RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
TRAPPC12-211ENST00000452495 A6NJY4 79 aa8.9□□□□□ -0.98
TRAPPC12-211ENST00000452495 SPRR1AP35321 89 aa8.9□□□□□ -0.98
TRAPPC12-211ENST00000452495 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
TRAPPC12-211ENST00000452495 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 ZNF861PO60384 105 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 UBE2AP49459 152 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 TAL2Q16559 108 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 LINC00337Q8N6G1 96 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 DIRC1Q969H9 104 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 UQCR10Q9UDW1 63 aa8.89□□□□□ -0.99
TRAPPC12-211ENST00000452495 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
TRAPPC12-211ENST00000452495 KRTAP13-1Q8IUC0 172 aa8.88□□□□□ -0.99
TRAPPC12-211ENST00000452495 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
TRAPPC12-211ENST00000452495 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC12-211ENST00000452495 H0Y9J4 135 aa8.87□□□□□ -0.99
TRAPPC12-211ENST00000452495 XP32Q5T750 250 aa8.87□□□□□ -0.99
TRAPPC12-211ENST00000452495 TRAV13-2A0A0B4J235 113 aa8.86□□□□□ -0.99
TRAPPC12-211ENST00000452495 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
TRAPPC12-211ENST00000452495 A4D1N5 150 aa8.86□□□□□ -0.99
TRAPPC12-211ENST00000452495 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC12-211ENST00000452495 PRLHP81277 87 aa8.85□□□□□ -0.99
TRAPPC12-211ENST00000452495 A6NDN8 102 aa8.84□□□□□ -0.99
TRAPPC12-211ENST00000452495 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC12-211ENST00000452495 HSD52Q0P140 79 aa8.83□□□□□ -1
TRAPPC12-211ENST00000452495 CEND1Q8N111 149 aa8.83□□□□□ -1
TRAPPC12-211ENST00000452495 TMEM238LA0A1B0GVL6 79 aa8.82□□□□□ -1
TRAPPC12-211ENST00000452495 OXTP01178 125 aa8.82□□□□□ -1
TRAPPC12-211ENST00000452495 Q6ZRX8 168 aa8.82□□□□□ -1
TRAPPC12-211ENST00000452495 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
TRAPPC12-211ENST00000452495 B5MCH6 92 aa8.81□□□□□ -1
TRAPPC12-211ENST00000452495 HINT1P49773 126 aaPredicted RBP8.81□□□□□ -1
TRAPPC12-211ENST00000452495 C12orf57Q99622 126 aa8.8□□□□□ -1
TRAPPC12-211ENST00000452495 A0A0B4J2C4 111 aa8.79□□□□□ -1
TRAPPC12-211ENST00000452495 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
TRAPPC12-211ENST00000452495 PRO1933Q9H354 126 aa8.79□□□□□ -1
TRAPPC12-211ENST00000452495 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
TRAPPC12-211ENST00000452495 RPL13AP40429 203 aaKnown RBP8.78□□□□□ -1
TRAPPC12-211ENST00000452495 C6orf99Q4VX62 202 aa8.78□□□□□ -1
TRAPPC12-211ENST00000452495 MYCBP2O75592 4640 aa8.77□□□□□ -1
TRAPPC12-211ENST00000452495 TSTD3H0UI37 97 aa8.77□□□□□ -1.01
TRAPPC12-211ENST00000452495 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
TRAPPC12-211ENST00000452495 CFC1P0CG37 223 aa8.77□□□□□ -1.01
TRAPPC12-211ENST00000452495 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
TRAPPC12-211ENST00000452495 LINC01600Q96MT4 127 aa8.77□□□□□ -1.01
TRAPPC12-211ENST00000452495 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 FXYD2P54710 66 aa8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 ZNF706Q9Y5V0 76 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC12-211ENST00000452495 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
TRAPPC12-211ENST00000452495 COX7BP24311 80 aa8.75□□□□□ -1.01
TRAPPC12-211ENST00000452495 Q9BRP9 147 aa8.75□□□□□ -1.01
TRAPPC12-211ENST00000452495 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
TRAPPC12-211ENST00000452495 PRO1854Q9UHT4 67 aa8.72□□□□□ -1.01
TRAPPC12-211ENST00000452495 VAMP3Q15836 100 aa8.71□□□□□ -1.02
TRAPPC12-211ENST00000452495 FAM229BQ4G0N7 80 aa8.71□□□□□ -1.02
TRAPPC12-211ENST00000452495 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
TRAPPC12-211ENST00000452495 NHP2Q9NX24 153 aaKnown RBP8.71□□□□□ -1.02
TRAPPC12-211ENST00000452495 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.02
TRAPPC12-211ENST00000452495 M0R143 59 aa8.7□□□□□ -1.02
TRAPPC12-211ENST00000452495 BVES-AS1Q5T3Y7 98 aa8.7□□□□□ -1.02
TRAPPC12-211ENST00000452495 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-211ENST00000452495 DMBT1Q9UGM3 2413 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC12-211ENST00000452495 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
TRAPPC12-211ENST00000452495 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
TRAPPC12-211ENST00000452495 H7C2G1 150 aa8.68□□□□□ -1.02
TRAPPC12-211ENST00000452495 CRYGAP11844 174 aa8.68□□□□□ -1.02
TRAPPC12-211ENST00000452495 CTAG1AP78358 180 aa8.68□□□□□ -1.02
TRAPPC12-211ENST00000452495 Q1RN00 199 aa8.68□□□□□ -1.02
TRAPPC12-211ENST00000452495 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
TRAPPC12-211ENST00000452495 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
TRAPPC12-211ENST00000452495 SLC25A20O43772 301 aa8.66□□□□□ -1.02
TRAPPC12-211ENST00000452495 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
TRAPPC12-211ENST00000452495 A0A087X002 238 aa8.65□□□□□ -1.02
TRAPPC12-211ENST00000452495 K7ERJ3 54 aa8.65□□□□□ -1.02
TRAPPC12-211ENST00000452495 GAGE2AQ6NT46 116 aa8.63□□□□□ -1.03
TRAPPC12-211ENST00000452495 LINC00575Q6W349 94 aa8.63□□□□□ -1.03
TRAPPC12-211ENST00000452495 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
TRAPPC12-211ENST00000452495 H0YGX0 51 aa8.62□□□□□ -1.03
TRAPPC12-211ENST00000452495 ST20-AS1Q8NBB2 130 aa8.62□□□□□ -1.03
TRAPPC12-211ENST00000452495 hADV29S1A0JD25 119 aa8.61□□□□□ -1.03
TRAPPC12-211ENST00000452495 TSPAN13O95857 204 aa8.61□□□□□ -1.03
TRAPPC12-211ENST00000452495 SPRR1BP22528 89 aa8.61□□□□□ -1.03
TRAPPC12-211ENST00000452495 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
TRAPPC12-211ENST00000452495 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
TRAPPC12-211ENST00000452495 TRIAP1O43715 76 aa8.6□□□□□ -1.03
TRAPPC12-211ENST00000452495 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
TRAPPC12-211ENST00000452495 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
TRAPPC12-211ENST00000452495 SNCGO76070 127 aa8.59□□□□□ -1.03
TRAPPC12-211ENST00000452495 PSMB2P49721 201 aa8.59□□□□□ -1.03
TRAPPC12-211ENST00000452495 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
TRAPPC12-211ENST00000452495 COX6CP09669 75 aa8.58□□□□□ -1.04
TRAPPC12-211ENST00000452495 TNXBP22105 4242 aa8.58□□□□□ -1.04
TRAPPC12-211ENST00000452495 A0A1B0GX51 115 aa8.57□□□□□ -1.04
TRAPPC12-211ENST00000452495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC12-211ENST00000452495 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
TRAPPC12-211ENST00000452495 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-211ENST00000452495 Q6ZQY7 126 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms