RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 HSPG2P98160 4391 aa6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 S100A7L2Q5SY68 101 aa6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 Q8N1X5 172 aa6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 NHP2Q9NX24 153 aaKnown RBP6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
HLA-DMB-259ENST00000438510 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 RPL37AP8A6NKH3 93 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 H3BUT2 72 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 Q5VSD8 79 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
HLA-DMB-259ENST00000438510 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
HLA-DMB-259ENST00000438510 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
HLA-DMB-259ENST00000438510 A4D1N5 150 aa6.55□□□□□ -1.36
HLA-DMB-259ENST00000438510 PRYO14603 147 aa6.55□□□□□ -1.36
HLA-DMB-259ENST00000438510 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 IGLV6-57P01721 117 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 OR13C6PQ8NH95 151 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 TMEM126AQ9H061 195 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
HLA-DMB-259ENST00000438510 F8W1H4 67 aa6.53□□□□□ -1.36
HLA-DMB-259ENST00000438510 REG3GQ6UW15 175 aa6.53□□□□□ -1.36
HLA-DMB-259ENST00000438510 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
HLA-DMB-259ENST00000438510 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
HLA-DMB-259ENST00000438510 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
HLA-DMB-259ENST00000438510 K7ERU9 68 aa6.52□□□□□ -1.37
HLA-DMB-259ENST00000438510 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
HLA-DMB-259ENST00000438510 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
HLA-DMB-259ENST00000438510 BCE1O60756 84 aa6.51□□□□□ -1.37
HLA-DMB-259ENST00000438510 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
HLA-DMB-259ENST00000438510 KRTAP4-5Q9BYR2 181 aa6.51□□□□□ -1.37
HLA-DMB-259ENST00000438510 VPS13BQ7Z7G8 4022 aa6.5□□□□□ -1.37
HLA-DMB-259ENST00000438510 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
HLA-DMB-259ENST00000438510 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 CFC1P0CG37 223 aa6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 SPRR1AP35321 89 aa6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 UBE2AP49459 152 aa6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
HLA-DMB-259ENST00000438510 J3QR89 54 aa6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 K7ERJ3 54 aa6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 RPL13AP40429 203 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 DIRC1Q969H9 104 aa6.48□□□□□ -1.37
HLA-DMB-259ENST00000438510 FAT1Q14517 4588 aa6.47□□□□□ -1.37
HLA-DMB-259ENST00000438510 ZNF861PO60384 105 aa6.47□□□□□ -1.37
HLA-DMB-259ENST00000438510 TSPAN13O95857 204 aa6.47□□□□□ -1.37
HLA-DMB-259ENST00000438510 COX6CP09669 75 aa6.47□□□□□ -1.37
HLA-DMB-259ENST00000438510 LINC01600Q96MT4 127 aa6.47□□□□□ -1.37
HLA-DMB-259ENST00000438510 KRTAP4-16G5E9R7 235 aaPredicted RBP6.46□□□□□ -1.38
HLA-DMB-259ENST00000438510 H0Y9J4 135 aa6.46□□□□□ -1.38
HLA-DMB-259ENST00000438510 PRLHP81277 87 aa6.46□□□□□ -1.38
HLA-DMB-259ENST00000438510 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
HLA-DMB-259ENST00000438510 TRBV7-6A0A0J9YX20 115 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 OCIAD2Q56VL3 154 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
HLA-DMB-259ENST00000438510 B5MCH6 92 aa6.44□□□□□ -1.38
HLA-DMB-259ENST00000438510 Q1RN00 199 aa6.44□□□□□ -1.38
HLA-DMB-259ENST00000438510 Q6ZRX8 168 aa6.44□□□□□ -1.38
HLA-DMB-259ENST00000438510 H3BMG7 143 aa6.43□□□□□ -1.38
HLA-DMB-259ENST00000438510 H7C2G1 150 aa6.43□□□□□ -1.38
HLA-DMB-259ENST00000438510 COX7BP24311 80 aa6.43□□□□□ -1.38
HLA-DMB-259ENST00000438510 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
HLA-DMB-259ENST00000438510 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
HLA-DMB-259ENST00000438510 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
HLA-DMB-259ENST00000438510 ATXN8Q156A1 80 aa6.42□□□□□ -1.38
HLA-DMB-259ENST00000438510 HIGD2AQ9BW72 106 aa6.42□□□□□ -1.38
HLA-DMB-259ENST00000438510 SCGB1C2P0DMR2 95 aa6.41□□□□□ -1.38
HLA-DMB-259ENST00000438510 DHRS4-AS1Q9P1J3 65 aa6.41□□□□□ -1.38
HLA-DMB-259ENST00000438510 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
HLA-DMB-259ENST00000438510 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
HLA-DMB-259ENST00000438510 PSMB2P49721 201 aa6.4□□□□□ -1.38
HLA-DMB-259ENST00000438510 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.38
HLA-DMB-259ENST00000438510 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
HLA-DMB-259ENST00000438510 Q9BRP9 147 aa6.39□□□□□ -1.39
HLA-DMB-259ENST00000438510 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
HLA-DMB-259ENST00000438510 H3BT86 120 aa6.38□□□□□ -1.39
HLA-DMB-259ENST00000438510 SLC25A20O43772 301 aa6.38□□□□□ -1.39
HLA-DMB-259ENST00000438510 H0YGX0 51 aa6.37□□□□□ -1.39
HLA-DMB-259ENST00000438510 TCL1BO95988 128 aa6.37□□□□□ -1.39
HLA-DMB-259ENST00000438510 TEN1Q86WV5 123 aa6.37□□□□□ -1.39
HLA-DMB-259ENST00000438510 TRIAP1O43715 76 aa6.36□□□□□ -1.39
HLA-DMB-259ENST00000438510 SNCGO76070 127 aa6.36□□□□□ -1.39
HLA-DMB-259ENST00000438510 LST1O00453 97 aa6.35□□□□□ -1.39
HLA-DMB-259ENST00000438510 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
HLA-DMB-259ENST00000438510 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
HLA-DMB-259ENST00000438510 SPRR4Q96PI1 79 aa6.35□□□□□ -1.39
HLA-DMB-259ENST00000438510 hADV29S1A0JD25 119 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms