RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 MRPS36P82909 103 aaKnown RBP5.12□□□□□ -1.59
HDAC8-215ENST00000444609 SPATA45Q537H7 98 aa5.12□□□□□ -1.59
HDAC8-215ENST00000444609 FAM104BQ5XKR9 115 aa5.12□□□□□ -1.59
HDAC8-215ENST00000444609 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
HDAC8-215ENST00000444609 UQCR10Q9UDW1 63 aa5.12□□□□□ -1.59
HDAC8-215ENST00000444609 PAM16Q9Y3D7 125 aa5.12□□□□□ -1.59
HDAC8-215ENST00000444609 F8VRH5 84 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 FA2HQ7L5A8 372 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 Q8IZM0 81 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 ORMDL3Q8N138 153 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 TMEM191AQ9H0A3 160 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 LAMTOR2Q9Y2Q5 125 aa5.11□□□□□ -1.59
HDAC8-215ENST00000444609 SYS1-DBNDD2H3BUS1 97 aa5.1□□□□□ -1.59
HDAC8-215ENST00000444609 VPS25Q9BRG1 176 aa5.1□□□□□ -1.59
HDAC8-215ENST00000444609 SNHG12Q9BXW3 62 aa5.1□□□□□ -1.59
HDAC8-215ENST00000444609 NPSP0C0P6 89 aa5.09□□□□□ -1.59
HDAC8-215ENST00000444609 IGLC3P0DOY3 106 aa5.09□□□□□ -1.59
HDAC8-215ENST00000444609 RPL39P62891 51 aaKnown RBP5.09□□□□□ -1.59
HDAC8-215ENST00000444609 MRPL51Q4U2R6 128 aaKnown RBP5.09□□□□□ -1.59
HDAC8-215ENST00000444609 PRELID3AQ96N28 172 aa5.09□□□□□ -1.59
HDAC8-215ENST00000444609 SPANXA1Q9NS26 97 aa5.09□□□□□ -1.59
HDAC8-215ENST00000444609 LINC01546A6NGU7 62 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 D6R8Y8 96 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 K7ERU9 68 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 CKS2P33552 79 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 Q6ZN92 141 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 AMN1Q8IY45 258 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 NRACQ8N912 160 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
HDAC8-215ENST00000444609 IFI27P40305 119 aaPredicted RBP5.07□□□□□ -1.6
HDAC8-215ENST00000444609 VAMP3Q15836 100 aa5.07□□□□□ -1.6
HDAC8-215ENST00000444609 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
HDAC8-215ENST00000444609 LINC01545Q5VT33 79 aa5.07□□□□□ -1.6
HDAC8-215ENST00000444609 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
HDAC8-215ENST00000444609 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
HDAC8-215ENST00000444609 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
HDAC8-215ENST00000444609 HBDP02042 147 aa5.06□□□□□ -1.6
HDAC8-215ENST00000444609 COL5A1-AS1Q5SY13 56 aa5.06□□□□□ -1.6
HDAC8-215ENST00000444609 TIMM17AQ99595 171 aa5.06□□□□□ -1.6
HDAC8-215ENST00000444609 NPYP01303 97 aa5.05□□□□□ -1.6
HDAC8-215ENST00000444609 VPREB1P12018 145 aa5.05□□□□□ -1.6
HDAC8-215ENST00000444609 SUMO2P61956 95 aaKnown RBP5.05□□□□□ -1.6
HDAC8-215ENST00000444609 Q8N8P6 123 aa5.05□□□□□ -1.6
HDAC8-215ENST00000444609 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
HDAC8-215ENST00000444609 LOC389332A0A1B0GUA5 103 aa5.04□□□□□ -1.6
HDAC8-215ENST00000444609 PPP1R17O96001 155 aa5.04□□□□□ -1.6
HDAC8-215ENST00000444609 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
HDAC8-215ENST00000444609 IFI27L1Q96BM0 104 aa5.04□□□□□ -1.6
HDAC8-215ENST00000444609 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
HDAC8-215ENST00000444609 A0A096LNJ9 63 aa5.03□□□□□ -1.6
HDAC8-215ENST00000444609 K7EMI3 77 aa5.03□□□□□ -1.6
HDAC8-215ENST00000444609 SLC25A34Q6PIV7 304 aa5.03□□□□□ -1.6
HDAC8-215ENST00000444609 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
HDAC8-215ENST00000444609 SMKR1H3BMG3 65 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 ATP5LO75964 103 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 COX8AP10176 69 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 CXCL5P42830 114 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 C20orf78Q9BR46 151 aa5.02□□□□□ -1.61
HDAC8-215ENST00000444609 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
HDAC8-215ENST00000444609 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
HDAC8-215ENST00000444609 BATFQ16520 125 aa5.01□□□□□ -1.61
HDAC8-215ENST00000444609 HERV-K104P63124 156 aa5□□□□□ -1.61
HDAC8-215ENST00000444609 RPL24P83731 157 aaKnown RBP5□□□□□ -1.61
HDAC8-215ENST00000444609 ORMDL2Q53FV1 153 aa5□□□□□ -1.61
HDAC8-215ENST00000444609 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
HDAC8-215ENST00000444609 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
HDAC8-215ENST00000444609 TRBV20-1A0A075B6N2 111 aa4.99□□□□□ -1.61
HDAC8-215ENST00000444609 HINT1P49773 126 aaPredicted RBP4.99□□□□□ -1.61
HDAC8-215ENST00000444609 OCIAD2Q56VL3 154 aa4.99□□□□□ -1.61
HDAC8-215ENST00000444609 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
HDAC8-215ENST00000444609 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
HDAC8-215ENST00000444609 TRAV12-1A0A0B4J245 112 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 IGKCP01834 107 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 BOD1L2Q8IYS8 172 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 Q8NDZ9 215 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 PYGO1Q9Y3Y4 419 aa4.98□□□□□ -1.61
HDAC8-215ENST00000444609 A6NN06 94 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 DPM2O94777 84 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 SEC11AP67812 179 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 BVES-AS1Q5T3Y7 98 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 TOMM6Q96B49 74 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 TMEM141Q96I45 108 aa4.97□□□□□ -1.61
HDAC8-215ENST00000444609 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 SPRR2EP22531 72 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 PLNP26678 52 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 SPRR1AP35321 89 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 SPRR2BP35325 72 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 SPRR2AP35326 72 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 CDKN2A-AS1Q9UH64 79 aa4.96□□□□□ -1.62
HDAC8-215ENST00000444609 A6NDN8 102 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 HSD52Q0P140 79 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 ZC2HC1BQ5TFG8 222 aa4.95□□□□□ -1.62
HDAC8-215ENST00000444609 C2orf91Q6ZV80 131 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms