□□□ -1.33
USP39-210ENST00000459775 RTL8CO15255 209 aa6.72□□□□□ -1.33
USP39-210ENST00000459775 Q8IZM0 81 aa6.72□□□□□ -1.33
USP39-210ENST00000459775 DAND5Q8N907 189 aa6.72□□□□□ -1.33
USP39-210ENST00000459775 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
USP39-210ENST00000459775 S100A7L2Q5SY68 101 aa6.71□□□□□ -1.33
USP39-210ENST00000459775 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.33
USP39-210ENST00000459775 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
USP39-210ENST00000459775 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
USP39-210ENST00000459775 NDUFA1O15239 70 aa6.71□□□□□ -1.34
USP39-210ENST00000459775 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.34
USP39-210ENST00000459775 MPLKIPQ8TAP9 179 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 CAMK2N2Q96S95 79 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 FAM218AQ96MZ4 157 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
USP39-210ENST00000459775 A0A087WTM6 91 aa6.69□□□□□ -1.34
USP39-210ENST00000459775 FRAS1Q86XX4 4008 aa6.69□□□□□ -1.34
USP39-210ENST00000459775 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
USP39-210ENST00000459775 LITAFQ99732 161 aa6.68□□□□□ -1.34
USP39-210ENST00000459775 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
USP39-210ENST00000459775 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
USP39-210ENST00000459775 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
USP39-210ENST00000459775 LINC00158P58513 81 aa6.66□□□□□ -1.34
USP39-210ENST00000459775 Q8N814 137 aa6.66□□□□□ -1.34
USP39-210ENST00000459775 SMCR5Q8TEV8 140 aa6.66□□□□□ -1.34
USP39-210ENST00000459775 Q6JHZ5 121 aa6.65□□□□□ -1.34
USP39-210ENST00000459775 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
USP39-210ENST00000459775 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
USP39-210ENST00000459775 PKD1P98161 4303 aa6.65□□□□□ -1.35
USP39-210ENST00000459775 C20orf197Q8N268 126 aa6.65□□□□□ -1.35
USP39-210ENST00000459775 MIR7-3HGQ8N6C7 128 aa6.65□□□□□ -1.35
USP39-210ENST00000459775 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
USP39-210ENST00000459775 XAGE1AQ9HD64 81 aa6.64□□□□□ -1.35
USP39-210ENST00000459775 KIAA1109Q2LD37 5005 aa6.63□□□□□ -1.35
USP39-210ENST00000459775 Q6ZRP5 223 aa6.63□□□□□ -1.35
USP39-210ENST00000459775 Q8NDZ9 215 aa6.62□□□□□ -1.35
USP39-210ENST00000459775 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
USP39-210ENST00000459775 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms