RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 A4D1N5 150 aa7.28□□□□□ -1.24
LINC00339-205ENST00000452322 LINC00337Q8N6G1 96 aa7.28□□□□□ -1.24
LINC00339-205ENST00000452322 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
LINC00339-205ENST00000452322 CBY1Q9Y3M2 126 aa7.28□□□□□ -1.24
LINC00339-205ENST00000452322 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
LINC00339-205ENST00000452322 INAFM2P0DMQ5 153 aa7.27□□□□□ -1.25
LINC00339-205ENST00000452322 SPRR1AP35321 89 aa7.27□□□□□ -1.25
LINC00339-205ENST00000452322 C12orf57Q99622 126 aa7.27□□□□□ -1.25
LINC00339-205ENST00000452322 TRAV13-2A0A0B4J235 113 aa7.26□□□□□ -1.25
LINC00339-205ENST00000452322 ZNF861PO60384 105 aa7.26□□□□□ -1.25
LINC00339-205ENST00000452322 SPINK6Q6UWN8 80 aa7.26□□□□□ -1.25
LINC00339-205ENST00000452322 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
LINC00339-205ENST00000452322 MYCBP2O75592 4640 aa7.26□□□□□ -1.25
LINC00339-205ENST00000452322 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
LINC00339-205ENST00000452322 UBE2AP49459 152 aa7.25□□□□□ -1.25
LINC00339-205ENST00000452322 HSD52Q0P140 79 aa7.25□□□□□ -1.25
LINC00339-205ENST00000452322 FAM19A1Q7Z5A9 133 aa7.25□□□□□ -1.25
LINC00339-205ENST00000452322 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
LINC00339-205ENST00000452322 CEND1Q8N111 149 aa7.25□□□□□ -1.25
LINC00339-205ENST00000452322 A6NDN8 102 aa7.24□□□□□ -1.25
LINC00339-205ENST00000452322 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
LINC00339-205ENST00000452322 FAT3Q8TDW7 4589 aa7.23□□□□□ -1.25
LINC00339-205ENST00000452322 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
LINC00339-205ENST00000452322 H0Y9J4 135 aa7.23□□□□□ -1.25
LINC00339-205ENST00000452322 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
LINC00339-205ENST00000452322 PRLHP81277 87 aa7.23□□□□□ -1.25
LINC00339-205ENST00000452322 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
LINC00339-205ENST00000452322 TMEM238LA0A1B0GVL6 79 aa7.22□□□□□ -1.25
LINC00339-205ENST00000452322 A6NJY4 79 aa7.22□□□□□ -1.25
LINC00339-205ENST00000452322 TSTD3H0UI37 97 aa7.22□□□□□ -1.25
LINC00339-205ENST00000452322 FXYD2P54710 66 aa7.21□□□□□ -1.25
LINC00339-205ENST00000452322 LRP1Q07954 4544 aaKnown RBP7.21□□□□□ -1.26
LINC00339-205ENST00000452322 A0A0B4J2C4 111 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 B5MCH6 92 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 CFC1P0CG37 223 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
LINC00339-205ENST00000452322 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
LINC00339-205ENST00000452322 C6orf99Q4VX62 202 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 Q6ZRX8 168 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 RAB37Q96AX2 223 aa7.2□□□□□ -1.26
LINC00339-205ENST00000452322 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
LINC00339-205ENST00000452322 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
LINC00339-205ENST00000452322 TRBV7-6A0A0J9YX20 115 aa7.18□□□□□ -1.26
LINC00339-205ENST00000452322 HIGD2AQ9BW72 106 aa7.18□□□□□ -1.26
LINC00339-205ENST00000452322 ELOF1P60002 83 aaKnown RBP7.17□□□□□ -1.26
LINC00339-205ENST00000452322 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
LINC00339-205ENST00000452322 COX7BP24311 80 aa7.16□□□□□ -1.26
LINC00339-205ENST00000452322 CTAG1AP78358 180 aa7.16□□□□□ -1.26
LINC00339-205ENST00000452322 BVES-AS1Q5T3Y7 98 aa7.16□□□□□ -1.26
LINC00339-205ENST00000452322 Q9BRP9 147 aa7.16□□□□□ -1.26
LINC00339-205ENST00000452322 NHP2Q9NX24 153 aaKnown RBP7.16□□□□□ -1.26
LINC00339-205ENST00000452322 A0A1B0GWB2 263 aa7.15□□□□□ -1.26
LINC00339-205ENST00000452322 OXTP01178 125 aa7.15□□□□□ -1.26
LINC00339-205ENST00000452322 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.26
LINC00339-205ENST00000452322 M0R143 59 aa7.14□□□□□ -1.27
LINC00339-205ENST00000452322 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
LINC00339-205ENST00000452322 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
LINC00339-205ENST00000452322 H7C2G1 150 aa7.13□□□□□ -1.27
LINC00339-205ENST00000452322 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
LINC00339-205ENST00000452322 DHRS4-AS1Q9P1J3 65 aa7.13□□□□□ -1.27
LINC00339-205ENST00000452322 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
LINC00339-205ENST00000452322 K7ERJ3 54 aa7.12□□□□□ -1.27
LINC00339-205ENST00000452322 ERC2-IT1O76042 136 aa7.12□□□□□ -1.27
LINC00339-205ENST00000452322 VAMP3Q15836 100 aa7.12□□□□□ -1.27
LINC00339-205ENST00000452322 TNXBP22105 4242 aa7.12□□□□□ -1.27
LINC00339-205ENST00000452322 Q1RN00 199 aa7.11□□□□□ -1.27
LINC00339-205ENST00000452322 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
LINC00339-205ENST00000452322 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
LINC00339-205ENST00000452322 SLC25A20O43772 301 aa7.08□□□□□ -1.28
LINC00339-205ENST00000452322 TSPAN13O95857 204 aa7.08□□□□□ -1.28
LINC00339-205ENST00000452322 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
LINC00339-205ENST00000452322 LINC00575Q6W349 94 aa7.08□□□□□ -1.28
LINC00339-205ENST00000452322 H0YGX0 51 aa7.07□□□□□ -1.28
LINC00339-205ENST00000452322 MT1HL1P0DM35 61 aa7.07□□□□□ -1.28
LINC00339-205ENST00000452322 CRYGAP11844 174 aa7.07□□□□□ -1.28
LINC00339-205ENST00000452322 PRR26Q8N8Z3 221 aa7.07□□□□□ -1.28
LINC00339-205ENST00000452322 ANAPC11Q9NYG5 84 aa7.07□□□□□ -1.28
LINC00339-205ENST00000452322 A0A087X002 238 aa7.06□□□□□ -1.28
LINC00339-205ENST00000452322 TRIAP1O43715 76 aa7.06□□□□□ -1.28
LINC00339-205ENST00000452322 KRTAP10-8P60410 259 aa7.06□□□□□ -1.28
LINC00339-205ENST00000452322 GAGE2AQ6NT46 116 aa7.06□□□□□ -1.28
LINC00339-205ENST00000452322 ST20-AS1Q8NBB2 130 aa7.06□□□□□ -1.28
LINC00339-205ENST00000452322 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
LINC00339-205ENST00000452322 PSMB2P49721 201 aa7.05□□□□□ -1.28
LINC00339-205ENST00000452322 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
LINC00339-205ENST00000452322 COX6CP09669 75 aa7.04□□□□□ -1.28
LINC00339-205ENST00000452322 SPRR1BP22528 89 aa7.04□□□□□ -1.28
LINC00339-205ENST00000452322 BATFQ16520 125 aa7.04□□□□□ -1.28
LINC00339-205ENST00000452322 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
LINC00339-205ENST00000452322 A0A1B0GX51 115 aa7.02□□□□□ -1.29
LINC00339-205ENST00000452322 SNCGO76070 127 aa7.02□□□□□ -1.29
LINC00339-205ENST00000452322 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
LINC00339-205ENST00000452322 FAM218AQ96MZ4 157 aa7.02□□□□□ -1.29
LINC00339-205ENST00000452322 HERC1Q15751 4861 aa7.01□□□□□ -1.29
LINC00339-205ENST00000452322 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
LINC00339-205ENST00000452322 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-205ENST00000452322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
LINC00339-205ENST00000452322 Q6ZQY7 126 aa7.01□□□□□ -1.29
LINC00339-205ENST00000452322 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms