RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 DNAH12Q6ZR08 3092 aa8.44□□□□□ -1.06
BRPF3-203ENST00000441123 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
BRPF3-203ENST00000441123 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
BRPF3-203ENST00000441123 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
BRPF3-203ENST00000441123 POLQO75417 2590 aa8.43□□□□□ -1.06
BRPF3-203ENST00000441123 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
BRPF3-203ENST00000441123 K7EIL1 84 aa8.42□□□□□ -1.06
BRPF3-203ENST00000441123 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
BRPF3-203ENST00000441123 F8P00451 2351 aa8.4□□□□□ -1.06
BRPF3-203ENST00000441123 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
BRPF3-203ENST00000441123 H7BZZ5 65 aa8.39□□□□□ -1.07
BRPF3-203ENST00000441123 ACANP16112 2415 aa8.39□□□□□ -1.07
BRPF3-203ENST00000441123 IGLV5-48A0A075B6I7 105 aa8.38□□□□□ -1.07
BRPF3-203ENST00000441123 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
BRPF3-203ENST00000441123 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
BRPF3-203ENST00000441123 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
BRPF3-203ENST00000441123 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
BRPF3-203ENST00000441123 J3QL48 77 aa8.36□□□□□ -1.07
BRPF3-203ENST00000441123 SSBP3-AS1Q7Z2R9 100 aa8.36□□□□□ -1.07
BRPF3-203ENST00000441123 COA5Q86WW8 74 aa8.35□□□□□ -1.07
BRPF3-203ENST00000441123 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
BRPF3-203ENST00000441123 ZNF861PO60384 105 aa8.35□□□□□ -1.07
BRPF3-203ENST00000441123 WIPF1O43516 503 aa8.33□□□□□ -1.08
BRPF3-203ENST00000441123 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
BRPF3-203ENST00000441123 Q96NJ1 140 aa8.32□□□□□ -1.08
BRPF3-203ENST00000441123 ATP11AUNQ6ZP68 121 aa8.31□□□□□ -1.08
BRPF3-203ENST00000441123 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
BRPF3-203ENST00000441123 A0A087WTM6 91 aa8.3□□□□□ -1.08
BRPF3-203ENST00000441123 APLNQ9ULZ1 77 aa8.3□□□□□ -1.08
BRPF3-203ENST00000441123 A0A1W2PNN7 141 aa8.28□□□□□ -1.08
BRPF3-203ENST00000441123 EPG5Q9HCE0 2579 aa8.28□□□□□ -1.08
BRPF3-203ENST00000441123 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
BRPF3-203ENST00000441123 A8MUN3 132 aa8.25□□□□□ -1.09
BRPF3-203ENST00000441123 CASC10Q5T4H9 136 aa8.25□□□□□ -1.09
BRPF3-203ENST00000441123 CHD7Q9P2D1 2997 aa8.24□□□□□ -1.09
BRPF3-203ENST00000441123 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
BRPF3-203ENST00000441123 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
BRPF3-203ENST00000441123 CHD9Q3L8U1 2897 aa8.22□□□□□ -1.09
BRPF3-203ENST00000441123 COX6B2Q6YFQ2 88 aa8.21□□□□□ -1.09
BRPF3-203ENST00000441123 FLNBO75369 2602 aaKnown RBP8.21□□□□□ -1.09
BRPF3-203ENST00000441123 DSCR10P59022 87 aa8.21□□□□□ -1.1
BRPF3-203ENST00000441123 IGLV8-61A0A075B6I0 122 aa8.2□□□□□ -1.1
BRPF3-203ENST00000441123 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
BRPF3-203ENST00000441123 UQCR11O14957 56 aa8.19□□□□□ -1.1
BRPF3-203ENST00000441123 CD164Q04900 197 aa8.18□□□□□ -1.1
BRPF3-203ENST00000441123 A0A0G2JQZ4 141 aa8.18□□□□□ -1.1
BRPF3-203ENST00000441123 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
BRPF3-203ENST00000441123 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
BRPF3-203ENST00000441123 SPRR1AP35321 89 aa8.16□□□□□ -1.1
BRPF3-203ENST00000441123 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
BRPF3-203ENST00000441123 CR1P17927 2039 aa8.14□□□□□ -1.11
BRPF3-203ENST00000441123 Q1T7F1 81 aa8.14□□□□□ -1.11
BRPF3-203ENST00000441123 CEP350Q5VT06 3117 aa8.13□□□□□ -1.11
BRPF3-203ENST00000441123 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
BRPF3-203ENST00000441123 HECTD1Q9ULT8 2610 aa8.12□□□□□ -1.11
BRPF3-203ENST00000441123 TRANK1O15050 2925 aa8.12□□□□□ -1.11
BRPF3-203ENST00000441123 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
BRPF3-203ENST00000441123 HTTP42858 3142 aa8.11□□□□□ -1.11
BRPF3-203ENST00000441123 Q8NDZ9 215 aa8.11□□□□□ -1.11
BRPF3-203ENST00000441123 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
BRPF3-203ENST00000441123 USP24Q9UPU5 2620 aa8.09□□□□□ -1.11
BRPF3-203ENST00000441123 SPRR1BP22528 89 aa8.07□□□□□ -1.12
BRPF3-203ENST00000441123 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
BRPF3-203ENST00000441123 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
BRPF3-203ENST00000441123 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
BRPF3-203ENST00000441123 UTRNP46939 3433 aa8.05□□□□□ -1.12
BRPF3-203ENST00000441123 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
BRPF3-203ENST00000441123 KTN1-AS1Q86SY8 53 aa8.03□□□□□ -1.12
BRPF3-203ENST00000441123 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
BRPF3-203ENST00000441123 C5orf42Q9H799 3197 aa8.02□□□□□ -1.13
BRPF3-203ENST00000441123 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
BRPF3-203ENST00000441123 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
BRPF3-203ENST00000441123 PRRC2CQ9Y520 2896 aaKnown RBP8□□□□□ -1.13
BRPF3-203ENST00000441123 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
BRPF3-203ENST00000441123 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
BRPF3-203ENST00000441123 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
BRPF3-203ENST00000441123 Q5XG85 94 aa7.97□□□□□ -1.13
BRPF3-203ENST00000441123 Q75L30 129 aa7.97□□□□□ -1.13
BRPF3-203ENST00000441123 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
BRPF3-203ENST00000441123 LCA10Q71F78 164 aa7.94□□□□□ -1.14
BRPF3-203ENST00000441123 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
BRPF3-203ENST00000441123 TNP2Q05952 138 aa7.93□□□□□ -1.14
BRPF3-203ENST00000441123 ATRQ13535 2644 aa7.93□□□□□ -1.14
BRPF3-203ENST00000441123 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
BRPF3-203ENST00000441123 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
BRPF3-203ENST00000441123 MAST4O15021 2626 aa7.91□□□□□ -1.14
BRPF3-203ENST00000441123 HRES1P13985 223 aa7.89□□□□□ -1.15
BRPF3-203ENST00000441123 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
BRPF3-203ENST00000441123 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
BRPF3-203ENST00000441123 FLNAP21333 2647 aaKnown RBP7.88□□□□□ -1.15
BRPF3-203ENST00000441123 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
BRPF3-203ENST00000441123 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
BRPF3-203ENST00000441123 Q8N1X5 172 aa7.86□□□□□ -1.15
BRPF3-203ENST00000441123 LINC00483Q53H64 154 aa7.86□□□□□ -1.15
BRPF3-203ENST00000441123 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
BRPF3-203ENST00000441123 Q6ZSA8 131 aa7.83□□□□□ -1.16
BRPF3-203ENST00000441123 KRTAP1-5Q9BYS1 174 aa7.83□□□□□ -1.16
BRPF3-203ENST00000441123 A0A0D9SG42 100 aa7.82□□□□□ -1.16
BRPF3-203ENST00000441123 ZCCHC13Q8WW36 166 aaKnown RBP7.81□□□□□ -1.16
BRPF3-203ENST00000441123 PCNTO95613 3336 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms