RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 S100A1P23297 94 aa12.23□□□□□ -0.45
RAB5A-204ENST00000443878 JOSD1Q15040 202 aaPredicted RBP12.23□□□□□ -0.45
RAB5A-204ENST00000443878 Q6ZRX8 168 aa12.23□□□□□ -0.45
RAB5A-204ENST00000443878 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
RAB5A-204ENST00000443878 SPAG11AQ6PDA7 123 aa12.22□□□□□ -0.45
RAB5A-204ENST00000443878 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
RAB5A-204ENST00000443878 HINT1P49773 126 aaPredicted RBP12.2□□□□□ -0.46
RAB5A-204ENST00000443878 LINC00483Q53H64 154 aa12.2□□□□□ -0.46
RAB5A-204ENST00000443878 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 Q9BRP9 147 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 TTTY13Q9BZ97 58 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 PPDPFQ9H3Y8 114 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 LPAP08519 4548 aa12.18□□□□□ -0.46
RAB5A-204ENST00000443878 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
RAB5A-204ENST00000443878 GAGE2AQ6NT46 116 aa12.17□□□□□ -0.46
RAB5A-204ENST00000443878 LINC00518Q8N0U6 118 aa12.17□□□□□ -0.46
RAB5A-204ENST00000443878 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
RAB5A-204ENST00000443878 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
RAB5A-204ENST00000443878 ERC2-IT1O76042 136 aa12.15□□□□□ -0.46
RAB5A-204ENST00000443878 SNRPEP62304 92 aaKnown RBP12.15□□□□□ -0.46
RAB5A-204ENST00000443878 S100A2P29034 98 aa12.14□□□□□ -0.47
RAB5A-204ENST00000443878 ANKRD39Q53RE8 183 aa12.14□□□□□ -0.47
RAB5A-204ENST00000443878 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
RAB5A-204ENST00000443878 Q6ZVH6 145 aa12.13□□□□□ -0.47
RAB5A-204ENST00000443878 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
RAB5A-204ENST00000443878 IFITM1P13164 125 aa12.12□□□□□ -0.47
RAB5A-204ENST00000443878 Q8NBF4 154 aa12.12□□□□□ -0.47
RAB5A-204ENST00000443878 HIST3H2BBQ8N257 126 aa12.11□□□□□ -0.47
RAB5A-204ENST00000443878 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
RAB5A-204ENST00000443878 SSBP3-AS1Q7Z2R9 100 aa12.1□□□□□ -0.47
RAB5A-204ENST00000443878 RNF213Q63HN8 5207 aa12.08□□□□□ -0.48
RAB5A-204ENST00000443878 SPINK1P00995 79 aa12.08□□□□□ -0.48
RAB5A-204ENST00000443878 S100A6P06703 90 aa12.08□□□□□ -0.48
RAB5A-204ENST00000443878 HIST1H2BLQ99880 126 aa12.08□□□□□ -0.48
RAB5A-204ENST00000443878 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.48
RAB5A-204ENST00000443878 IGLV9-49A0A0B4J1Y8 123 aa12.07□□□□□ -0.48
RAB5A-204ENST00000443878 MOBPQ13875 183 aa12.07□□□□□ -0.48
RAB5A-204ENST00000443878 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
RAB5A-204ENST00000443878 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
RAB5A-204ENST00000443878 TPRXLQ17RH7 258 aa12.05□□□□□ -0.48
RAB5A-204ENST00000443878 HSBP1L1C9JCN9 74 aa12.04□□□□□ -0.48
RAB5A-204ENST00000443878 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
RAB5A-204ENST00000443878 COX7BP24311 80 aa12.03□□□□□ -0.48
RAB5A-204ENST00000443878 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
RAB5A-204ENST00000443878 RPS29P62273 56 aaKnown RBP12.02□□□□□ -0.49
RAB5A-204ENST00000443878 C6orf99Q4VX62 202 aa12.02□□□□□ -0.49
RAB5A-204ENST00000443878 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
RAB5A-204ENST00000443878 MUSTN1Q8IVN3 82 aa12.02□□□□□ -0.49
RAB5A-204ENST00000443878 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
RAB5A-204ENST00000443878 ST20-AS1Q8NBB2 130 aa12.01□□□□□ -0.49
RAB5A-204ENST00000443878 C9orf153Q5TBE3 101 aa12□□□□□ -0.49
RAB5A-204ENST00000443878 SPRR1BP22528 89 aa11.99□□□□□ -0.49
RAB5A-204ENST00000443878 TRAV13-2A0A0B4J235 113 aa11.98□□□□□ -0.49
RAB5A-204ENST00000443878 A6NDN8 102 aa11.98□□□□□ -0.49
RAB5A-204ENST00000443878 CDIP1Q9H305 208 aa11.98□□□□□ -0.49
RAB5A-204ENST00000443878 A0A1B0GWB2 263 aa11.96□□□□□ -0.49
RAB5A-204ENST00000443878 LAMTOR3Q9UHA4 124 aa11.94□□□□□ -0.5
RAB5A-204ENST00000443878 A4D1N5 150 aa11.93□□□□□ -0.5
RAB5A-204ENST00000443878 SLC25A20O43772 301 aa11.92□□□□□ -0.5
RAB5A-204ENST00000443878 TAL2Q16559 108 aa11.92□□□□□ -0.5
RAB5A-204ENST00000443878 SCGB1D1O95968 90 aa11.91□□□□□ -0.5
RAB5A-204ENST00000443878 Q8N377 158 aa11.91□□□□□ -0.5
RAB5A-204ENST00000443878 TEX49A0A1B0GTD5 131 aa11.89□□□□□ -0.51
RAB5A-204ENST00000443878 NHP2Q9NX24 153 aaKnown RBP11.89□□□□□ -0.51
RAB5A-204ENST00000443878 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
RAB5A-204ENST00000443878 A0A0U1RQV1 116 aa11.86□□□□□ -0.51
RAB5A-204ENST00000443878 DEFB105AQ8NG35 78 aa11.86□□□□□ -0.51
RAB5A-204ENST00000443878 VAMP3Q15836 100 aa11.85□□□□□ -0.51
RAB5A-204ENST00000443878 KRTAP13-3Q3SY46 172 aa11.84□□□□□ -0.51
RAB5A-204ENST00000443878 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
RAB5A-204ENST00000443878 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.52
RAB5A-204ENST00000443878 COX8AP10176 69 aa11.83□□□□□ -0.52
RAB5A-204ENST00000443878 Q1RN00 199 aa11.82□□□□□ -0.52
RAB5A-204ENST00000443878 DLEU1O43261 78 aa11.81□□□□□ -0.52
RAB5A-204ENST00000443878 PRO1933Q9H354 126 aa11.81□□□□□ -0.52
RAB5A-204ENST00000443878 CD164Q04900 197 aa11.8□□□□□ -0.52
RAB5A-204ENST00000443878 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
RAB5A-204ENST00000443878 LINC01547P58512 204 aaPredicted RBP11.79□□□□□ -0.52
RAB5A-204ENST00000443878 SMIM29Q86T20 159 aa11.77□□□□□ -0.53
RAB5A-204ENST00000443878 HRCT1Q6UXD1 115 aa11.76□□□□□ -0.53
RAB5A-204ENST00000443878 LINC00575Q6W349 94 aa11.75□□□□□ -0.53
RAB5A-204ENST00000443878 MUC2Q02817 5179 aa11.75□□□□□ -0.53
RAB5A-204ENST00000443878 H7C2G1 150 aa11.74□□□□□ -0.53
RAB5A-204ENST00000443878 hADV29S1A0JD25 119 aa11.72□□□□□ -0.53
RAB5A-204ENST00000443878 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
RAB5A-204ENST00000443878 SPATA45Q537H7 98 aa11.71□□□□□ -0.53
RAB5A-204ENST00000443878 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
RAB5A-204ENST00000443878 HIGD1BQ9P298 99 aa11.71□□□□□ -0.53
RAB5A-204ENST00000443878 PAM16Q9Y3D7 125 aa11.71□□□□□ -0.53
RAB5A-204ENST00000443878 MUC17Q685J3 4493 aa11.71□□□□□ -0.54
RAB5A-204ENST00000443878 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
RAB5A-204ENST00000443878 C12orf57Q99622 126 aa11.7□□□□□ -0.54
RAB5A-204ENST00000443878 F8WEM9 126 aa11.69□□□□□ -0.54
RAB5A-204ENST00000443878 ASB16-AS1Q495Z4 193 aa11.69□□□□□ -0.54
RAB5A-204ENST00000443878 Q5XG85 94 aa11.69□□□□□ -0.54
RAB5A-204ENST00000443878 SEC61BP60468 96 aaKnown RBP11.68□□□□□ -0.54
RAB5A-204ENST00000443878 Q6ZQY7 126 aa11.68□□□□□ -0.54
RAB5A-204ENST00000443878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.65□□□□□ -0.54
RAB5A-204ENST00000443878 RAB37Q96AX2 223 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms