RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 IFI27L1Q96BM0 104 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 MRPL35Q9NZE8 188 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
ECHDC1-208ENST00000436638 COL7A1Q02388 2944 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 IGLV4-60A0A075B6I1 120 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 A6NN06 94 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 REG3AQ06141 175 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 Q1T7F1 81 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 CLPSL2Q6UWE3 100 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 C2orf66Q6UXQ4 117 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 SOSTDC1Q6X4U4 206 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 Q6ZR54 194 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 LINC00269Q8N2A0 174 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 FAM19A2Q8N3H0 131 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 CLEC2BQ92478 149 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 TIMM21Q9BVV7 248 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 UBE2D4Q9Y2X8 147 aa4.12□□□□□ -1.75
ECHDC1-208ENST00000436638 STARD9Q9P2P6 4700 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 RPL39P62891 51 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 MIAQ16674 131 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 DAND5Q8N907 189 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 SCGB3A1Q96QR1 104 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 LINC00474Q9P2X8 69 aa4.11□□□□□ -1.75
ECHDC1-208ENST00000436638 TGP01266 2768 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 A0A0B4J2C4 111 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 LINC01546A6NGU7 62 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 H7BZZ5 65 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 XCL1P47992 114 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 ENHOQ6UWT2 76 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 TMEM141Q96I45 108 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 KRTAP1-5Q9BYS1 174 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
ECHDC1-208ENST00000436638 IGLV10-54A0A075B6I4 117 aa4.09□□□□□ -1.75
ECHDC1-208ENST00000436638 KLKP1Q107X0 134 aa4.09□□□□□ -1.75
ECHDC1-208ENST00000436638 ASB16-AS1Q495Z4 193 aa4.09□□□□□ -1.75
ECHDC1-208ENST00000436638 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-208ENST00000436638 SDIM1Q6ZPB5 146 aa4.09□□□□□ -1.75
ECHDC1-208ENST00000436638 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 ALMS1Q8TCU4 4167 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 IGLV4-3A0A075B6K6 122 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 LOC107984156A0A0G2JMH3 177 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 TRBV10-2A0A0K0K1G8 114 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 LINC00959A0A1B0GUT2 108 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 ATXN8Q156A1 80 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 ADAMTSL4-AS1Q5T5F5 129 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 ARL17AQ8IVW1 177 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 URB1-AS1Q96HZ7 61 aa4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-208ENST00000436638 A0A087X002 238 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 IGIPA6NJ69 53 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 LEPROTO15243 131 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 RTL8CO15255 209 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 PRSS1P07477 247 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 PLECQ15149 4684 aaKnown RBP4.07□□□□□ -1.76
ECHDC1-208ENST00000436638 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
ECHDC1-208ENST00000436638 Q6JHZ5 121 aa4.06□□□□□ -1.76
ECHDC1-208ENST00000436638 Q6ZRN7 208 aaPredicted RBP4.06□□□□□ -1.76
ECHDC1-208ENST00000436638 A0A087WTM6 91 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 A0A096LNJ9 63 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 LECT2O14960 151 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 PRSS2P07478 247 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 UBE2D1P51668 147 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 AMELXQ99217 191 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 SND1-IT1Q9HBX3 110 aa4.05□□□□□ -1.76
ECHDC1-208ENST00000436638 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
ECHDC1-208ENST00000436638 RYR2Q92736 4967 aa4.04□□□□□ -1.76
ECHDC1-208ENST00000436638 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 LRCOL1A6NCL2 159 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 Q8N814 137 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 FAM104AQ969W3 186 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 NDUFA12Q9UI09 145 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 TENM2Q9NT68 2774 aa4.03□□□□□ -1.76
ECHDC1-208ENST00000436638 DNAH1Q9P2D7 4330 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 HYDINQ4G0P3 5121 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 TRAV12-1A0A0B4J245 112 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 IGLV5-39A0A0G2JS06 123 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 COX6A2Q02221 97 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 C2orf82Q6UX34 121 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
ECHDC1-208ENST00000436638 F8VRH5 84 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 SPAG11BQ08648 103 aa4.01□□□□□ -1.77
ECHDC1-208ENST00000436638 SYCNQ0VAF6 134 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms