RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CSNK1G2-AS1Q8NCQ2 148 aa5.5□□□□□ -1.53
SMCO1-202ENST00000452776 DMXL2Q8TDJ6 3036 aa5.5□□□□□ -1.53
SMCO1-202ENST00000452776 H0Y9P7 68 aa5.49□□□□□ -1.53
SMCO1-202ENST00000452776 H3BS24 57 aa5.49□□□□□ -1.53
SMCO1-202ENST00000452776 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
SMCO1-202ENST00000452776 COA5Q86WW8 74 aa5.49□□□□□ -1.53
SMCO1-202ENST00000452776 C9orf163Q8N9P6 203 aa5.49□□□□□ -1.53
SMCO1-202ENST00000452776 PLAC8Q9NZF1 115 aa5.49□□□□□ -1.53
SMCO1-202ENST00000452776 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
SMCO1-202ENST00000452776 OTOGLQ3ZCN5 2332 aa5.48□□□□□ -1.53
SMCO1-202ENST00000452776 IGKV2D-24A0A075B6R9 120 aa5.48□□□□□ -1.53
SMCO1-202ENST00000452776 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
SMCO1-202ENST00000452776 GIG44P09565 113 aaPredicted RBP5.48□□□□□ -1.53
SMCO1-202ENST00000452776 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SMCO1-202ENST00000452776 Q6YL49 198 aa5.48□□□□□ -1.53
SMCO1-202ENST00000452776 ANKHD1Q8IWZ3 2542 aaKnown RBP5.48□□□□□ -1.53
SMCO1-202ENST00000452776 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
SMCO1-202ENST00000452776 A0A1W2PPR1 153 aa5.47□□□□□ -1.53
SMCO1-202ENST00000452776 XAGE1AQ9HD64 81 aa5.47□□□□□ -1.53
SMCO1-202ENST00000452776 APC2O95996 2303 aa5.46□□□□□ -1.53
SMCO1-202ENST00000452776 DEFB136Q30KP8 78 aa5.46□□□□□ -1.53
SMCO1-202ENST00000452776 DEFB105AQ8NG35 78 aa5.46□□□□□ -1.53
SMCO1-202ENST00000452776 PRR34Q9NV39 138 aa5.46□□□□□ -1.53
SMCO1-202ENST00000452776 CEP295Q9C0D2 2601 aa5.46□□□□□ -1.54
SMCO1-202ENST00000452776 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
SMCO1-202ENST00000452776 SMG1Q96Q15 3661 aaKnown RBP5.45□□□□□ -1.54
SMCO1-202ENST00000452776 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
SMCO1-202ENST00000452776 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
SMCO1-202ENST00000452776 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
SMCO1-202ENST00000452776 SORL1Q92673 2214 aa5.44□□□□□ -1.54
SMCO1-202ENST00000452776 KRTAP29-1A8MX34 341 aaPredicted RBP5.44□□□□□ -1.54
SMCO1-202ENST00000452776 LELP1Q5T871 98 aa5.44□□□□□ -1.54
SMCO1-202ENST00000452776 COL6A6A6NMZ7 2263 aa5.44□□□□□ -1.54
SMCO1-202ENST00000452776 PRB2P02812 416 aaPredicted RBP5.44□□□□□ -1.54
SMCO1-202ENST00000452776 LINC00313P59037 77 aa5.43□□□□□ -1.54
SMCO1-202ENST00000452776 C18orf65Q6ZTR6 163 aa5.43□□□□□ -1.54
SMCO1-202ENST00000452776 CCL19Q99731 98 aa5.43□□□□□ -1.54
SMCO1-202ENST00000452776 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
SMCO1-202ENST00000452776 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
SMCO1-202ENST00000452776 Q6ZRX8 168 aa5.42□□□□□ -1.54
SMCO1-202ENST00000452776 TP53AIP1Q9HCN2 124 aa5.42□□□□□ -1.54
SMCO1-202ENST00000452776 WFDC13Q8IUB5 93 aa5.41□□□□□ -1.54
SMCO1-202ENST00000452776 TEP1Q99973 2627 aaKnown RBP5.41□□□□□ -1.54
SMCO1-202ENST00000452776 ITPR1Q14643 2758 aa5.41□□□□□ -1.54
SMCO1-202ENST00000452776 RPL37AP8A6NKH3 93 aa5.41□□□□□ -1.54
SMCO1-202ENST00000452776 MYO18BQ8IUG5 2567 aa5.4□□□□□ -1.54
SMCO1-202ENST00000452776 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.54
SMCO1-202ENST00000452776 WFDC10BQ8IUB3 73 aa5.4□□□□□ -1.54
SMCO1-202ENST00000452776 IGSF10Q6WRI0 2623 aa5.4□□□□□ -1.55
SMCO1-202ENST00000452776 IGF2RP11717 2491 aa5.39□□□□□ -1.55
SMCO1-202ENST00000452776 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
SMCO1-202ENST00000452776 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
SMCO1-202ENST00000452776 TENM4Q6N022 2769 aa5.39□□□□□ -1.55
SMCO1-202ENST00000452776 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
SMCO1-202ENST00000452776 PTPN13Q12923 2485 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 ANKRD17O75179 2603 aaKnown RBP5.38□□□□□ -1.55
SMCO1-202ENST00000452776 A0A096LPF7 62 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 SPRR1AP35321 89 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 Q8NAQ8 132 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 HECTD1Q9ULT8 2610 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 AKAP13Q12802 2813 aa5.38□□□□□ -1.55
SMCO1-202ENST00000452776 WNK1Q9H4A3 2382 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 SPENQ96T58 3664 aaKnown RBP5.37□□□□□ -1.55
SMCO1-202ENST00000452776 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 FSHBP01225 129 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 DEFB131BA0A096LNP1 70 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 A8MWP4 228 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 IGLV1-51P01701 117 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 SPINK7P58062 85 aa5.37□□□□□ -1.55
SMCO1-202ENST00000452776 RETNLBQ9BQ08 111 aa5.36□□□□□ -1.55
SMCO1-202ENST00000452776 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
SMCO1-202ENST00000452776 AKAP6Q13023 2319 aa5.35□□□□□ -1.55
SMCO1-202ENST00000452776 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
SMCO1-202ENST00000452776 LINC00476Q8WZB0 136 aa5.35□□□□□ -1.55
SMCO1-202ENST00000452776 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 CREBBPQ92793 2442 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 DNAJC9-AS1A6NH13 148 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 DEFB116Q30KQ4 102 aa5.34□□□□□ -1.55
SMCO1-202ENST00000452776 TEX15Q9BXT5 2789 aa5.33□□□□□ -1.56
SMCO1-202ENST00000452776 CR1P17927 2039 aa5.33□□□□□ -1.56
SMCO1-202ENST00000452776 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
SMCO1-202ENST00000452776 SPTA1P02549 2419 aa5.32□□□□□ -1.56
SMCO1-202ENST00000452776 LRBAP50851 2863 aa5.32□□□□□ -1.56
SMCO1-202ENST00000452776 A0A087WSZ3 146 aa5.31□□□□□ -1.56
SMCO1-202ENST00000452776 Q6ZR54 194 aa5.31□□□□□ -1.56
SMCO1-202ENST00000452776 DOPEY1Q5JWR5 2465 aa5.31□□□□□ -1.56
SMCO1-202ENST00000452776 RTL8CO15255 209 aa5.3□□□□□ -1.56
SMCO1-202ENST00000452776 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
SMCO1-202ENST00000452776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMCO1-202ENST00000452776 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
SMCO1-202ENST00000452776 MYO9AB2RTY4 2548 aa5.3□□□□□ -1.56
SMCO1-202ENST00000452776 ABCA12Q86UK0 2595 aa5.3□□□□□ -1.56
SMCO1-202ENST00000452776 HRES1P13985 223 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms