RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 BATF3Q9NR55 127 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 SFTA2Q6UW10 78 aa7.6□□□□□ -1.19
SF3B4-202ENST00000457312 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
SF3B4-202ENST00000457312 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.19
SF3B4-202ENST00000457312 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
SF3B4-202ENST00000457312 TCL1BO95988 128 aa7.56□□□□□ -1.2
SF3B4-202ENST00000457312 SMIM13P0DJ93 91 aa7.56□□□□□ -1.2
SF3B4-202ENST00000457312 Q96NJ1 140 aa7.56□□□□□ -1.2
SF3B4-202ENST00000457312 A8MUU9 505 aa7.55□□□□□ -1.2
SF3B4-202ENST00000457312 IGLC3P0DOY3 106 aa7.55□□□□□ -1.2
SF3B4-202ENST00000457312 AKR1D1P51857 326 aa7.55□□□□□ -1.2
SF3B4-202ENST00000457312 MIR7-3HGQ8N6C7 128 aa7.55□□□□□ -1.2
SF3B4-202ENST00000457312 G0S2P27469 103 aa7.54□□□□□ -1.2
SF3B4-202ENST00000457312 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
SF3B4-202ENST00000457312 KRTAP16-1A8MUX0 517 aa7.53□□□□□ -1.2
SF3B4-202ENST00000457312 IGFL1Q6UW32 110 aa7.53□□□□□ -1.2
SF3B4-202ENST00000457312 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
SF3B4-202ENST00000457312 TRAV23DV6A0A075B6W5 121 aa7.52□□□□□ -1.21
SF3B4-202ENST00000457312 ATP6V1G1O75348 118 aa7.52□□□□□ -1.21
SF3B4-202ENST00000457312 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
SF3B4-202ENST00000457312 SPRR2DP22532 72 aa7.51□□□□□ -1.21
SF3B4-202ENST00000457312 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
SF3B4-202ENST00000457312 ZNF73O43830 326 aaPredicted RBP7.5□□□□□ -1.21
SF3B4-202ENST00000457312 MT1BP07438 61 aa7.49□□□□□ -1.21
SF3B4-202ENST00000457312 FA2HQ7L5A8 372 aa7.48□□□□□ -1.21
SF3B4-202ENST00000457312 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
SF3B4-202ENST00000457312 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
SF3B4-202ENST00000457312 ADIRFQ15847 76 aa7.45□□□□□ -1.22
SF3B4-202ENST00000457312 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
SF3B4-202ENST00000457312 NDUFA13Q9P0J0 144 aa7.45□□□□□ -1.22
SF3B4-202ENST00000457312 S100A7L2Q5SY68 101 aa7.44□□□□□ -1.22
SF3B4-202ENST00000457312 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
SF3B4-202ENST00000457312 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
SF3B4-202ENST00000457312 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
SF3B4-202ENST00000457312 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
SF3B4-202ENST00000457312 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
SF3B4-202ENST00000457312 TAL2Q16559 108 aa7.4□□□□□ -1.22
SF3B4-202ENST00000457312 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
SF3B4-202ENST00000457312 TEX49A0A1B0GTD5 131 aa7.39□□□□□ -1.23
SF3B4-202ENST00000457312 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
SF3B4-202ENST00000457312 NDUFA6P56556 154 aa7.39□□□□□ -1.23
SF3B4-202ENST00000457312 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
SF3B4-202ENST00000457312 HINT1P49773 126 aaPredicted RBP7.37□□□□□ -1.23
SF3B4-202ENST00000457312 MTURNQ8N3F0 131 aa7.37□□□□□ -1.23
SF3B4-202ENST00000457312 GHRHP01286 108 aa7.36□□□□□ -1.23
SF3B4-202ENST00000457312 DSTQ03001 7570 aaKnown RBP7.34□□□□□ -1.23
SF3B4-202ENST00000457312 Q5VV11 94 aa7.34□□□□□ -1.23
SF3B4-202ENST00000457312 NAT8Q9UHE5 227 aa7.34□□□□□ -1.23
SF3B4-202ENST00000457312 HERV-K104P63124 156 aa7.33□□□□□ -1.24
SF3B4-202ENST00000457312 LINC01546A6NGU7 62 aa7.32□□□□□ -1.24
SF3B4-202ENST00000457312 NDUFC2O95298 119 aa7.32□□□□□ -1.24
SF3B4-202ENST00000457312 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
SF3B4-202ENST00000457312 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
SF3B4-202ENST00000457312 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
SF3B4-202ENST00000457312 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
SF3B4-202ENST00000457312 BLOC1S1P78537 153 aa7.29□□□□□ -1.24
SF3B4-202ENST00000457312 SLC51BQ86UW2 128 aa7.28□□□□□ -1.24
SF3B4-202ENST00000457312 IGLV5-48A0A075B6I7 105 aa7.27□□□□□ -1.25
SF3B4-202ENST00000457312 ELOF1P60002 83 aaKnown RBP7.27□□□□□ -1.25
SF3B4-202ENST00000457312 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
SF3B4-202ENST00000457312 COMMD7Q86VX2 200 aa7.25□□□□□ -1.25
SF3B4-202ENST00000457312 MIEN1Q9BRT3 115 aa7.25□□□□□ -1.25
SF3B4-202ENST00000457312 CBY1Q9Y3M2 126 aa7.25□□□□□ -1.25
SF3B4-202ENST00000457312 COX7BP24311 80 aa7.23□□□□□ -1.25
SF3B4-202ENST00000457312 HBDP02042 147 aa7.22□□□□□ -1.25
SF3B4-202ENST00000457312 DSCR10P59022 87 aa7.22□□□□□ -1.25
SF3B4-202ENST00000457312 A0A096LNJ9 63 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 MYMXA0A1B0GTQ4 84 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 C9JQL5 133 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.26
SF3B4-202ENST00000457312 SOSTDC1Q6X4U4 206 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 BAGE3Q86Y29 109 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
SF3B4-202ENST00000457312 LST1O00453 97 aa7.2□□□□□ -1.26
SF3B4-202ENST00000457312 AHNAK2Q8IVF2 5795 aa7.17□□□□□ -1.26
SF3B4-202ENST00000457312 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
SF3B4-202ENST00000457312 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
SF3B4-202ENST00000457312 RPS10P5Q9NQ39 176 aa7.16□□□□□ -1.26
SF3B4-202ENST00000457312 A0A1W2PNM2 257 aa7.15□□□□□ -1.26
SF3B4-202ENST00000457312 TSPEAR-AS2P59090 65 aa7.15□□□□□ -1.26
SF3B4-202ENST00000457312 NPC2P61916 151 aa7.14□□□□□ -1.27
SF3B4-202ENST00000457312 FAM218AQ96MZ4 157 aa7.14□□□□□ -1.27
SF3B4-202ENST00000457312 SMCO4Q9NRQ5 59 aa7.14□□□□□ -1.27
SF3B4-202ENST00000457312 RHEBQ15382 184 aa7.13□□□□□ -1.27
SF3B4-202ENST00000457312 OR13C6PQ8NH95 151 aa7.13□□□□□ -1.27
SF3B4-202ENST00000457312 F8WEM9 126 aa7.12□□□□□ -1.27
SF3B4-202ENST00000457312 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
SF3B4-202ENST00000457312 Q6JHZ5 121 aa7.1□□□□□ -1.27
SF3B4-202ENST00000457312 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
SF3B4-202ENST00000457312 IMUPQ9GZP8 106 aa7.07□□□□□ -1.28
SF3B4-202ENST00000457312 IFITM2Q01629 132 aa7.06□□□□□ -1.28
SF3B4-202ENST00000457312 PMCHL1Q16048 86 aa7.06□□□□□ -1.28
SF3B4-202ENST00000457312 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
SF3B4-202ENST00000457312 SPINK7P58062 85 aa7.05□□□□□ -1.28
SF3B4-202ENST00000457312 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SF3B4-202ENST00000457312 ADAMTSL4-AS1Q5T5F5 129 aa7.04□□□□□ -1.28
SF3B4-202ENST00000457312 KRTAP5-10Q6L8G5 202 aa7.04□□□□□ -1.28
SF3B4-202ENST00000457312 WFDC13Q8IUB5 93 aa7.04□□□□□ -1.28
SF3B4-202ENST00000457312 TRBV7-6A0A0J9YX20 115 aa7.03□□□□□ -1.28
SF3B4-202ENST00000457312 URB1-AS1Q96HZ7 61 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms