RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
LIN54-202ENST00000442461 CEP295Q9C0D2 2601 aa6.86□□□□□ -1.31
LIN54-202ENST00000442461 A0A096LNT2 108 aa6.86□□□□□ -1.31
LIN54-202ENST00000442461 UNC80Q8N2C7 3258 aa6.85□□□□□ -1.31
LIN54-202ENST00000442461 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
LIN54-202ENST00000442461 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
LIN54-202ENST00000442461 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
LIN54-202ENST00000442461 IGFL1Q6UW32 110 aa6.83□□□□□ -1.32
LIN54-202ENST00000442461 X6R8D5 127 aa6.83□□□□□ -1.32
LIN54-202ENST00000442461 LINC00313P59037 77 aa6.83□□□□□ -1.32
LIN54-202ENST00000442461 CDH23Q9H251 3354 aa6.83□□□□□ -1.32
LIN54-202ENST00000442461 IGLV5-48A0A075B6I7 105 aa6.83□□□□□ -1.32
LIN54-202ENST00000442461 PHF5AQ7RTV0 110 aaKnown RBP6.82□□□□□ -1.32
LIN54-202ENST00000442461 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
LIN54-202ENST00000442461 CHD7Q9P2D1 2997 aa6.81□□□□□ -1.32
LIN54-202ENST00000442461 ANKRD11Q6UB99 2663 aaPredicted RBP6.81□□□□□ -1.32
LIN54-202ENST00000442461 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
LIN54-202ENST00000442461 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
LIN54-202ENST00000442461 COL27A1Q8IZC6 1860 aaPredicted RBP6.8□□□□□ -1.32
LIN54-202ENST00000442461 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
LIN54-202ENST00000442461 DSCR10P59022 87 aa6.79□□□□□ -1.32
LIN54-202ENST00000442461 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
LIN54-202ENST00000442461 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
LIN54-202ENST00000442461 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
LIN54-202ENST00000442461 CHD8Q9HCK8 2581 aa6.78□□□□□ -1.32
LIN54-202ENST00000442461 PRUNE2Q8WUY3 3088 aa6.77□□□□□ -1.33
LIN54-202ENST00000442461 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
LIN54-202ENST00000442461 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
LIN54-202ENST00000442461 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
LIN54-202ENST00000442461 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
LIN54-202ENST00000442461 PRO3102Q9H379 93 aa6.74□□□□□ -1.33
LIN54-202ENST00000442461 SPRR4Q96PI1 79 aa6.73□□□□□ -1.33
LIN54-202ENST00000442461 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
LIN54-202ENST00000442461 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
LIN54-202ENST00000442461 CR1P17927 2039 aa6.72□□□□□ -1.33
LIN54-202ENST00000442461 H3BNG1 76 aa6.72□□□□□ -1.33
LIN54-202ENST00000442461 A0A1B0GVX0 72 aa6.71□□□□□ -1.33
LIN54-202ENST00000442461 FAM168BA1KXE4 195 aa6.71□□□□□ -1.33
LIN54-202ENST00000442461 SPINK7P58062 85 aa6.71□□□□□ -1.33
LIN54-202ENST00000442461 SPTBN4Q9H254 2564 aa6.7□□□□□ -1.34
LIN54-202ENST00000442461 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
LIN54-202ENST00000442461 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
LIN54-202ENST00000442461 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
LIN54-202ENST00000442461 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
LIN54-202ENST00000442461 CHD9Q3L8U1 2897 aa6.68□□□□□ -1.34
LIN54-202ENST00000442461 XIRP2A4UGR9 3374 aa6.67□□□□□ -1.34
LIN54-202ENST00000442461 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
LIN54-202ENST00000442461 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
LIN54-202ENST00000442461 TRIOO75962 3097 aa6.65□□□□□ -1.34
LIN54-202ENST00000442461 J3QKU1 62 aa6.65□□□□□ -1.34
LIN54-202ENST00000442461 GIG44P09565 113 aaPredicted RBP6.64□□□□□ -1.35
LIN54-202ENST00000442461 A6NN06 94 aa6.64□□□□□ -1.35
LIN54-202ENST00000442461 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
LIN54-202ENST00000442461 Q8NAQ8 132 aa6.63□□□□□ -1.35
LIN54-202ENST00000442461 LINC00612Q8N6U2 182 aa6.63□□□□□ -1.35
LIN54-202ENST00000442461 TLX1NBP0CAT3 122 aa6.62□□□□□ -1.35
LIN54-202ENST00000442461 HRES1P13985 223 aa6.62□□□□□ -1.35
LIN54-202ENST00000442461 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
LIN54-202ENST00000442461 Q8NDZ9 215 aa6.61□□□□□ -1.35
LIN54-202ENST00000442461 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
LIN54-202ENST00000442461 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
LIN54-202ENST00000442461 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
LIN54-202ENST00000442461 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
LIN54-202ENST00000442461 DNAH10OSP0CZ25 163 aa6.58□□□□□ -1.36
LIN54-202ENST00000442461 DNAH14Q0VDD8 3507 aa6.58□□□□□ -1.36
LIN54-202ENST00000442461 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
LIN54-202ENST00000442461 VCANP13611 3396 aa6.57□□□□□ -1.36
LIN54-202ENST00000442461 KRTAP10-9P60411 292 aa6.56□□□□□ -1.36
LIN54-202ENST00000442461 TRANK1O15050 2925 aa6.56□□□□□ -1.36
LIN54-202ENST00000442461 USP24Q9UPU5 2620 aa6.56□□□□□ -1.36
LIN54-202ENST00000442461 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
LIN54-202ENST00000442461 EPG5Q9HCE0 2579 aa6.55□□□□□ -1.36
LIN54-202ENST00000442461 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
LIN54-202ENST00000442461 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
LIN54-202ENST00000442461 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
LIN54-202ENST00000442461 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
LIN54-202ENST00000442461 A8MU10 97 aa6.53□□□□□ -1.36
LIN54-202ENST00000442461 CFAP54Q96N23 3096 aa6.53□□□□□ -1.36
LIN54-202ENST00000442461 RTL8CO15255 209 aa6.53□□□□□ -1.36
LIN54-202ENST00000442461 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
LIN54-202ENST00000442461 APLNQ9ULZ1 77 aa6.53□□□□□ -1.36
LIN54-202ENST00000442461 Q96NJ1 140 aa6.52□□□□□ -1.37
LIN54-202ENST00000442461 SPEGQ15772 3267 aa6.5□□□□□ -1.37
LIN54-202ENST00000442461 REV3LO60673 3130 aa6.5□□□□□ -1.37
LIN54-202ENST00000442461 AKAP13Q12802 2813 aa6.49□□□□□ -1.37
LIN54-202ENST00000442461 A0A1B0GU33 70 aa6.49□□□□□ -1.37
LIN54-202ENST00000442461 FASNP49327 2511 aaKnown RBP6.49□□□□□ -1.37
LIN54-202ENST00000442461 LCE6AA0A183 80 aa6.49□□□□□ -1.37
LIN54-202ENST00000442461 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
LIN54-202ENST00000442461 SPRR1AP35321 89 aa6.47□□□□□ -1.37
LIN54-202ENST00000442461 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
LIN54-202ENST00000442461 VPS13AQ96RL7 3174 aa6.46□□□□□ -1.37
LIN54-202ENST00000442461 LAMA1P25391 3075 aa6.46□□□□□ -1.38
LIN54-202ENST00000442461 NUPR2A6NF83 97 aa6.46□□□□□ -1.38
LIN54-202ENST00000442461 SPTBN5Q9NRC6 3674 aaKnown RBP6.45□□□□□ -1.38
LIN54-202ENST00000442461 Q8N1X5 172 aa6.45□□□□□ -1.38
LIN54-202ENST00000442461 SMR3AQ99954 134 aa6.45□□□□□ -1.38
LIN54-202ENST00000442461 TNP2Q05952 138 aa6.44□□□□□ -1.38
LIN54-202ENST00000442461 MYO15AQ9UKN7 3530 aa6.43□□□□□ -1.38
LIN54-202ENST00000442461 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms