RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
CCDC90B-202ENST00000455220 LINC00528Q8N1L1 170 aa10.26□□□□□ -0.77
CCDC90B-202ENST00000455220 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-202ENST00000455220 BATFQ16520 125 aa10.24□□□□□ -0.77
CCDC90B-202ENST00000455220 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
CCDC90B-202ENST00000455220 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
CCDC90B-202ENST00000455220 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-202ENST00000455220 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-202ENST00000455220 BCE1O60756 84 aa10.22□□□□□ -0.77
CCDC90B-202ENST00000455220 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-202ENST00000455220 H7C2G1 150 aa10.21□□□□□ -0.78
CCDC90B-202ENST00000455220 C6orf99Q4VX62 202 aa10.21□□□□□ -0.78
CCDC90B-202ENST00000455220 DIRC1Q969H9 104 aa10.21□□□□□ -0.78
CCDC90B-202ENST00000455220 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
CCDC90B-202ENST00000455220 TSPAN13O95857 204 aa10.19□□□□□ -0.78
CCDC90B-202ENST00000455220 RPL37AP61513 92 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-202ENST00000455220 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
CCDC90B-202ENST00000455220 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CCDC90B-202ENST00000455220 Q1RN00 199 aa10.18□□□□□ -0.78
CCDC90B-202ENST00000455220 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
CCDC90B-202ENST00000455220 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
CCDC90B-202ENST00000455220 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
CCDC90B-202ENST00000455220 B5MCH6 92 aa10.17□□□□□ -0.78
CCDC90B-202ENST00000455220 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
CCDC90B-202ENST00000455220 H0Y9J4 135 aa10.16□□□□□ -0.78
CCDC90B-202ENST00000455220 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
CCDC90B-202ENST00000455220 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
CCDC90B-202ENST00000455220 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-202ENST00000455220 Q6ZRX8 168 aa10.15□□□□□ -0.78
CCDC90B-202ENST00000455220 Q8N1X5 172 aa10.15□□□□□ -0.78
CCDC90B-202ENST00000455220 TRIAP1O43715 76 aa10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 PRLHP81277 87 aa10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 COX7BP24311 80 aa10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 UBE2AP49459 152 aa10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 Q5VSD8 79 aa10.14□□□□□ -0.79
CCDC90B-202ENST00000455220 TAX1BP3O14907 124 aa10.13□□□□□ -0.79
CCDC90B-202ENST00000455220 ZNF861PO60384 105 aa10.13□□□□□ -0.79
CCDC90B-202ENST00000455220 VAMP3Q15836 100 aa10.13□□□□□ -0.79
CCDC90B-202ENST00000455220 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
CCDC90B-202ENST00000455220 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
CCDC90B-202ENST00000455220 PSMB2P49721 201 aa10.11□□□□□ -0.79
CCDC90B-202ENST00000455220 Q9BRP9 147 aa10.11□□□□□ -0.79
CCDC90B-202ENST00000455220 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
CCDC90B-202ENST00000455220 H0YGX0 51 aa10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 C9orf118A6NHY6 69 aa10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 COX6CP09669 75 aa10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 NAA38Q9BRA0 125 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-202ENST00000455220 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
CCDC90B-202ENST00000455220 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
CCDC90B-202ENST00000455220 HIGD2AQ9BW72 106 aa10.07□□□□□ -0.8
CCDC90B-202ENST00000455220 H3BUT2 72 aa10.06□□□□□ -0.8
CCDC90B-202ENST00000455220 FAM218AQ96MZ4 157 aa10.05□□□□□ -0.8
CCDC90B-202ENST00000455220 ERC2-IT1O76042 136 aa10.05□□□□□ -0.8
CCDC90B-202ENST00000455220 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
CCDC90B-202ENST00000455220 ABCA13Q86UQ4 5058 aa10.04□□□□□ -0.8
CCDC90B-202ENST00000455220 SCGB1C2P0DMR2 95 aa10.04□□□□□ -0.8
CCDC90B-202ENST00000455220 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
CCDC90B-202ENST00000455220 A0A1B0GX51 115 aa10.03□□□□□ -0.8
CCDC90B-202ENST00000455220 SLC25A20O43772 301 aa10.03□□□□□ -0.8
CCDC90B-202ENST00000455220 A0A1W2PPM0 123 aa10.02□□□□□ -0.81
CCDC90B-202ENST00000455220 hADV29S1A0JD25 119 aa10.02□□□□□ -0.81
CCDC90B-202ENST00000455220 LCE2DQ5TA82 110 aaPredicted RBP10.01□□□□□ -0.81
CCDC90B-202ENST00000455220 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
CCDC90B-202ENST00000455220 LST1O00453 97 aa10□□□□□ -0.81
CCDC90B-202ENST00000455220 SNCGO76070 127 aa9.98□□□□□ -0.81
CCDC90B-202ENST00000455220 TCL1BO95988 128 aa9.98□□□□□ -0.81
CCDC90B-202ENST00000455220 FABP2P12104 132 aa9.98□□□□□ -0.81
CCDC90B-202ENST00000455220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 SPRR4Q96PI1 79 aa9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 TRACP01848 142 aa9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
CCDC90B-202ENST00000455220 Q6ZQY7 126 aa9.96□□□□□ -0.82
CCDC90B-202ENST00000455220 FAT3Q8TDW7 4589 aa9.96□□□□□ -0.82
CCDC90B-202ENST00000455220 IGLV5-48A0A075B6I7 105 aa9.95□□□□□ -0.82
CCDC90B-202ENST00000455220 LINC01547P58512 204 aaPredicted RBP9.95□□□□□ -0.82
CCDC90B-202ENST00000455220 ATXN8Q156A1 80 aa9.95□□□□□ -0.82
CCDC90B-202ENST00000455220 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
CCDC90B-202ENST00000455220 SPRR1BP22528 89 aa9.93□□□□□ -0.82
CCDC90B-202ENST00000455220 LINC00483Q53H64 154 aa9.93□□□□□ -0.82
CCDC90B-202ENST00000455220 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-202ENST00000455220 DNAL4O96015 105 aa9.92□□□□□ -0.82
CCDC90B-202ENST00000455220 OCIAD2Q56VL3 154 aa9.92□□□□□ -0.82
CCDC90B-202ENST00000455220 GAGE2AQ6NT46 116 aa9.92□□□□□ -0.82
CCDC90B-202ENST00000455220 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
CCDC90B-202ENST00000455220 MYCBP2O75592 4640 aa9.92□□□□□ -0.82
CCDC90B-202ENST00000455220 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.82
CCDC90B-202ENST00000455220 Q8N377 158 aa9.9□□□□□ -0.82
CCDC90B-202ENST00000455220 FLG2Q5D862 2391 aaPredicted RBP9.9□□□□□ -0.83
CCDC90B-202ENST00000455220 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
CCDC90B-202ENST00000455220 PPDPFLQ8WWR9 84 aa9.89□□□□□ -0.83
CCDC90B-202ENST00000455220 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
CCDC90B-202ENST00000455220 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
CCDC90B-202ENST00000455220 K7EP34 96 aa9.88□□□□□ -0.83
CCDC90B-202ENST00000455220 GHRHP01286 108 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms