RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 KRTAP4-16G5E9R7 235 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-207ENST00000451876 C12orf57Q99622 126 aa14.61□□□□□ -0.07
CPSF4-207ENST00000451876 UBE2AP49459 152 aa14.6□□□□□ -0.07
CPSF4-207ENST00000451876 TAL2Q16559 108 aa14.59□□□□□ -0.07
CPSF4-207ENST00000451876 A6NDN8 102 aa14.59□□□□□ -0.07
CPSF4-207ENST00000451876 RPL28P46779 137 aaKnown RBP14.58□□□□□ -0.08
CPSF4-207ENST00000451876 CEND1Q8N111 149 aa14.58□□□□□ -0.08
CPSF4-207ENST00000451876 LRP1Q07954 4544 aaKnown RBP14.57□□□□□ -0.08
CPSF4-207ENST00000451876 H0Y9J4 135 aa14.56□□□□□ -0.08
CPSF4-207ENST00000451876 ZNF73O43830 326 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-207ENST00000451876 TRAV13-2A0A0B4J235 113 aa14.55□□□□□ -0.08
CPSF4-207ENST00000451876 ETDCA0A1B0GVM5 59 aa14.55□□□□□ -0.08
CPSF4-207ENST00000451876 DIRC1Q969H9 104 aa14.55□□□□□ -0.08
CPSF4-207ENST00000451876 HSD52Q0P140 79 aa14.54□□□□□ -0.08
CPSF4-207ENST00000451876 FXYD2P54710 66 aa14.53□□□□□ -0.08
CPSF4-207ENST00000451876 B5MCH6 92 aa14.52□□□□□ -0.08
CPSF4-207ENST00000451876 CBY1Q9Y3M2 126 aa14.52□□□□□ -0.09
CPSF4-207ENST00000451876 FAT3Q8TDW7 4589 aa14.51□□□□□ -0.09
CPSF4-207ENST00000451876 CFC1BP0CG36 223 aa14.51□□□□□ -0.09
CPSF4-207ENST00000451876 CFC1P0CG37 223 aa14.51□□□□□ -0.09
CPSF4-207ENST00000451876 HIGD2AQ9BW72 106 aa14.51□□□□□ -0.09
CPSF4-207ENST00000451876 C6orf99Q4VX62 202 aa14.5□□□□□ -0.09
CPSF4-207ENST00000451876 Q6ZRX8 168 aa14.5□□□□□ -0.09
CPSF4-207ENST00000451876 SMIM11BQ8TCY0 68 aa14.48□□□□□ -0.09
CPSF4-207ENST00000451876 RPL13AP40429 203 aaKnown RBP14.48□□□□□ -0.09
CPSF4-207ENST00000451876 SMCR5Q8TEV8 140 aa14.47□□□□□ -0.09
CPSF4-207ENST00000451876 Q9BRP9 147 aa14.47□□□□□ -0.09
CPSF4-207ENST00000451876 A0A0B4J2C4 111 aa14.46□□□□□ -0.09
CPSF4-207ENST00000451876 TMEM238LA0A1B0GVL6 79 aa14.46□□□□□ -0.09
CPSF4-207ENST00000451876 A6NJY4 79 aa14.46□□□□□ -0.09
CPSF4-207ENST00000451876 TSTD3H0UI37 97 aa14.45□□□□□ -0.1
CPSF4-207ENST00000451876 KRTAP1-4P0C5Y4 121 aa14.45□□□□□ -0.1
CPSF4-207ENST00000451876 RAB37Q96AX2 223 aa14.44□□□□□ -0.1
CPSF4-207ENST00000451876 HINT1P49773 126 aaPredicted RBP14.43□□□□□ -0.1
CPSF4-207ENST00000451876 ELOF1P60002 83 aaKnown RBP14.42□□□□□ -0.1
CPSF4-207ENST00000451876 CTAG1AP78358 180 aa14.41□□□□□ -0.1
CPSF4-207ENST00000451876 NHP2Q9NX24 153 aaKnown RBP14.41□□□□□ -0.1
CPSF4-207ENST00000451876 KRTAP29-1A8MX34 341 aaPredicted RBP14.41□□□□□ -0.1
CPSF4-207ENST00000451876 ERC2-IT1O76042 136 aa14.41□□□□□ -0.1
CPSF4-207ENST00000451876 H7C2G1 150 aa14.4□□□□□ -0.1
CPSF4-207ENST00000451876 OXTP01178 125 aa14.4□□□□□ -0.1
CPSF4-207ENST00000451876 COX7BP24311 80 aa14.4□□□□□ -0.1
CPSF4-207ENST00000451876 BVES-AS1Q5T3Y7 98 aa14.39□□□□□ -0.11
CPSF4-207ENST00000451876 LINC01600Q96MT4 127 aa14.39□□□□□ -0.11
CPSF4-207ENST00000451876 TRBV7-6A0A0J9YX20 115 aa14.38□□□□□ -0.11
CPSF4-207ENST00000451876 K7ERJ3 54 aa14.38□□□□□ -0.11
CPSF4-207ENST00000451876 PRO1854Q9UHT4 67 aa14.37□□□□□ -0.11
CPSF4-207ENST00000451876 ANAPC11Q9NYG5 84 aa14.37□□□□□ -0.11
CPSF4-207ENST00000451876 A0A1B0GWB2 263 aa14.36□□□□□ -0.11
CPSF4-207ENST00000451876 MT1HL1P0DM35 61 aa14.33□□□□□ -0.11
CPSF4-207ENST00000451876 SPRR4Q96PI1 79 aa14.33□□□□□ -0.11
CPSF4-207ENST00000451876 TNXBP22105 4242 aa14.33□□□□□ -0.12
CPSF4-207ENST00000451876 PRR26Q8N8Z3 221 aa14.33□□□□□ -0.12
CPSF4-207ENST00000451876 DHRS4-AS1Q9P1J3 65 aa14.32□□□□□ -0.12
CPSF4-207ENST00000451876 Q1RN00 199 aa14.31□□□□□ -0.12
CPSF4-207ENST00000451876 A0A087X002 238 aa14.3□□□□□ -0.12
CPSF4-207ENST00000451876 DMBT1Q9UGM3 2413 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-207ENST00000451876 J3QL48 77 aa14.29□□□□□ -0.12
CPSF4-207ENST00000451876 M0R143 59 aa14.29□□□□□ -0.12
CPSF4-207ENST00000451876 ST20-AS1Q8NBB2 130 aa14.29□□□□□ -0.12
CPSF4-207ENST00000451876 ZNF706Q9Y5V0 76 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-207ENST00000451876 VAMP3Q15836 100 aa14.28□□□□□ -0.12
CPSF4-207ENST00000451876 KRTAP10-8P60410 259 aa14.27□□□□□ -0.12
CPSF4-207ENST00000451876 GAGE2AQ6NT46 116 aa14.26□□□□□ -0.13
CPSF4-207ENST00000451876 FAM229BQ4G0N7 80 aa14.24□□□□□ -0.13
CPSF4-207ENST00000451876 LINC00575Q6W349 94 aa14.24□□□□□ -0.13
CPSF4-207ENST00000451876 TSPAN13O95857 204 aa14.23□□□□□ -0.13
CPSF4-207ENST00000451876 CRYGAP11844 174 aa14.23□□□□□ -0.13
CPSF4-207ENST00000451876 LINC00483Q53H64 154 aa14.23□□□□□ -0.13
CPSF4-207ENST00000451876 TRIAP1O43715 76 aa14.23□□□□□ -0.13
CPSF4-207ENST00000451876 KRTAP13-2Q52LG2 175 aa14.22□□□□□ -0.13
CPSF4-207ENST00000451876 SLC25A20O43772 301 aa14.19□□□□□ -0.14
CPSF4-207ENST00000451876 BATFQ16520 125 aa14.19□□□□□ -0.14
CPSF4-207ENST00000451876 hADV29S1A0JD25 119 aa14.18□□□□□ -0.14
CPSF4-207ENST00000451876 FAM218AQ96MZ4 157 aa14.18□□□□□ -0.14
CPSF4-207ENST00000451876 C3orf22Q8N5N4 141 aa14.17□□□□□ -0.14
CPSF4-207ENST00000451876 H0YGX0 51 aa14.16□□□□□ -0.14
CPSF4-207ENST00000451876 PSMB2P49721 201 aa14.16□□□□□ -0.14
CPSF4-207ENST00000451876 DEFB105AQ8NG35 78 aa14.15□□□□□ -0.14
CPSF4-207ENST00000451876 LINC01547P58512 204 aaPredicted RBP14.15□□□□□ -0.14
CPSF4-207ENST00000451876 SPRR1BP22528 89 aa14.14□□□□□ -0.15
CPSF4-207ENST00000451876 Q6ZQY7 126 aa14.14□□□□□ -0.15
CPSF4-207ENST00000451876 TYMSOSQ8TAI1 123 aa14.14□□□□□ -0.15
CPSF4-207ENST00000451876 HERC1Q15751 4861 aa14.13□□□□□ -0.15
CPSF4-207ENST00000451876 IGLV5-48A0A075B6I7 105 aa14.12□□□□□ -0.15
CPSF4-207ENST00000451876 CLEC2BQ92478 149 aa14.12□□□□□ -0.15
CPSF4-207ENST00000451876 IGLV9-49A0A0B4J1Y8 123 aa14.09□□□□□ -0.15
CPSF4-207ENST00000451876 TEX49A0A1B0GTD5 131 aa14.09□□□□□ -0.15
CPSF4-207ENST00000451876 NAA38Q9BRA0 125 aaKnown RBP14.08□□□□□ -0.15
CPSF4-207ENST00000451876 COX6CP09669 75 aa14.08□□□□□ -0.16
CPSF4-207ENST00000451876 Q8N377 158 aa14.08□□□□□ -0.16
CPSF4-207ENST00000451876 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-207ENST00000451876 MOBPQ13875 183 aa14.06□□□□□ -0.16
CPSF4-207ENST00000451876 PCP4L1A6NKN8 68 aa14.05□□□□□ -0.16
CPSF4-207ENST00000451876 SMIM29Q86T20 159 aa14.05□□□□□ -0.16
CPSF4-207ENST00000451876 SNHG12Q9BXW3 62 aa14.05□□□□□ -0.16
CPSF4-207ENST00000451876 A0A1B0GX51 115 aa14.03□□□□□ -0.16
CPSF4-207ENST00000451876 SNCGO76070 127 aa14.01□□□□□ -0.17
CPSF4-207ENST00000451876 SCGB1C2P0DMR2 95 aa14.01□□□□□ -0.17
CPSF4-207ENST00000451876 C9orf153Q5TBE3 101 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms