RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX7B2Q8TF08 81 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 NDUFA12Q9UI09 145 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGKV2D-24A0A075B6R9 120 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 NBDYA0A0U1RRE5 68 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 RMI2Q96E14 147 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 TOMM7Q9P0U1 55 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.88
HMGB1P4-201ENST00000455362 A0A087WYN8 130 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 NDUFA1O15239 70 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 APOMO95445 188 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q5XG85 94 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q8IZM0 81 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 TIMM17BO60830 172 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 C2orf82Q6UX34 121 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q6ZR54 194 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00526Q96FQ7 95 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 GVQW2A0A096LPI5 108 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 A0A1B0GX51 115 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 M0R2N4 97 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 LY6G6CO95867 125 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPAG11BQ08648 103 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 CIRBPQ14011 172 aaKnown RBP3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SFTA2Q6UW10 78 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 TMEM126AQ9H061 195 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SMIM13P0DJ93 91 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00313P59037 77 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 GTF2H5Q6ZYL4 71 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 PRO0461Q9UI25 63 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 LRCOL1A6NCL2 159 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 C9JAW5 83 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 LECT2O14960 151 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 PSCAO43653 123 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 NDUFC2O95298 119 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00158P58513 81 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 COX17Q14061 63 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 WFDC2Q14508 124 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 C9orf116Q5BN46 136 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 MEIG1Q5JSS6 88 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 HRCT1Q6UXD1 115 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 DAND5Q8N907 189 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 J3KT08 172 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 K7ERS5 55 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 IFITM1P13164 125 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 FXYD2P54710 66 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 MIR7-3HGQ8N6C7 128 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 C6orf48Q9UBA6 75 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 PKD1P98161 4303 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 KRTAP29-1A8MX34 341 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 C1orf134Q5TEV5 83 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 COPS9Q8WXC6 57 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 RYR2Q92736 4967 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 A0A087WTM6 91 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 A0A1W2PPM0 123 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 NPC2P61916 151 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 DNAH5Q8TE73 4624 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 LCE6AA0A183 80 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 H3BUT2 72 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 RTL8CO15255 209 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 Q6Q795 121 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 SPCS1Q9Y6A9 102 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 K7ERJ3 54 aa3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 LST1O00453 97 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms