RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 LOC110117498A0A087WWA1 95 aa3.15□□□□□ -1.9
EDEM3-203ENST00000439962 A0A087WYN8 130 aa3.15□□□□□ -1.9
EDEM3-203ENST00000439962 CCKP06307 115 aa3.15□□□□□ -1.9
EDEM3-203ENST00000439962 KRTAP10-2P60368 255 aa3.15□□□□□ -1.9
EDEM3-203ENST00000439962 HIST1H4AP62805 103 aaKnown RBP3.15□□□□□ -1.9
EDEM3-203ENST00000439962 FAT1Q14517 4588 aa3.15□□□□□ -1.91
EDEM3-203ENST00000439962 IGKV2D-24A0A075B6R9 120 aa3.15□□□□□ -1.91
EDEM3-203ENST00000439962 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
EDEM3-203ENST00000439962 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.91
EDEM3-203ENST00000439962 DNAH17Q9UFH2 4485 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 ZNF561-AS1K7EIQ3 104 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 ATOX1O00244 68 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
EDEM3-203ENST00000439962 Q6ZR54 194 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 PLA2G2DQ9UNK4 145 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 DNAH5Q8TE73 4624 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 DYNC1H1Q14204 4646 aaKnown RBP3.14□□□□□ -1.91
EDEM3-203ENST00000439962 A0A1B0GW54 56 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 LINC01556Q5JQF7 62 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 ENHOQ6UWT2 76 aa3.14□□□□□ -1.91
EDEM3-203ENST00000439962 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
EDEM3-203ENST00000439962 UQCRQO14949 82 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 KRTAP26-1Q6PEX3 210 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 hADV29S1A0JD25 119 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
EDEM3-203ENST00000439962 M0R378 163 aa3.12□□□□□ -1.91
EDEM3-203ENST00000439962 DIRC1Q969H9 104 aa3.12□□□□□ -1.91
EDEM3-203ENST00000439962 APOBP04114 4563 aaKnown RBP3.11□□□□□ -1.91
EDEM3-203ENST00000439962 IGLV5-37A0A075B6J1 123 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 TRAV23DV6A0A075B6W5 121 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 NDUFC2-KCTD14E9PQ53 114 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
EDEM3-203ENST00000439962 C3orf22Q8N5N4 141 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 RMI2Q96E14 147 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 LINC00526Q96FQ7 95 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 RPL18AQ02543 176 aaKnown RBP3.11□□□□□ -1.91
EDEM3-203ENST00000439962 C6orf99Q4VX62 202 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 UNQ6190/PRO20217Q6UXQ8 127 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 SMIM20Q8N5G0 67 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 DPH3Q96FX2 82 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 C6orf48Q9UBA6 75 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 HSPG2P98160 4391 aa3.11□□□□□ -1.91
EDEM3-203ENST00000439962 FAM236AA0A1B0GUQ0 79 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 FAM236BA0A1B0GV22 79 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 VPREB1P12018 145 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 COX7CP15954 63 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 RBM3P98179 157 aaKnown RBP3.1□□□□□ -1.91
EDEM3-203ENST00000439962 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 DMBT1Q9UGM3 2413 aaPredicted RBP3.1□□□□□ -1.91
EDEM3-203ENST00000439962 CRYGAP11844 174 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 COX7BP24311 80 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 CXCL6P80162 114 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 Q6ZQT0 140 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 LINC00336Q6ZUF6 198 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 CAMK2N2Q96S95 79 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 C1orf43Q9BWL3 253 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 ZNF73O43830 326 aaPredicted RBP3.1□□□□□ -1.91
EDEM3-203ENST00000439962 UPK3BQ9BT76 320 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 KRTAP4-5Q9BYR2 181 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 LINC00846Q9NV44 126 aa3.1□□□□□ -1.91
EDEM3-203ENST00000439962 ABCA13Q86UQ4 5058 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 A0A087WTM6 91 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 IGLV5-52A0A0A0MRZ9 124 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 NCR3O14931 201 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 C10orf25Q5T742 122 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 C15orf56Q8N910 161 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 HERC2O95714 4834 aa3.09□□□□□ -1.91
EDEM3-203ENST00000439962 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.92
EDEM3-203ENST00000439962 A0A1B0GVY2 172 aa3.09□□□□□ -1.92
EDEM3-203ENST00000439962 HIGD2BQ4VC39 106 aa3.09□□□□□ -1.92
EDEM3-203ENST00000439962 SERP2Q8N6R1 65 aa3.09□□□□□ -1.92
EDEM3-203ENST00000439962 DSCR8Q96T75 97 aa3.09□□□□□ -1.92
EDEM3-203ENST00000439962 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 CCDC179H3BU77 68 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZRN7 208 aaPredicted RBP3.08□□□□□ -1.92
EDEM3-203ENST00000439962 LINC00528Q8N1L1 170 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 KCNQ1DNQ9H478 68 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 PRYO14603 147 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 SYCNQ0VAF6 134 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 C9orf116Q5BN46 136 aaPredicted RBP3.08□□□□□ -1.92
EDEM3-203ENST00000439962 Q8NDZ9 215 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 KRTAP17-1Q9BYP8 105 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 FAM30AQ9NZY2 134 aa3.08□□□□□ -1.92
EDEM3-203ENST00000439962 B5MCH6 92 aa3.07□□□□□ -1.92
EDEM3-203ENST00000439962 C9orf129Q5T035 196 aaKnown RBP3.07□□□□□ -1.92
EDEM3-203ENST00000439962 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
EDEM3-203ENST00000439962 SLPIP03973 132 aa3.07□□□□□ -1.92
EDEM3-203ENST00000439962 RPS28P62857 69 aaKnown RBP3.07□□□□□ -1.92
EDEM3-203ENST00000439962 C9orf153Q5TBE3 101 aa3.07□□□□□ -1.92
EDEM3-203ENST00000439962 Q6ZRU5 148 aa3.07□□□□□ -1.92
EDEM3-203ENST00000439962 IGKV2-24A0A0C4DH68 120 aa3.06□□□□□ -1.92
EDEM3-203ENST00000439962 PRR3P79522 188 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 626.7 ms