RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 COMMD6Q7Z4G1 85 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 DEFB107AQ8IZN7 70 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 PROK2Q9HC23 129 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 AP4S1Q9Y587 144 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 TRAV12-2A0A075B6T6 113 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 TCRBV3S1A0A5B6 114 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 LINC00587B1AMM8 73 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 HMGN4O00479 90 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 IFNGP01579 166 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 HMGN2P05204 90 aaKnown RBP0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 BTG2P78543 158 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 MT1HP80294 61 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 DEFB136Q30KP8 78 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 KRTAP19-6Q3LI70 58 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 MIC13Q5XKP0 118 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 Q6ZUT4 128 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 RPS27LQ71UM5 84 aaKnown RBP0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 VSTM2AQ8TAG5 236 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 SCN3BQ9NY72 215 aa0.69□□□□□ -2.3
TRAPPC13-204ENST00000438419 A0A087WXM4 84 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 A0A0D9SG42 100 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 LOC100130705A0A1B0GUX0 176 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SMIM31A0A1B0GVY4 71 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 M0R2T5 61 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 IFNA17P01571 189 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 APOC1P02654 83 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SLC25A6P12236 298 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 PIPP12273 146 aaPredicted RBP0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPRR2EP22531 72 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPRR2BP35325 72 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPRR2AP35326 72 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 ZNF137PP52743 207 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 FXYD6P3P58550 94 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 SNRPGP62308 76 aaKnown RBP0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 C8orf59Q8N0T1 100 aaPredicted RBP0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 DPH3P1Q9H4G8 78 aa0.68□□□□□ -2.3
TRAPPC13-204ENST00000438419 A0A1B0GWA3 101 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 CPSF4LA6NMK7 179 aaKnown RBP0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 MRPL33O75394 65 aaKnown RBP0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 FGF7P21781 194 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 CCL8P80075 99 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 C12orf73Q69YU5 71 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 ACBD7Q8N6N7 88 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 CMC2Q9NRP2 79 aa0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
TRAPPC13-204ENST00000438419 TRAV1-2A0A0B4J238 106 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 PIGBOS1A0A0B4J2F0 54 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 TEX49A0A1B0GTD5 131 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 FAM25AB3EWG3 89 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 FAM25CB3EWG5 89 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 FAM25GB3EWG6 89 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 PDCD5O14737 125 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 SNAPC5O75971 98 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 CYB5AP00167 134 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPRR2DP22532 72 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 MRPS10P82664 201 aaKnown RBP0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 KLKP1Q107X0 134 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPINK13Q1W4C9 94 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 S100ZQ8WXG8 99 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 PP6455Q8WZ26 134 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPTSSAQ969W0 71 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 S100A13Q99584 98 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 PSMG3Q9BT73 122 aaPredicted RBP0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 AGPAT4-IT1Q9H0P7 198 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 ABRACLQ9P1F3 81 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 NDUFA12Q9UI09 145 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 IER3IP1Q9Y5U9 82 aa0.66□□□□□ -2.3
TRAPPC13-204ENST00000438419 M0R135 149 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 RBP2P50120 134 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 PPP3R1P63098 170 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 SSBP1Q04837 148 aaKnown RBP0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 MEIG1Q5JSS6 88 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 LINC01590Q5TEZ4 76 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPANXN1Q5VSR9 72 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 OR2T2Q6IF00 324 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 TMEM203Q969S6 136 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 S100A16Q96FQ6 103 aaKnown RBP0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 WFDC6Q9BQY6 131 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 RERGLQ9H628 205 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 CACFD1Q9UGQ2 172 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 GNG8Q9UK08 70 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 R4GMQ9 66 aa0.65□□□□□ -2.3
TRAPPC13-204ENST00000438419 NAP1L6A6NFF2 107 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 IQCF6A8MYZ5 107 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 MCRIP1C9JLW8 97 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 DEFB4AO15263 64 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 NDUFB6O95139 128 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 HIST1H1DP16402 221 aaKnown RBP0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 FAUP35544 74 aaKnown RBP0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 DEFB135Q30KP9 77 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 COPS9Q8WXC6 57 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 IFI27L1Q96BM0 104 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 TMEM141Q96I45 108 aa0.64□□□□□ -2.31
TRAPPC13-204ENST00000438419 LINC01600Q96MT4 127 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms