RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TSPAN13O95857 204 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 CTAG1AP78358 180 aa6.16□□□□□ -1.42
MCF2L-216ENST00000439475 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 ANKRD39Q53RE8 183 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 Q6ZVH6 145 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 HIST3H2BBQ8N257 126 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 LINC00304Q8N9R0 145 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 LITAFQ99732 161 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.42
MCF2L-216ENST00000439475 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 ZNF73O43830 326 aaPredicted RBP6.14□□□□□ -1.43
MCF2L-216ENST00000439475 IFITM1P13164 125 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 PRR4Q16378 134 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 C4orf48Q5BLP8 95 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 Q6ZRX8 168 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
MCF2L-216ENST00000439475 EIF4EBP3O60516 100 aaPredicted RBP6.13□□□□□ -1.43
MCF2L-216ENST00000439475 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
MCF2L-216ENST00000439475 PPDPFQ9H3Y8 114 aa6.12□□□□□ -1.43
MCF2L-216ENST00000439475 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
MCF2L-216ENST00000439475 PCP2Q8IVA1 136 aa6.11□□□□□ -1.43
MCF2L-216ENST00000439475 C3orf22Q8N5N4 141 aa6.11□□□□□ -1.43
MCF2L-216ENST00000439475 SCGB1D1O95968 90 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 LINC00483Q53H64 154 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 MUSTN1Q8IVN3 82 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 Q9BRP9 147 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
MCF2L-216ENST00000439475 A6NDN8 102 aa6.08□□□□□ -1.44
MCF2L-216ENST00000439475 ERC2-IT1O76042 136 aa6.08□□□□□ -1.44
MCF2L-216ENST00000439475 TRAV13-2A0A0B4J235 113 aa6.07□□□□□ -1.44
MCF2L-216ENST00000439475 COX7BP24311 80 aa6.07□□□□□ -1.44
MCF2L-216ENST00000439475 C6orf99Q4VX62 202 aa6.07□□□□□ -1.44
MCF2L-216ENST00000439475 SLC25A34Q6PIV7 304 aa6.07□□□□□ -1.44
MCF2L-216ENST00000439475 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
MCF2L-216ENST00000439475 Q8NBF4 154 aa6.06□□□□□ -1.44
MCF2L-216ENST00000439475 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
MCF2L-216ENST00000439475 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
MCF2L-216ENST00000439475 SPINK1P00995 79 aa6.05□□□□□ -1.44
MCF2L-216ENST00000439475 MOBPQ13875 183 aa6.05□□□□□ -1.44
MCF2L-216ENST00000439475 A4D1N5 150 aa6.04□□□□□ -1.44
MCF2L-216ENST00000439475 ELOF1P60002 83 aaKnown RBP6.04□□□□□ -1.44
MCF2L-216ENST00000439475 TAL2Q16559 108 aa6.04□□□□□ -1.44
MCF2L-216ENST00000439475 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
MCF2L-216ENST00000439475 VAMP3Q15836 100 aa6.03□□□□□ -1.44
MCF2L-216ENST00000439475 ST20-AS1Q8NBB2 130 aa6.03□□□□□ -1.44
MCF2L-216ENST00000439475 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
MCF2L-216ENST00000439475 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
MCF2L-216ENST00000439475 SPRR1BP22528 89 aa6.02□□□□□ -1.45
MCF2L-216ENST00000439475 NHP2Q9NX24 153 aaKnown RBP6.02□□□□□ -1.45
MCF2L-216ENST00000439475 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
MCF2L-216ENST00000439475 SLC25A20O43772 301 aa6.01□□□□□ -1.45
MCF2L-216ENST00000439475 COX8AP10176 69 aa6.01□□□□□ -1.45
MCF2L-216ENST00000439475 HIST1H4GQ99525 98 aa6.01□□□□□ -1.45
MCF2L-216ENST00000439475 TEX49A0A1B0GTD5 131 aa6□□□□□ -1.45
MCF2L-216ENST00000439475 DLEU1O43261 78 aa6□□□□□ -1.45
MCF2L-216ENST00000439475 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
MCF2L-216ENST00000439475 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
MCF2L-216ENST00000439475 DEFB105AQ8NG35 78 aa6□□□□□ -1.45
MCF2L-216ENST00000439475 LRP2P98164 4655 aa5.99□□□□□ -1.45
MCF2L-216ENST00000439475 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
MCF2L-216ENST00000439475 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
MCF2L-216ENST00000439475 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
MCF2L-216ENST00000439475 LPAP08519 4548 aa5.98□□□□□ -1.45
MCF2L-216ENST00000439475 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
MCF2L-216ENST00000439475 SPATA45Q537H7 98 aa5.97□□□□□ -1.45
MCF2L-216ENST00000439475 VAMP8Q9BV40 100 aa5.97□□□□□ -1.45
MCF2L-216ENST00000439475 PAM16Q9Y3D7 125 aa5.97□□□□□ -1.45
MCF2L-216ENST00000439475 C14orf144Q96I85 54 aa5.96□□□□□ -1.46
MCF2L-216ENST00000439475 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
MCF2L-216ENST00000439475 Q1RN00 199 aa5.95□□□□□ -1.46
MCF2L-216ENST00000439475 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
MCF2L-216ENST00000439475 HIGD1BQ9P298 99 aa5.95□□□□□ -1.46
MCF2L-216ENST00000439475 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
MCF2L-216ENST00000439475 BVES-AS1Q5T3Y7 98 aa5.94□□□□□ -1.46
MCF2L-216ENST00000439475 Q8N377 158 aa5.94□□□□□ -1.46
MCF2L-216ENST00000439475 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
MCF2L-216ENST00000439475 SNCGO76070 127 aa5.93□□□□□ -1.46
MCF2L-216ENST00000439475 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
MCF2L-216ENST00000439475 RAB37Q96AX2 223 aa5.93□□□□□ -1.46
MCF2L-216ENST00000439475 CD164Q04900 197 aa5.92□□□□□ -1.46
MCF2L-216ENST00000439475 HRCT1Q6UXD1 115 aa5.92□□□□□ -1.46
MCF2L-216ENST00000439475 C12orf57Q99622 126 aa5.92□□□□□ -1.46
MCF2L-216ENST00000439475 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
MCF2L-216ENST00000439475 A6NJY4 79 aa5.91□□□□□ -1.46
MCF2L-216ENST00000439475 F8WEM9 126 aa5.91□□□□□ -1.46
MCF2L-216ENST00000439475 H7C2G1 150 aa5.91□□□□□ -1.46
MCF2L-216ENST00000439475 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
MCF2L-216ENST00000439475 SMIM29Q86T20 159 aa5.9□□□□□ -1.46
MCF2L-216ENST00000439475 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 H0YGX0 51 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 CFC1P0CG37 223 aa5.89□□□□□ -1.47
MCF2L-216ENST00000439475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.89□□□□□ -1.47
MCF2L-216ENST00000439475 Q6ZQY7 126 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms