RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 TYMSOSQ8TAI1 123 aa12.29□□□□□ -0.44
GARNL3-209ENST00000446764 KRTAP13-2Q52LG2 175 aa12.28□□□□□ -0.44
GARNL3-209ENST00000446764 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
GARNL3-209ENST00000446764 TRAV23DV6A0A075B6W5 121 aa12.27□□□□□ -0.45
GARNL3-209ENST00000446764 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
GARNL3-209ENST00000446764 HSBP1L1C9JCN9 74 aa12.25□□□□□ -0.45
GARNL3-209ENST00000446764 ZNF73O43830 326 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-209ENST00000446764 Q6ZRX8 168 aa12.23□□□□□ -0.45
GARNL3-209ENST00000446764 OR13C6PQ8NH95 151 aa12.23□□□□□ -0.45
GARNL3-209ENST00000446764 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-209ENST00000446764 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
GARNL3-209ENST00000446764 IFITM1P13164 125 aa12.22□□□□□ -0.45
GARNL3-209ENST00000446764 Q6ZVH6 145 aa12.22□□□□□ -0.45
GARNL3-209ENST00000446764 LINC00518Q8N0U6 118 aa12.22□□□□□ -0.45
GARNL3-209ENST00000446764 COPS9Q8WXC6 57 aa12.21□□□□□ -0.45
GARNL3-209ENST00000446764 Q9BRP9 147 aa12.21□□□□□ -0.45
GARNL3-209ENST00000446764 PPDPFQ9H3Y8 114 aa12.21□□□□□ -0.45
GARNL3-209ENST00000446764 CBY1Q9Y3M2 126 aa12.21□□□□□ -0.45
GARNL3-209ENST00000446764 ERC2-IT1O76042 136 aa12.2□□□□□ -0.46
GARNL3-209ENST00000446764 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
GARNL3-209ENST00000446764 C3orf22Q8N5N4 141 aa12.18□□□□□ -0.46
GARNL3-209ENST00000446764 TSPAN13O95857 204 aa12.17□□□□□ -0.46
GARNL3-209ENST00000446764 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-209ENST00000446764 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-209ENST00000446764 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
GARNL3-209ENST00000446764 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
GARNL3-209ENST00000446764 LINC00304Q8N9R0 145 aa12.14□□□□□ -0.47
GARNL3-209ENST00000446764 UBR4Q5T4S7 5183 aa12.12□□□□□ -0.47
GARNL3-209ENST00000446764 C6orf99Q4VX62 202 aa12.11□□□□□ -0.47
GARNL3-209ENST00000446764 A6NDN8 102 aa12.1□□□□□ -0.47
GARNL3-209ENST00000446764 COX8AP10176 69 aa12.09□□□□□ -0.47
GARNL3-209ENST00000446764 LRP2P98164 4655 aa12.09□□□□□ -0.47
GARNL3-209ENST00000446764 COX7BP24311 80 aa12.07□□□□□ -0.48
GARNL3-209ENST00000446764 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
GARNL3-209ENST00000446764 PRR4Q16378 134 aa12.07□□□□□ -0.48
GARNL3-209ENST00000446764 ST20-AS1Q8NBB2 130 aa12.07□□□□□ -0.48
GARNL3-209ENST00000446764 TRAV13-2A0A0B4J235 113 aa12.06□□□□□ -0.48
GARNL3-209ENST00000446764 DHRS4-AS1Q9P1J3 65 aa12.06□□□□□ -0.48
GARNL3-209ENST00000446764 DLEU1O43261 78 aa12.05□□□□□ -0.48
GARNL3-209ENST00000446764 CTAG1AP78358 180 aa12.04□□□□□ -0.48
GARNL3-209ENST00000446764 PAM16Q9Y3D7 125 aa12.04□□□□□ -0.48
GARNL3-209ENST00000446764 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 A4D1N5 150 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 SPATA45Q537H7 98 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 Q8NBF4 154 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 C14orf144Q96I85 54 aa12.03□□□□□ -0.48
GARNL3-209ENST00000446764 IGLV9-49A0A0B4J1Y8 123 aa12.02□□□□□ -0.49
GARNL3-209ENST00000446764 MOBPQ13875 183 aa12.01□□□□□ -0.49
GARNL3-209ENST00000446764 SMIM11BQ8TCY0 68 aa12.01□□□□□ -0.49
GARNL3-209ENST00000446764 VAMP8Q9BV40 100 aa12.01□□□□□ -0.49
GARNL3-209ENST00000446764 LPAP08519 4548 aa12.01□□□□□ -0.49
GARNL3-209ENST00000446764 A0A1B0GWB2 263 aa12□□□□□ -0.49
GARNL3-209ENST00000446764 HIST1H4GQ99525 98 aa12□□□□□ -0.49
GARNL3-209ENST00000446764 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
GARNL3-209ENST00000446764 SSBP3-AS1Q7Z2R9 100 aa11.99□□□□□ -0.49
GARNL3-209ENST00000446764 TMA7Q9Y2S6 64 aaKnown RBP11.99□□□□□ -0.49
GARNL3-209ENST00000446764 SPRR1BP22528 89 aa11.98□□□□□ -0.49
GARNL3-209ENST00000446764 RETNLBQ9BQ08 111 aa11.98□□□□□ -0.49
GARNL3-209ENST00000446764 SLC25A34Q6PIV7 304 aa11.95□□□□□ -0.5
GARNL3-209ENST00000446764 PYY3Q5JQD4 70 aa11.94□□□□□ -0.5
GARNL3-209ENST00000446764 C12orf57Q99622 126 aa11.94□□□□□ -0.5
GARNL3-209ENST00000446764 HIGD1BQ9P298 99 aa11.94□□□□□ -0.5
GARNL3-209ENST00000446764 C9orf153Q5TBE3 101 aa11.93□□□□□ -0.5
GARNL3-209ENST00000446764 SPINK1P00995 79 aa11.92□□□□□ -0.5
GARNL3-209ENST00000446764 TAL2Q16559 108 aa11.92□□□□□ -0.5
GARNL3-209ENST00000446764 C2orf91Q6ZV80 131 aa11.92□□□□□ -0.5
GARNL3-209ENST00000446764 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
GARNL3-209ENST00000446764 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
GARNL3-209ENST00000446764 VAMP3Q15836 100 aa11.89□□□□□ -0.51
GARNL3-209ENST00000446764 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
GARNL3-209ENST00000446764 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
GARNL3-209ENST00000446764 NHP2Q9NX24 153 aaKnown RBP11.88□□□□□ -0.51
GARNL3-209ENST00000446764 IGLV5-48A0A075B6I7 105 aa11.86□□□□□ -0.51
GARNL3-209ENST00000446764 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
GARNL3-209ENST00000446764 CFC1P0CG37 223 aa11.86□□□□□ -0.51
GARNL3-209ENST00000446764 IGLV7-46A0A075B6I9 117 aa11.85□□□□□ -0.51
GARNL3-209ENST00000446764 RPS29P62273 56 aaKnown RBP11.85□□□□□ -0.51
GARNL3-209ENST00000446764 Q1RN00 199 aa11.85□□□□□ -0.51
GARNL3-209ENST00000446764 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
GARNL3-209ENST00000446764 SLC25A20O43772 301 aa11.84□□□□□ -0.51
GARNL3-209ENST00000446764 SMIM29Q86T20 159 aa11.84□□□□□ -0.51
GARNL3-209ENST00000446764 CEND1Q8N111 149 aa11.82□□□□□ -0.52
GARNL3-209ENST00000446764 RAB37Q96AX2 223 aa11.82□□□□□ -0.52
GARNL3-209ENST00000446764 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
GARNL3-209ENST00000446764 Q8N377 158 aa11.81□□□□□ -0.52
GARNL3-209ENST00000446764 hADV29S1A0JD25 119 aa11.8□□□□□ -0.52
GARNL3-209ENST00000446764 H7C2G1 150 aa11.8□□□□□ -0.52
GARNL3-209ENST00000446764 FP248Q71RG6 208 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-209ENST00000446764 TPRXLQ17RH7 258 aa11.79□□□□□ -0.52
GARNL3-209ENST00000446764 BVES-AS1Q5T3Y7 98 aa11.79□□□□□ -0.52
GARNL3-209ENST00000446764 RNF213Q63HN8 5207 aa11.79□□□□□ -0.52
GARNL3-209ENST00000446764 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
GARNL3-209ENST00000446764 FXYD2P54710 66 aa11.76□□□□□ -0.53
GARNL3-209ENST00000446764 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
GARNL3-209ENST00000446764 Q6ZQY7 126 aa11.76□□□□□ -0.53
GARNL3-209ENST00000446764 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
GARNL3-209ENST00000446764 A6NJY4 79 aa11.75□□□□□ -0.53
GARNL3-209ENST00000446764 HSD52Q0P140 79 aa11.72□□□□□ -0.53
GARNL3-209ENST00000446764 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms