RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
LYSMD3-202ENST00000453259 TRAPPC1Q9Y5R8 145 aa7.73□□□□□ -1.17
LYSMD3-202ENST00000453259 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
LYSMD3-202ENST00000453259 M0R2T5 61 aa7.72□□□□□ -1.17
LYSMD3-202ENST00000453259 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 SPRR1BP22528 89 aa7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
LYSMD3-202ENST00000453259 CD164Q04900 197 aa7.7□□□□□ -1.18
LYSMD3-202ENST00000453259 NMUP48645 174 aa7.69□□□□□ -1.18
LYSMD3-202ENST00000453259 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
LYSMD3-202ENST00000453259 LEPROTO15243 131 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 Q5XG85 94 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 RPS10P5Q9NQ39 176 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 ST20-AS1Q8NBB2 130 aa7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 PLNP26678 52 aa7.65□□□□□ -1.18
LYSMD3-202ENST00000453259 J3QQQ9 107 aa7.64□□□□□ -1.19
LYSMD3-202ENST00000453259 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-202ENST00000453259 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
LYSMD3-202ENST00000453259 HERVK_113P61574 105 aa7.63□□□□□ -1.19
LYSMD3-202ENST00000453259 PRO1933Q9H354 126 aa7.62□□□□□ -1.19
LYSMD3-202ENST00000453259 HSBP1O75506 76 aa7.61□□□□□ -1.19
LYSMD3-202ENST00000453259 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
LYSMD3-202ENST00000453259 H7C2G1 150 aa7.6□□□□□ -1.19
LYSMD3-202ENST00000453259 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
LYSMD3-202ENST00000453259 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
LYSMD3-202ENST00000453259 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-202ENST00000453259 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
LYSMD3-202ENST00000453259 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 DPM2O94777 84 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 AKR1D1P51857 326 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 ELOF1P60002 83 aaKnown RBP7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 SPANXDQ9BXN6 97 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 H0Y8G0 127 aa7.55□□□□□ -1.2
LYSMD3-202ENST00000453259 CFC1P0CG37 223 aa7.55□□□□□ -1.2
LYSMD3-202ENST00000453259 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
LYSMD3-202ENST00000453259 TAL2Q16559 108 aa7.54□□□□□ -1.2
LYSMD3-202ENST00000453259 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 SNAPINO95295 136 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 IGKCP01834 107 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 Q1RN00 199 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 OR13C6PQ8NH95 151 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 COX7BP24311 80 aa7.52□□□□□ -1.21
LYSMD3-202ENST00000453259 SVBPQ8N300 66 aa7.52□□□□□ -1.21
LYSMD3-202ENST00000453259 TIMM17BO60830 172 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 TCL1BO95988 128 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 NPC2P61916 151 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 E9PLD3 99 aa7.5□□□□□ -1.21
LYSMD3-202ENST00000453259 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
LYSMD3-202ENST00000453259 IGLV5-48A0A075B6I7 105 aa7.49□□□□□ -1.21
LYSMD3-202ENST00000453259 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
LYSMD3-202ENST00000453259 APOC3P02656 99 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 LITAFQ99732 161 aa7.47□□□□□ -1.21
LYSMD3-202ENST00000453259 A0A1B0GWB2 263 aa7.46□□□□□ -1.22
LYSMD3-202ENST00000453259 SERF1AO75920 110 aa7.45□□□□□ -1.22
LYSMD3-202ENST00000453259 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
LYSMD3-202ENST00000453259 A4D1N5 150 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 Q75L30 129 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-202ENST00000453259 LINC00310P59036 64 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 Q6Q795 121 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 FABP4P15090 132 aa7.41□□□□□ -1.22
LYSMD3-202ENST00000453259 TRGC2P03986 189 aa7.39□□□□□ -1.23
LYSMD3-202ENST00000453259 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
LYSMD3-202ENST00000453259 C20orf202A1L168 122 aa7.38□□□□□ -1.23
LYSMD3-202ENST00000453259 F8WEM9 126 aa7.38□□□□□ -1.23
LYSMD3-202ENST00000453259 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 Q6JHZ5 121 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 USH2AO75445 5202 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 A0A0G2JQZ4 141 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 PCP2Q8IVA1 136 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 IFITM1P13164 125 aa7.35□□□□□ -1.23
LYSMD3-202ENST00000453259 SYS1-DBNDD2H3BUS1 97 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 Q6ZVH6 145 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 A6NDN8 102 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms