RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
HDAC9-217ENST00000455069 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
HDAC9-217ENST00000455069 DDTP30046 118 aa6.66□□□□□ -1.34
HDAC9-217ENST00000455069 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
HDAC9-217ENST00000455069 S100A6P06703 90 aa6.65□□□□□ -1.34
HDAC9-217ENST00000455069 S100A2P29034 98 aa6.65□□□□□ -1.34
HDAC9-217ENST00000455069 SNRPEP62304 92 aaKnown RBP6.65□□□□□ -1.34
HDAC9-217ENST00000455069 PCP2Q8IVA1 136 aa6.65□□□□□ -1.34
HDAC9-217ENST00000455069 B5MCH6 92 aa6.64□□□□□ -1.35
HDAC9-217ENST00000455069 CRYGAP11844 174 aa6.64□□□□□ -1.35
HDAC9-217ENST00000455069 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
HDAC9-217ENST00000455069 ETDCA0A1B0GVM5 59 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 FAM229BQ4G0N7 80 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
HDAC9-217ENST00000455069 TRAV23DV6A0A075B6W5 121 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 AKR1D1P51857 326 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 TYMSOSQ8TAI1 123 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 Q9BRP9 147 aa6.62□□□□□ -1.35
HDAC9-217ENST00000455069 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
HDAC9-217ENST00000455069 Q6ZRX8 168 aa6.61□□□□□ -1.35
HDAC9-217ENST00000455069 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
HDAC9-217ENST00000455069 ZNF73O43830 326 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-217ENST00000455069 S100A12P80511 92 aa6.59□□□□□ -1.35
HDAC9-217ENST00000455069 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
HDAC9-217ENST00000455069 LPAP08519 4548 aa6.57□□□□□ -1.36
HDAC9-217ENST00000455069 TSPAN13O95857 204 aa6.57□□□□□ -1.36
HDAC9-217ENST00000455069 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
HDAC9-217ENST00000455069 MUSTN1Q8IVN3 82 aa6.57□□□□□ -1.36
HDAC9-217ENST00000455069 OR13C6PQ8NH95 151 aa6.57□□□□□ -1.36
HDAC9-217ENST00000455069 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-217ENST00000455069 SCGB1D1O95968 90 aa6.56□□□□□ -1.36
HDAC9-217ENST00000455069 IFITM1P13164 125 aa6.56□□□□□ -1.36
HDAC9-217ENST00000455069 Q6ZVH6 145 aa6.56□□□□□ -1.36
HDAC9-217ENST00000455069 HSBP1L1C9JCN9 74 aa6.55□□□□□ -1.36
HDAC9-217ENST00000455069 LINC00518Q8N0U6 118 aa6.55□□□□□ -1.36
HDAC9-217ENST00000455069 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
HDAC9-217ENST00000455069 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
HDAC9-217ENST00000455069 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
HDAC9-217ENST00000455069 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
HDAC9-217ENST00000455069 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-217ENST00000455069 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-217ENST00000455069 C6orf99Q4VX62 202 aa6.53□□□□□ -1.36
HDAC9-217ENST00000455069 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
HDAC9-217ENST00000455069 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
HDAC9-217ENST00000455069 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
HDAC9-217ENST00000455069 CBY1Q9Y3M2 126 aa6.52□□□□□ -1.37
HDAC9-217ENST00000455069 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
HDAC9-217ENST00000455069 COX8AP10176 69 aa6.51□□□□□ -1.37
HDAC9-217ENST00000455069 PRR4Q16378 134 aa6.51□□□□□ -1.37
HDAC9-217ENST00000455069 A6NDN8 102 aa6.5□□□□□ -1.37
HDAC9-217ENST00000455069 HINT1P49773 126 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-217ENST00000455069 Q8NBF4 154 aa6.5□□□□□ -1.37
HDAC9-217ENST00000455069 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
HDAC9-217ENST00000455069 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
HDAC9-217ENST00000455069 A4D1N5 150 aa6.49□□□□□ -1.37
HDAC9-217ENST00000455069 COX7BP24311 80 aa6.49□□□□□ -1.37
HDAC9-217ENST00000455069 MOBPQ13875 183 aa6.49□□□□□ -1.37
HDAC9-217ENST00000455069 PAM16Q9Y3D7 125 aa6.49□□□□□ -1.37
HDAC9-217ENST00000455069 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
HDAC9-217ENST00000455069 SMIM11BQ8TCY0 68 aa6.48□□□□□ -1.37
HDAC9-217ENST00000455069 DHRS4-AS1Q9P1J3 65 aa6.48□□□□□ -1.37
HDAC9-217ENST00000455069 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
HDAC9-217ENST00000455069 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
HDAC9-217ENST00000455069 DLEU1O43261 78 aa6.47□□□□□ -1.37
HDAC9-217ENST00000455069 SPRR1BP22528 89 aa6.47□□□□□ -1.37
HDAC9-217ENST00000455069 C14orf144Q96I85 54 aa6.47□□□□□ -1.37
HDAC9-217ENST00000455069 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
HDAC9-217ENST00000455069 CTAG1AP78358 180 aa6.46□□□□□ -1.38
HDAC9-217ENST00000455069 SPAG11AQ6PDA7 123 aa6.46□□□□□ -1.38
HDAC9-217ENST00000455069 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
HDAC9-217ENST00000455069 PYY3Q5JQD4 70 aa6.45□□□□□ -1.38
HDAC9-217ENST00000455069 C2orf91Q6ZV80 131 aa6.45□□□□□ -1.38
HDAC9-217ENST00000455069 C12orf57Q99622 126 aa6.45□□□□□ -1.38
HDAC9-217ENST00000455069 KRTAP4-12Q9BQ66 201 aa6.45□□□□□ -1.38
HDAC9-217ENST00000455069 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
HDAC9-217ENST00000455069 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-217ENST00000455069 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
HDAC9-217ENST00000455069 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
HDAC9-217ENST00000455069 MUC2Q02817 5179 aa6.44□□□□□ -1.38
HDAC9-217ENST00000455069 C9orf153Q5TBE3 101 aa6.43□□□□□ -1.38
HDAC9-217ENST00000455069 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
HDAC9-217ENST00000455069 SPINK1P00995 79 aa6.42□□□□□ -1.38
HDAC9-217ENST00000455069 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
HDAC9-217ENST00000455069 SLC25A34Q6PIV7 304 aa6.41□□□□□ -1.38
HDAC9-217ENST00000455069 SMIM29Q86T20 159 aa6.41□□□□□ -1.38
HDAC9-217ENST00000455069 DEFB105AQ8NG35 78 aa6.41□□□□□ -1.38
HDAC9-217ENST00000455069 Q1RN00 199 aa6.4□□□□□ -1.38
HDAC9-217ENST00000455069 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
HDAC9-217ENST00000455069 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
HDAC9-217ENST00000455069 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
HDAC9-217ENST00000455069 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
HDAC9-217ENST00000455069 CFC1P0CG37 223 aa6.39□□□□□ -1.39
HDAC9-217ENST00000455069 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
HDAC9-217ENST00000455069 TAL2Q16559 108 aa6.39□□□□□ -1.39
HDAC9-217ENST00000455069 Q8N377 158 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms