RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 MIR7-3HGQ8N6C7 128 aa6.57□□□□□ -1.36
CDCA3-203ENST00000446553 LINC00337Q8N6G1 96 aa6.57□□□□□ -1.36
CDCA3-203ENST00000446553 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
CDCA3-203ENST00000446553 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
CDCA3-203ENST00000446553 PRO1933Q9H354 126 aa6.56□□□□□ -1.36
CDCA3-203ENST00000446553 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
CDCA3-203ENST00000446553 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
CDCA3-203ENST00000446553 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
CDCA3-203ENST00000446553 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
CDCA3-203ENST00000446553 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
CDCA3-203ENST00000446553 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
CDCA3-203ENST00000446553 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
CDCA3-203ENST00000446553 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
CDCA3-203ENST00000446553 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
CDCA3-203ENST00000446553 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
CDCA3-203ENST00000446553 TIMM17BO60830 172 aa6.53□□□□□ -1.36
CDCA3-203ENST00000446553 DDTP30046 118 aa6.52□□□□□ -1.37
CDCA3-203ENST00000446553 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 NCR3O14931 201 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 NDUFC2O95298 119 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 Q6ZVH6 145 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 C3orf22Q8N5N4 141 aa6.51□□□□□ -1.37
CDCA3-203ENST00000446553 SPANXB1Q9NS25 103 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-203ENST00000446553 TAL2Q16559 108 aa6.49□□□□□ -1.37
CDCA3-203ENST00000446553 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
CDCA3-203ENST00000446553 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
CDCA3-203ENST00000446553 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
CDCA3-203ENST00000446553 LITAFQ99732 161 aa6.49□□□□□ -1.37
CDCA3-203ENST00000446553 A0A0U1RQV1 116 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 B5MCH6 92 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 IFITM1P13164 125 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 HSD52Q0P140 79 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 HIST1H4GQ99525 98 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
CDCA3-203ENST00000446553 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
CDCA3-203ENST00000446553 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
CDCA3-203ENST00000446553 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
CDCA3-203ENST00000446553 FP248Q71RG6 208 aaPredicted RBP6.47□□□□□ -1.37
CDCA3-203ENST00000446553 DAND5Q8N907 189 aa6.47□□□□□ -1.37
CDCA3-203ENST00000446553 MUC17Q685J3 4493 aa6.46□□□□□ -1.37
CDCA3-203ENST00000446553 PCP4L1A6NKN8 68 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 M0R143 59 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 Q6ZRX8 168 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 RETNLBQ9BQ08 111 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 CBY1Q9Y3M2 126 aa6.46□□□□□ -1.38
CDCA3-203ENST00000446553 SPINK1P00995 79 aa6.45□□□□□ -1.38
CDCA3-203ENST00000446553 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
CDCA3-203ENST00000446553 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 CEND1Q8N111 149 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 Q8NBF4 154 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
CDCA3-203ENST00000446553 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
CDCA3-203ENST00000446553 A6NJY4 79 aa6.43□□□□□ -1.38
CDCA3-203ENST00000446553 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
CDCA3-203ENST00000446553 Q9BRP9 147 aa6.43□□□□□ -1.38
CDCA3-203ENST00000446553 TRAV23DV6A0A075B6W5 121 aa6.42□□□□□ -1.38
CDCA3-203ENST00000446553 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
CDCA3-203ENST00000446553 BVES-AS1Q5T3Y7 98 aa6.42□□□□□ -1.38
CDCA3-203ENST00000446553 GAGE2AQ6NT46 116 aa6.42□□□□□ -1.38
CDCA3-203ENST00000446553 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
CDCA3-203ENST00000446553 ZNF73O43830 326 aaPredicted RBP6.41□□□□□ -1.38
CDCA3-203ENST00000446553 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
CDCA3-203ENST00000446553 HINT1P49773 126 aaPredicted RBP6.4□□□□□ -1.38
CDCA3-203ENST00000446553 A4D1N5 150 aa6.39□□□□□ -1.39
CDCA3-203ENST00000446553 A6NDN8 102 aa6.39□□□□□ -1.39
CDCA3-203ENST00000446553 FXYD2P54710 66 aa6.39□□□□□ -1.39
CDCA3-203ENST00000446553 NPC2P61916 151 aa6.38□□□□□ -1.39
CDCA3-203ENST00000446553 MOBPQ13875 183 aa6.38□□□□□ -1.39
CDCA3-203ENST00000446553 A0A1B0GWB2 263 aa6.37□□□□□ -1.39
CDCA3-203ENST00000446553 BATFQ16520 125 aa6.37□□□□□ -1.39
CDCA3-203ENST00000446553 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
CDCA3-203ENST00000446553 SNHG12Q9BXW3 62 aa6.37□□□□□ -1.39
CDCA3-203ENST00000446553 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 SLC25A20O43772 301 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 CFC1BP0CG36 223 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 CFC1P0CG37 223 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 SPRR1BP22528 89 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 Q8N377 158 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 DHRS4-AS1Q9P1J3 65 aa6.36□□□□□ -1.39
CDCA3-203ENST00000446553 COL5A1-AS1Q5SY13 56 aa6.35□□□□□ -1.39
CDCA3-203ENST00000446553 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
CDCA3-203ENST00000446553 NHP2Q9NX24 153 aaKnown RBP6.35□□□□□ -1.39
CDCA3-203ENST00000446553 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
CDCA3-203ENST00000446553 PRO1854Q9UHT4 67 aa6.34□□□□□ -1.39
CDCA3-203ENST00000446553 TRBV7-6A0A0J9YX20 115 aa6.33□□□□□ -1.4
CDCA3-203ENST00000446553 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
CDCA3-203ENST00000446553 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
CDCA3-203ENST00000446553 K7ERJ3 54 aa6.32□□□□□ -1.4
CDCA3-203ENST00000446553 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms