RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
CHD3-204ENST00000439235 LRP1BQ9NZR2 4599 aa12.88□□□□□ -0.35
CHD3-204ENST00000439235 ZNF73O43830 326 aaPredicted RBP12.88□□□□□ -0.35
CHD3-204ENST00000439235 CDK2AP2O75956 126 aa12.88□□□□□ -0.35
CHD3-204ENST00000439235 RPL28P46779 137 aaKnown RBP12.88□□□□□ -0.35
CHD3-204ENST00000439235 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
CHD3-204ENST00000439235 KIAA1109Q2LD37 5005 aa12.87□□□□□ -0.35
CHD3-204ENST00000439235 C6orf99Q4VX62 202 aa12.86□□□□□ -0.35
CHD3-204ENST00000439235 SPRR1AP35321 89 aa12.85□□□□□ -0.35
CHD3-204ENST00000439235 PSMB2P49721 201 aa12.85□□□□□ -0.35
CHD3-204ENST00000439235 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
CHD3-204ENST00000439235 TAX1BP3O14907 124 aa12.83□□□□□ -0.36
CHD3-204ENST00000439235 PSORS1C2Q9UIG4 136 aa12.83□□□□□ -0.36
CHD3-204ENST00000439235 TRBV7-6A0A0J9YX20 115 aa12.82□□□□□ -0.36
CHD3-204ENST00000439235 VAMP3Q15836 100 aa12.82□□□□□ -0.36
CHD3-204ENST00000439235 TRIAP1O43715 76 aa12.81□□□□□ -0.36
CHD3-204ENST00000439235 BCE1O60756 84 aa12.81□□□□□ -0.36
CHD3-204ENST00000439235 COX6CP09669 75 aa12.81□□□□□ -0.36
CHD3-204ENST00000439235 COX7BP24311 80 aa12.8□□□□□ -0.36
CHD3-204ENST00000439235 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CHD3-204ENST00000439235 FAM19A1Q7Z5A9 133 aa12.8□□□□□ -0.36
CHD3-204ENST00000439235 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
CHD3-204ENST00000439235 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
CHD3-204ENST00000439235 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
CHD3-204ENST00000439235 H3BUT2 72 aa12.78□□□□□ -0.36
CHD3-204ENST00000439235 ELOF1P60002 83 aaKnown RBP12.78□□□□□ -0.36
CHD3-204ENST00000439235 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
CHD3-204ENST00000439235 H0YGX0 51 aa12.77□□□□□ -0.37
CHD3-204ENST00000439235 SMR3BP02814 79 aaPredicted RBP12.77□□□□□ -0.37
CHD3-204ENST00000439235 UBE2AP49459 152 aa12.77□□□□□ -0.37
CHD3-204ENST00000439235 LYRM7Q5U5X0 104 aa12.77□□□□□ -0.37
CHD3-204ENST00000439235 B5MCH6 92 aa12.76□□□□□ -0.37
CHD3-204ENST00000439235 SCGB1C2P0DMR2 95 aa12.76□□□□□ -0.37
CHD3-204ENST00000439235 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
CHD3-204ENST00000439235 Q6ZRX8 168 aa12.76□□□□□ -0.37
CHD3-204ENST00000439235 H0Y9J4 135 aa12.74□□□□□ -0.37
CHD3-204ENST00000439235 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
CHD3-204ENST00000439235 PRLHP81277 87 aa12.73□□□□□ -0.37
CHD3-204ENST00000439235 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
CHD3-204ENST00000439235 A0A1W2PPM0 123 aa12.71□□□□□ -0.37
CHD3-204ENST00000439235 DHRS4-AS1Q9P1J3 65 aa12.71□□□□□ -0.37
CHD3-204ENST00000439235 SLC25A20O43772 301 aa12.7□□□□□ -0.38
CHD3-204ENST00000439235 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
CHD3-204ENST00000439235 FABP2P12104 132 aa12.7□□□□□ -0.38
CHD3-204ENST00000439235 KRTAP13-1Q8IUC0 172 aa12.7□□□□□ -0.38
CHD3-204ENST00000439235 FAM229AH3BQW9 127 aa12.69□□□□□ -0.38
CHD3-204ENST00000439235 SNCGO76070 127 aa12.69□□□□□ -0.38
CHD3-204ENST00000439235 LINC00575Q6W349 94 aa12.69□□□□□ -0.38
CHD3-204ENST00000439235 ZNF861PO60384 105 aa12.68□□□□□ -0.38
CHD3-204ENST00000439235 CLEC2BQ92478 149 aa12.68□□□□□ -0.38
CHD3-204ENST00000439235 A0A1B0GX51 115 aa12.67□□□□□ -0.38
CHD3-204ENST00000439235 PLA2G1BP04054 148 aaKnown RBP12.67□□□□□ -0.38
CHD3-204ENST00000439235 Q9BRP9 147 aa12.67□□□□□ -0.38
CHD3-204ENST00000439235 HIGD2AQ9BW72 106 aa12.67□□□□□ -0.38
CHD3-204ENST00000439235 TRBV20-1A0A075B6N2 111 aa12.65□□□□□ -0.38
CHD3-204ENST00000439235 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
CHD3-204ENST00000439235 SMCR5Q8TEV8 140 aa12.65□□□□□ -0.38
CHD3-204ENST00000439235 FAM218AQ96MZ4 157 aa12.65□□□□□ -0.38
CHD3-204ENST00000439235 LST1O00453 97 aa12.63□□□□□ -0.39
CHD3-204ENST00000439235 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
CHD3-204ENST00000439235 TCL1BO95988 128 aa12.62□□□□□ -0.39
CHD3-204ENST00000439235 Q5VSD8 79 aa12.62□□□□□ -0.39
CHD3-204ENST00000439235 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
CHD3-204ENST00000439235 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
CHD3-204ENST00000439235 DNAL4O96015 105 aa12.6□□□□□ -0.39
CHD3-204ENST00000439235 TRACP01848 142 aa12.6□□□□□ -0.39
CHD3-204ENST00000439235 Q8N1X5 172 aa12.6□□□□□ -0.39
CHD3-204ENST00000439235 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
CHD3-204ENST00000439235 ERC2-IT1O76042 136 aa12.58□□□□□ -0.4
CHD3-204ENST00000439235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.58□□□□□ -0.4
CHD3-204ENST00000439235 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
CHD3-204ENST00000439235 KRTAP4-5Q9BYR2 181 aa12.57□□□□□ -0.4
CHD3-204ENST00000439235 ZNF706Q9Y5V0 76 aaPredicted RBP12.57□□□□□ -0.4
CHD3-204ENST00000439235 Q6ZQY7 126 aa12.56□□□□□ -0.4
CHD3-204ENST00000439235 K7EP34 96 aa12.55□□□□□ -0.4
CHD3-204ENST00000439235 GTF2H5Q6ZYL4 71 aa12.54□□□□□ -0.4
CHD3-204ENST00000439235 GHRHP01286 108 aa12.53□□□□□ -0.4
CHD3-204ENST00000439235 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
CHD3-204ENST00000439235 HSPG2P98160 4391 aa12.53□□□□□ -0.4
CHD3-204ENST00000439235 ST20-AS1Q8NBB2 130 aa12.52□□□□□ -0.41
CHD3-204ENST00000439235 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
CHD3-204ENST00000439235 H3BMG7 143 aa12.5□□□□□ -0.41
CHD3-204ENST00000439235 SPRR4Q96PI1 79 aa12.5□□□□□ -0.41
CHD3-204ENST00000439235 IGLV5-48A0A075B6I7 105 aa12.49□□□□□ -0.41
CHD3-204ENST00000439235 H3BQ85 93 aa12.49□□□□□ -0.41
CHD3-204ENST00000439235 A0A1B0GV90 55 aa12.48□□□□□ -0.41
CHD3-204ENST00000439235 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
CHD3-204ENST00000439235 PPDPFLQ8WWR9 84 aa12.48□□□□□ -0.41
CHD3-204ENST00000439235 TEX49A0A1B0GTD5 131 aa12.47□□□□□ -0.41
CHD3-204ENST00000439235 C9JAW5 83 aa12.47□□□□□ -0.41
CHD3-204ENST00000439235 GAGE2AQ6NT46 116 aa12.47□□□□□ -0.41
CHD3-204ENST00000439235 SPRR1BP22528 89 aa12.45□□□□□ -0.42
CHD3-204ENST00000439235 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
CHD3-204ENST00000439235 VPS13BQ7Z7G8 4022 aa12.44□□□□□ -0.42
CHD3-204ENST00000439235 FAT1Q14517 4588 aa12.43□□□□□ -0.42
CHD3-204ENST00000439235 TMEM256-PLSCR3K7ERE1 68 aa12.43□□□□□ -0.42
CHD3-204ENST00000439235 LINC00483Q53H64 154 aa12.43□□□□□ -0.42
CHD3-204ENST00000439235 Q8N377 158 aa12.43□□□□□ -0.42
CHD3-204ENST00000439235 BAALC-AS2P0C853 105 aa12.42□□□□□ -0.42
CHD3-204ENST00000439235 H3BT86 120 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms