RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
GTF3C3-206ENST00000448539 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
GTF3C3-206ENST00000448539 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
GTF3C3-206ENST00000448539 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
GTF3C3-206ENST00000448539 LINC00518Q8N0U6 118 aa8.44□□□□□ -1.06
GTF3C3-206ENST00000448539 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
GTF3C3-206ENST00000448539 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
GTF3C3-206ENST00000448539 SPRR1AP35321 89 aa8.43□□□□□ -1.06
GTF3C3-206ENST00000448539 VAMP8Q9BV40 100 aa8.43□□□□□ -1.06
GTF3C3-206ENST00000448539 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
GTF3C3-206ENST00000448539 TRAV23DV6A0A075B6W5 121 aa8.42□□□□□ -1.06
GTF3C3-206ENST00000448539 MUSTN1Q8IVN3 82 aa8.42□□□□□ -1.06
GTF3C3-206ENST00000448539 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
GTF3C3-206ENST00000448539 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
GTF3C3-206ENST00000448539 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
GTF3C3-206ENST00000448539 COX8AP10176 69 aa8.41□□□□□ -1.06
GTF3C3-206ENST00000448539 HINT1P49773 126 aaPredicted RBP8.41□□□□□ -1.06
GTF3C3-206ENST00000448539 SPATA45Q537H7 98 aa8.41□□□□□ -1.06
GTF3C3-206ENST00000448539 PRR26Q8N8Z3 221 aa8.41□□□□□ -1.06
GTF3C3-206ENST00000448539 RPL13AP40429 203 aaKnown RBP8.4□□□□□ -1.06
GTF3C3-206ENST00000448539 KRTAP10-8P60410 259 aa8.4□□□□□ -1.06
GTF3C3-206ENST00000448539 ZNF73O43830 326 aaPredicted RBP8.39□□□□□ -1.07
GTF3C3-206ENST00000448539 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-206ENST00000448539 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
GTF3C3-206ENST00000448539 A6NDN8 102 aa8.37□□□□□ -1.07
GTF3C3-206ENST00000448539 B5MCH6 92 aa8.37□□□□□ -1.07
GTF3C3-206ENST00000448539 DLEU1O43261 78 aa8.37□□□□□ -1.07
GTF3C3-206ENST00000448539 CRYGAP11844 174 aa8.37□□□□□ -1.07
GTF3C3-206ENST00000448539 C14orf144Q96I85 54 aa8.37□□□□□ -1.07
GTF3C3-206ENST00000448539 SMCR5Q8TEV8 140 aa8.36□□□□□ -1.07
GTF3C3-206ENST00000448539 HIST1H4GQ99525 98 aa8.36□□□□□ -1.07
GTF3C3-206ENST00000448539 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 SLC25A34Q6PIV7 304 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 Q6ZRX8 168 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
GTF3C3-206ENST00000448539 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
GTF3C3-206ENST00000448539 TNXBP22105 4242 aa8.33□□□□□ -1.08
GTF3C3-206ENST00000448539 A0A087X002 238 aa8.32□□□□□ -1.08
GTF3C3-206ENST00000448539 A4D1N5 150 aa8.32□□□□□ -1.08
GTF3C3-206ENST00000448539 C6orf99Q4VX62 202 aa8.32□□□□□ -1.08
GTF3C3-206ENST00000448539 TYMSOSQ8TAI1 123 aa8.32□□□□□ -1.08
GTF3C3-206ENST00000448539 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
GTF3C3-206ENST00000448539 Q9BRP9 147 aa8.31□□□□□ -1.08
GTF3C3-206ENST00000448539 HIGD1BQ9P298 99 aa8.31□□□□□ -1.08
GTF3C3-206ENST00000448539 COX7BP24311 80 aa8.3□□□□□ -1.08
GTF3C3-206ENST00000448539 ERC2-IT1O76042 136 aa8.29□□□□□ -1.08
GTF3C3-206ENST00000448539 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
GTF3C3-206ENST00000448539 ELOF1P60002 83 aaKnown RBP8.28□□□□□ -1.08
GTF3C3-206ENST00000448539 GAGE2AQ6NT46 116 aa8.28□□□□□ -1.08
GTF3C3-206ENST00000448539 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
GTF3C3-206ENST00000448539 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
GTF3C3-206ENST00000448539 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
GTF3C3-206ENST00000448539 C12orf57Q99622 126 aa8.27□□□□□ -1.09
GTF3C3-206ENST00000448539 TAL2Q16559 108 aa8.26□□□□□ -1.09
GTF3C3-206ENST00000448539 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
GTF3C3-206ENST00000448539 SMIM11BQ8TCY0 68 aa8.26□□□□□ -1.09
GTF3C3-206ENST00000448539 VAMP3Q15836 100 aa8.25□□□□□ -1.09
GTF3C3-206ENST00000448539 LINC00483Q53H64 154 aa8.25□□□□□ -1.09
GTF3C3-206ENST00000448539 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
GTF3C3-206ENST00000448539 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
GTF3C3-206ENST00000448539 CEND1Q8N111 149 aa8.23□□□□□ -1.09
GTF3C3-206ENST00000448539 C3orf22Q8N5N4 141 aa8.23□□□□□ -1.09
GTF3C3-206ENST00000448539 LINC00304Q8N9R0 145 aa8.22□□□□□ -1.09
GTF3C3-206ENST00000448539 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
GTF3C3-206ENST00000448539 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
GTF3C3-206ENST00000448539 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
GTF3C3-206ENST00000448539 SLC25A20O43772 301 aa8.21□□□□□ -1.1
GTF3C3-206ENST00000448539 TSPAN13O95857 204 aa8.21□□□□□ -1.1
GTF3C3-206ENST00000448539 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
GTF3C3-206ENST00000448539 CFC1P0CG37 223 aa8.21□□□□□ -1.1
GTF3C3-206ENST00000448539 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
GTF3C3-206ENST00000448539 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
GTF3C3-206ENST00000448539 H7C2G1 150 aa8.2□□□□□ -1.1
GTF3C3-206ENST00000448539 HSD52Q0P140 79 aa8.2□□□□□ -1.1
GTF3C3-206ENST00000448539 LRP2P98164 4655 aa8.18□□□□□ -1.1
GTF3C3-206ENST00000448539 DEFB105AQ8NG35 78 aa8.18□□□□□ -1.1
GTF3C3-206ENST00000448539 MOBPQ13875 183 aa8.17□□□□□ -1.1
GTF3C3-206ENST00000448539 Q1RN00 199 aa8.17□□□□□ -1.1
GTF3C3-206ENST00000448539 BVES-AS1Q5T3Y7 98 aa8.17□□□□□ -1.1
GTF3C3-206ENST00000448539 C9orf153Q5TBE3 101 aa8.17□□□□□ -1.1
GTF3C3-206ENST00000448539 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
GTF3C3-206ENST00000448539 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 SPRR1BP22528 89 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 FXYD2P54710 66 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 Q8NBF4 154 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 LAMTOR3Q9UHA4 124 aa8.16□□□□□ -1.1
GTF3C3-206ENST00000448539 TEX49A0A1B0GTD5 131 aa8.15□□□□□ -1.1
GTF3C3-206ENST00000448539 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
GTF3C3-206ENST00000448539 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
GTF3C3-206ENST00000448539 hADV29S1A0JD25 119 aa8.14□□□□□ -1.11
GTF3C3-206ENST00000448539 CTAG1AP78358 180 aa8.14□□□□□ -1.11
GTF3C3-206ENST00000448539 SNCGO76070 127 aa8.13□□□□□ -1.11
GTF3C3-206ENST00000448539 PRO1933Q9H354 126 aa8.13□□□□□ -1.11
GTF3C3-206ENST00000448539 PRR4Q16378 134 aa8.12□□□□□ -1.11
GTF3C3-206ENST00000448539 IGLV5-48A0A075B6I7 105 aa8.11□□□□□ -1.11
GTF3C3-206ENST00000448539 H0YGX0 51 aa8.11□□□□□ -1.11
GTF3C3-206ENST00000448539 GHRHP01286 108 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms