RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
LSM3P3-201ENST00000436601 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.7
LSM3P3-201ENST00000436601 DNAH2Q9P225 4427 aa4.4□□□□□ -1.7
LSM3P3-201ENST00000436601 TRBV10-3A0A0K0K1G6 114 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 M0QXV9 152 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 TAX1BP3O14907 124 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 RPL13AP40429 203 aaKnown RBP4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 COL5A1-AS1Q5SY13 56 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 S100A7L2Q5SY68 101 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 NKAPP1Q8N9T2 125 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 LINC00167Q96N53 147 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
LSM3P3-201ENST00000436601 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 H7C2G1 150 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 TSPAN13O95857 204 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
LSM3P3-201ENST00000436601 RYR3Q15413 4870 aa4.38□□□□□ -1.71
LSM3P3-201ENST00000436601 HAMPP81172 84 aa4.38□□□□□ -1.71
LSM3P3-201ENST00000436601 SCXQ7RTU7 201 aa4.38□□□□□ -1.71
LSM3P3-201ENST00000436601 NAA38Q9BRA0 125 aaKnown RBP4.38□□□□□ -1.71
LSM3P3-201ENST00000436601 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
LSM3P3-201ENST00000436601 TRAV23DV6A0A075B6W5 121 aa4.37□□□□□ -1.71
LSM3P3-201ENST00000436601 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
LSM3P3-201ENST00000436601 Q1RN00 199 aa4.37□□□□□ -1.71
LSM3P3-201ENST00000436601 IGLV9-49A0A0B4J1Y8 123 aa4.36□□□□□ -1.71
LSM3P3-201ENST00000436601 H3BUT2 72 aa4.36□□□□□ -1.71
LSM3P3-201ENST00000436601 SPRR1AP35321 89 aa4.36□□□□□ -1.71
LSM3P3-201ENST00000436601 XGP55808 180 aa4.36□□□□□ -1.71
LSM3P3-201ENST00000436601 C6orf99Q4VX62 202 aa4.36□□□□□ -1.71
LSM3P3-201ENST00000436601 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 PSMB2P49721 201 aa4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 UBE2BP63146 152 aa4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
LSM3P3-201ENST00000436601 A0A1W2PPM0 123 aa4.34□□□□□ -1.71
LSM3P3-201ENST00000436601 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
LSM3P3-201ENST00000436601 DIRC1Q969H9 104 aa4.34□□□□□ -1.71
LSM3P3-201ENST00000436601 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
LSM3P3-201ENST00000436601 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
LSM3P3-201ENST00000436601 PSORS1C2Q9UIG4 136 aa4.33□□□□□ -1.72
LSM3P3-201ENST00000436601 DNAH11Q96DT5 4516 aa4.33□□□□□ -1.72
LSM3P3-201ENST00000436601 PKD1P98161 4303 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 BCE1O60756 84 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 COX6CP09669 75 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 SCGB1C2P0DMR2 95 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 COX7BP24311 80 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 VAMP3Q15836 100 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 CLEC2BQ92478 149 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
LSM3P3-201ENST00000436601 A0A1B0GV90 55 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 ETDCA0A1B0GVM5 59 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 H0YGX0 51 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 TCL1BO95988 128 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 FABP2P12104 132 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 LINC00575Q6W349 94 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 Q6ZRX8 168 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 FAM19A1Q7Z5A9 133 aa4.31□□□□□ -1.72
LSM3P3-201ENST00000436601 H0Y9J4 135 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 SMR3BP02814 79 aaPredicted RBP4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 PRLHP81277 87 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 Q9BRP9 147 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 SPCS1Q9Y6A9 102 aa4.3□□□□□ -1.72
LSM3P3-201ENST00000436601 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 K7EP34 96 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 LST1O00453 97 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 INAFM2P0DMQ5 153 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 SMCR5Q8TEV8 140 aa4.29□□□□□ -1.72
LSM3P3-201ENST00000436601 hADV29S1A0JD25 119 aa4.28□□□□□ -1.72
LSM3P3-201ENST00000436601 UBE2AP49459 152 aa4.28□□□□□ -1.72
LSM3P3-201ENST00000436601 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
LSM3P3-201ENST00000436601 LYRM7Q5U5X0 104 aa4.28□□□□□ -1.72
LSM3P3-201ENST00000436601 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
LSM3P3-201ENST00000436601 A0A1B0GX51 115 aa4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 H3BMG7 143 aa4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 ZNF861PO60384 105 aa4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 TRACP01848 142 aa4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 DHRS4-AS1Q9P1J3 65 aa4.27□□□□□ -1.73
LSM3P3-201ENST00000436601 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
LSM3P3-201ENST00000436601 SLC25A20O43772 301 aa4.26□□□□□ -1.73
LSM3P3-201ENST00000436601 RPL37AP61513 92 aaKnown RBP4.26□□□□□ -1.73
LSM3P3-201ENST00000436601 ST20-AS1Q8NBB2 130 aa4.26□□□□□ -1.73
LSM3P3-201ENST00000436601 HIGD2AQ9BW72 106 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms