RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 IGKV2-24A0A0C4DH68 120 aa10.77□□□□□ -0.69
PRPF40A-204ENST00000450303 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.69
PRPF40A-204ENST00000450303 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
PRPF40A-204ENST00000450303 LINC00474Q9P2X8 69 aa10.77□□□□□ -0.69
PRPF40A-204ENST00000450303 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
PRPF40A-204ENST00000450303 GAGE2EQ4V326 116 aa10.76□□□□□ -0.69
PRPF40A-204ENST00000450303 GAGE2DQ9UEU5 116 aa10.76□□□□□ -0.69
PRPF40A-204ENST00000450303 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
PRPF40A-204ENST00000450303 LRP1Q07954 4544 aaKnown RBP10.76□□□□□ -0.69
PRPF40A-204ENST00000450303 Q6ZRP5 223 aa10.75□□□□□ -0.69
PRPF40A-204ENST00000450303 MIR7-3HGQ8N6C7 128 aa10.75□□□□□ -0.69
PRPF40A-204ENST00000450303 VPS25Q9BRG1 176 aa10.75□□□□□ -0.69
PRPF40A-204ENST00000450303 PKHD1L1Q86WI1 4243 aa10.75□□□□□ -0.69
PRPF40A-204ENST00000450303 TRIAP1O43715 76 aa10.74□□□□□ -0.69
PRPF40A-204ENST00000450303 A0A096LNI7 61 aa10.73□□□□□ -0.69
PRPF40A-204ENST00000450303 M0QXV9 152 aa10.73□□□□□ -0.69
PRPF40A-204ENST00000450303 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
PRPF40A-204ENST00000450303 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
PRPF40A-204ENST00000450303 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
PRPF40A-204ENST00000450303 FAT3Q8TDW7 4589 aa10.72□□□□□ -0.69
PRPF40A-204ENST00000450303 OXTP01178 125 aa10.71□□□□□ -0.69
PRPF40A-204ENST00000450303 ETDBQ3ZM63 59 aa10.71□□□□□ -0.69
PRPF40A-204ENST00000450303 C9JAW5 83 aa10.7□□□□□ -0.7
PRPF40A-204ENST00000450303 XAGE1AQ9HD64 81 aa10.7□□□□□ -0.7
PRPF40A-204ENST00000450303 SLC25A20O43772 301 aa10.69□□□□□ -0.7
PRPF40A-204ENST00000450303 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
PRPF40A-204ENST00000450303 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
PRPF40A-204ENST00000450303 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
PRPF40A-204ENST00000450303 C7orf33Q8WU49 177 aa10.67□□□□□ -0.7
PRPF40A-204ENST00000450303 PPDPFLQ8WWR9 84 aa10.67□□□□□ -0.7
PRPF40A-204ENST00000450303 LST1O00453 97 aa10.66□□□□□ -0.7
PRPF40A-204ENST00000450303 C9orf129Q5T035 196 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-204ENST00000450303 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-204ENST00000450303 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.7
PRPF40A-204ENST00000450303 PLA2G2DQ9UNK4 145 aa10.65□□□□□ -0.7
PRPF40A-204ENST00000450303 H3BT86 120 aa10.64□□□□□ -0.71
PRPF40A-204ENST00000450303 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
PRPF40A-204ENST00000450303 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
PRPF40A-204ENST00000450303 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
PRPF40A-204ENST00000450303 NDUFC2O95298 119 aa10.61□□□□□ -0.71
PRPF40A-204ENST00000450303 FAM19A5Q7Z5A7 132 aaPredicted RBP10.61□□□□□ -0.71
PRPF40A-204ENST00000450303 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
PRPF40A-204ENST00000450303 CLEC2BQ92478 149 aa10.61□□□□□ -0.71
PRPF40A-204ENST00000450303 A0A1W2PNN7 141 aa10.6□□□□□ -0.71
PRPF40A-204ENST00000450303 H0YGX0 51 aa10.6□□□□□ -0.71
PRPF40A-204ENST00000450303 TRACP01848 142 aa10.6□□□□□ -0.71
PRPF40A-204ENST00000450303 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 FAM168BA1KXE4 195 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 VPREB1P12018 145 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 PRR3P79522 188 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 LINC00337Q8N6G1 96 aa10.59□□□□□ -0.71
PRPF40A-204ENST00000450303 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
PRPF40A-204ENST00000450303 MT1HL1P0DM35 61 aa10.57□□□□□ -0.72
PRPF40A-204ENST00000450303 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
PRPF40A-204ENST00000450303 M0R378 163 aa10.56□□□□□ -0.72
PRPF40A-204ENST00000450303 NCR3O14931 201 aa10.55□□□□□ -0.72
PRPF40A-204ENST00000450303 SNCGO76070 127 aa10.55□□□□□ -0.72
PRPF40A-204ENST00000450303 MRPL55Q7Z7F7 128 aaKnown RBP10.55□□□□□ -0.72
PRPF40A-204ENST00000450303 SMIM11BQ8TCY0 68 aa10.55□□□□□ -0.72
PRPF40A-204ENST00000450303 DNAL4O96015 105 aa10.54□□□□□ -0.72
PRPF40A-204ENST00000450303 TMEM126AQ9H061 195 aa10.54□□□□□ -0.72
PRPF40A-204ENST00000450303 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
PRPF40A-204ENST00000450303 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
PRPF40A-204ENST00000450303 UBE2BP63146 152 aa10.52□□□□□ -0.73
PRPF40A-204ENST00000450303 PHF5AQ7RTV0 110 aaKnown RBP10.52□□□□□ -0.73
PRPF40A-204ENST00000450303 Q8NDZ9 215 aa10.52□□□□□ -0.73
PRPF40A-204ENST00000450303 LINC00167Q96N53 147 aa10.51□□□□□ -0.73
PRPF40A-204ENST00000450303 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
PRPF40A-204ENST00000450303 A0A1B0GX51 115 aa10.49□□□□□ -0.73
PRPF40A-204ENST00000450303 HMCN2Q8NDA2 5059 aa10.49□□□□□ -0.73
PRPF40A-204ENST00000450303 BAALC-AS2P0C853 105 aa10.48□□□□□ -0.73
PRPF40A-204ENST00000450303 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
PRPF40A-204ENST00000450303 PSORS1C2Q9UIG4 136 aa10.47□□□□□ -0.73
PRPF40A-204ENST00000450303 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.73
PRPF40A-204ENST00000450303 RPL37AP8A6NKH3 93 aa10.46□□□□□ -0.73
PRPF40A-204ENST00000450303 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
PRPF40A-204ENST00000450303 IGLV6-57P01721 117 aa10.45□□□□□ -0.74
PRPF40A-204ENST00000450303 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
PRPF40A-204ENST00000450303 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
PRPF40A-204ENST00000450303 PRYO14603 147 aa10.43□□□□□ -0.74
PRPF40A-204ENST00000450303 C1orf137Q5JT78 98 aa10.43□□□□□ -0.74
PRPF40A-204ENST00000450303 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
PRPF40A-204ENST00000450303 KRTAP11-1Q8IUC1 163 aa10.43□□□□□ -0.74
PRPF40A-204ENST00000450303 KCNQ1DNQ9H478 68 aa10.42□□□□□ -0.74
PRPF40A-204ENST00000450303 TNXBP22105 4242 aa10.41□□□□□ -0.74
PRPF40A-204ENST00000450303 TRAV23DV6A0A075B6W5 121 aa10.41□□□□□ -0.74
PRPF40A-204ENST00000450303 SCGB1A1P11684 91 aa10.41□□□□□ -0.74
PRPF40A-204ENST00000450303 PCP4P48539 62 aa10.41□□□□□ -0.74
PRPF40A-204ENST00000450303 ORMDL1Q9P0S3 153 aa10.41□□□□□ -0.74
PRPF40A-204ENST00000450303 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
PRPF40A-204ENST00000450303 ACYP1P07311 99 aa10.4□□□□□ -0.74
PRPF40A-204ENST00000450303 KRTAP10-8P60410 259 aa10.39□□□□□ -0.75
PRPF40A-204ENST00000450303 H3BQ85 93 aa10.38□□□□□ -0.75
PRPF40A-204ENST00000450303 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
PRPF40A-204ENST00000450303 C6orf99Q4VX62 202 aa10.37□□□□□ -0.75
PRPF40A-204ENST00000450303 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
PRPF40A-204ENST00000450303 ETDCA0A1B0GVM5 59 aa10.36□□□□□ -0.75
PRPF40A-204ENST00000450303 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms