RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ANAPC11Q9NYG5 84 aa14.25□□□□□ -0.13
C9orf3-207ENST00000445181 KRTAP4-16G5E9R7 235 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-207ENST00000445181 CRYGAP11844 174 aa14.24□□□□□ -0.13
C9orf3-207ENST00000445181 IFITM1P13164 125 aa14.24□□□□□ -0.13
C9orf3-207ENST00000445181 CBY1Q9Y3M2 126 aa14.24□□□□□ -0.13
C9orf3-207ENST00000445181 LINC00518Q8N0U6 118 aa14.23□□□□□ -0.13
C9orf3-207ENST00000445181 UBR4Q5T4S7 5183 aa14.23□□□□□ -0.13
C9orf3-207ENST00000445181 A0A087X002 238 aa14.21□□□□□ -0.13
C9orf3-207ENST00000445181 B5MCH6 92 aa14.21□□□□□ -0.13
C9orf3-207ENST00000445181 ZNF73O43830 326 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-207ENST00000445181 MUSTN1Q8IVN3 82 aa14.2□□□□□ -0.14
C9orf3-207ENST00000445181 FAM229BQ4G0N7 80 aa14.19□□□□□ -0.14
C9orf3-207ENST00000445181 SMCR5Q8TEV8 140 aa14.19□□□□□ -0.14
C9orf3-207ENST00000445181 TMA7Q9Y2S6 64 aaKnown RBP14.19□□□□□ -0.14
C9orf3-207ENST00000445181 ZNF706Q9Y5V0 76 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-207ENST00000445181 HINT1P49773 126 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-207ENST00000445181 TYMSOSQ8TAI1 123 aa14.17□□□□□ -0.14
C9orf3-207ENST00000445181 PPDPFQ9H3Y8 114 aa14.17□□□□□ -0.14
C9orf3-207ENST00000445181 Q6ZRX8 168 aa14.16□□□□□ -0.14
C9orf3-207ENST00000445181 JOSD1Q15040 202 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-207ENST00000445181 SPRR4Q96PI1 79 aa14.15□□□□□ -0.14
C9orf3-207ENST00000445181 A6NDN8 102 aa14.12□□□□□ -0.15
C9orf3-207ENST00000445181 COX8AP10176 69 aa14.12□□□□□ -0.15
C9orf3-207ENST00000445181 VAMP8Q9BV40 100 aa14.12□□□□□ -0.15
C9orf3-207ENST00000445181 PAM16Q9Y3D7 125 aa14.12□□□□□ -0.15
C9orf3-207ENST00000445181 KRTAP13-2Q52LG2 175 aa14.11□□□□□ -0.15
C9orf3-207ENST00000445181 SPATA45Q537H7 98 aa14.11□□□□□ -0.15
C9orf3-207ENST00000445181 Q9BRP9 147 aa14.11□□□□□ -0.15
C9orf3-207ENST00000445181 ERC2-IT1O76042 136 aa14.08□□□□□ -0.16
C9orf3-207ENST00000445181 C14orf144Q96I85 54 aa14.08□□□□□ -0.16
C9orf3-207ENST00000445181 LRP2P98164 4655 aa14.07□□□□□ -0.16
C9orf3-207ENST00000445181 TRAV13-2A0A0B4J235 113 aa14.06□□□□□ -0.16
C9orf3-207ENST00000445181 DLEU1O43261 78 aa14.06□□□□□ -0.16
C9orf3-207ENST00000445181 C6orf99Q4VX62 202 aa14.06□□□□□ -0.16
C9orf3-207ENST00000445181 GAGE2AQ6NT46 116 aa14.06□□□□□ -0.16
C9orf3-207ENST00000445181 HIST1H4GQ99525 98 aa14.06□□□□□ -0.16
C9orf3-207ENST00000445181 COX7BP24311 80 aa14.03□□□□□ -0.16
C9orf3-207ENST00000445181 C3orf22Q8N5N4 141 aa14.03□□□□□ -0.16
C9orf3-207ENST00000445181 A4D1N5 150 aa14.02□□□□□ -0.17
C9orf3-207ENST00000445181 TSPAN13O95857 204 aa14.02□□□□□ -0.17
C9orf3-207ENST00000445181 DHRS4-AS1Q9P1J3 65 aa14.02□□□□□ -0.17
C9orf3-207ENST00000445181 LINC00483Q53H64 154 aa14.01□□□□□ -0.17
C9orf3-207ENST00000445181 SLC25A34Q6PIV7 304 aa14.01□□□□□ -0.17
C9orf3-207ENST00000445181 ELOF1P60002 83 aaKnown RBP14□□□□□ -0.17
C9orf3-207ENST00000445181 LINC00304Q8N9R0 145 aa14□□□□□ -0.17
C9orf3-207ENST00000445181 PYY3Q5JQD4 70 aa13.99□□□□□ -0.17
C9orf3-207ENST00000445181 TRBV7-6A0A0J9YX20 115 aa13.97□□□□□ -0.17
C9orf3-207ENST00000445181 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
C9orf3-207ENST00000445181 SMIM11BQ8TCY0 68 aa13.96□□□□□ -0.17
C9orf3-207ENST00000445181 A0A1B0GWB2 263 aa13.95□□□□□ -0.18
C9orf3-207ENST00000445181 C12orf57Q99622 126 aa13.95□□□□□ -0.18
C9orf3-207ENST00000445181 HIGD1BQ9P298 99 aa13.95□□□□□ -0.18
C9orf3-207ENST00000445181 IGLV9-49A0A0B4J1Y8 123 aa13.94□□□□□ -0.18
C9orf3-207ENST00000445181 C2orf91Q6ZV80 131 aa13.91□□□□□ -0.18
C9orf3-207ENST00000445181 MOBPQ13875 183 aa13.9□□□□□ -0.18
C9orf3-207ENST00000445181 C4orf48Q5BLP8 95 aa13.9□□□□□ -0.18
C9orf3-207ENST00000445181 VAMP3Q15836 100 aa13.89□□□□□ -0.19
C9orf3-207ENST00000445181 PRR4Q16378 134 aa13.89□□□□□ -0.19
C9orf3-207ENST00000445181 Q8NBF4 154 aa13.89□□□□□ -0.19
C9orf3-207ENST00000445181 SPAG11AQ6PDA7 123 aa13.87□□□□□ -0.19
C9orf3-207ENST00000445181 TAL2Q16559 108 aa13.86□□□□□ -0.19
C9orf3-207ENST00000445181 C9orf153Q5TBE3 101 aa13.86□□□□□ -0.19
C9orf3-207ENST00000445181 NHP2Q9NX24 153 aaKnown RBP13.86□□□□□ -0.19
C9orf3-207ENST00000445181 DEFB105AQ8NG35 78 aa13.85□□□□□ -0.19
C9orf3-207ENST00000445181 RAB37Q96AX2 223 aa13.85□□□□□ -0.19
C9orf3-207ENST00000445181 SLC25A20O43772 301 aa13.83□□□□□ -0.2
C9orf3-207ENST00000445181 SSBP3-AS1Q7Z2R9 100 aa13.83□□□□□ -0.2
C9orf3-207ENST00000445181 LPAP08519 4548 aa13.83□□□□□ -0.2
C9orf3-207ENST00000445181 CFC1BP0CG36 223 aa13.82□□□□□ -0.2
C9orf3-207ENST00000445181 CFC1P0CG37 223 aa13.82□□□□□ -0.2
C9orf3-207ENST00000445181 SPRR1BP22528 89 aa13.82□□□□□ -0.2
C9orf3-207ENST00000445181 CTAG1AP78358 180 aa13.82□□□□□ -0.2
C9orf3-207ENST00000445181 CEND1Q8N111 149 aa13.82□□□□□ -0.2
C9orf3-207ENST00000445181 H7C2G1 150 aa13.81□□□□□ -0.2
C9orf3-207ENST00000445181 LAMTOR3Q9UHA4 124 aa13.81□□□□□ -0.2
C9orf3-207ENST00000445181 RNF213Q63HN8 5207 aa13.8□□□□□ -0.2
C9orf3-207ENST00000445181 TEX49A0A1B0GTD5 131 aa13.79□□□□□ -0.2
C9orf3-207ENST00000445181 TMEM238LA0A1B0GVL6 79 aa13.79□□□□□ -0.2
C9orf3-207ENST00000445181 A6NJY4 79 aa13.79□□□□□ -0.2
C9orf3-207ENST00000445181 RETNLBQ9BQ08 111 aa13.79□□□□□ -0.2
C9orf3-207ENST00000445181 A0A0B4J2C4 111 aa13.78□□□□□ -0.2
C9orf3-207ENST00000445181 BVES-AS1Q5T3Y7 98 aa13.77□□□□□ -0.21
C9orf3-207ENST00000445181 SPINK1P00995 79 aa13.76□□□□□ -0.21
C9orf3-207ENST00000445181 Q1RN00 199 aa13.76□□□□□ -0.21
C9orf3-207ENST00000445181 LINC00575Q6W349 94 aa13.76□□□□□ -0.21
C9orf3-207ENST00000445181 UQCR10Q9UDW1 63 aa13.76□□□□□ -0.21
C9orf3-207ENST00000445181 hADV29S1A0JD25 119 aa13.74□□□□□ -0.21
C9orf3-207ENST00000445181 IGLV5-48A0A075B6I7 105 aa13.73□□□□□ -0.21
C9orf3-207ENST00000445181 FXYD2P54710 66 aa13.73□□□□□ -0.21
C9orf3-207ENST00000445181 HSD52Q0P140 79 aa13.73□□□□□ -0.21
C9orf3-207ENST00000445181 LINC01547P58512 204 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-207ENST00000445181 PRO1854Q9UHT4 67 aa13.7□□□□□ -0.22
C9orf3-207ENST00000445181 Q6ZQY7 126 aa13.68□□□□□ -0.22
C9orf3-207ENST00000445181 Q8N377 158 aa13.67□□□□□ -0.22
C9orf3-207ENST00000445181 SMIM29Q86T20 159 aa13.66□□□□□ -0.22
C9orf3-207ENST00000445181 RPS29P62273 56 aaKnown RBP13.64□□□□□ -0.23
C9orf3-207ENST00000445181 PRO1933Q9H354 126 aa13.64□□□□□ -0.23
C9orf3-207ENST00000445181 IGLV7-46A0A075B6I9 117 aa13.63□□□□□ -0.23
C9orf3-207ENST00000445181 H0YGX0 51 aa13.63□□□□□ -0.23
C9orf3-207ENST00000445181 SNCGO76070 127 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms