RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 UQCR10Q9UDW1 63 aa10.81□□□□□ -0.68
UBXN1-203ENST00000436354 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
UBXN1-203ENST00000436354 C12orf57Q99622 126 aa10.8□□□□□ -0.68
UBXN1-203ENST00000436354 A0A087X002 238 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 M0R378 163 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 CRYGAP11844 174 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 MUSTN1Q8IVN3 82 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 TYMSOSQ8TAI1 123 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 LINC00167Q96N53 147 aa10.79□□□□□ -0.68
UBXN1-203ENST00000436354 NCR3O14931 201 aa10.77□□□□□ -0.69
UBXN1-203ENST00000436354 RPL28P46779 137 aaKnown RBP10.77□□□□□ -0.69
UBXN1-203ENST00000436354 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
UBXN1-203ENST00000436354 TAL2Q16559 108 aa10.76□□□□□ -0.69
UBXN1-203ENST00000436354 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
UBXN1-203ENST00000436354 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
UBXN1-203ENST00000436354 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
UBXN1-203ENST00000436354 PRO1933Q9H354 126 aa10.75□□□□□ -0.69
UBXN1-203ENST00000436354 GAGE10A6NGK3 116 aa10.73□□□□□ -0.69
UBXN1-203ENST00000436354 BCE1O60756 84 aa10.73□□□□□ -0.69
UBXN1-203ENST00000436354 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
UBXN1-203ENST00000436354 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
UBXN1-203ENST00000436354 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
UBXN1-203ENST00000436354 HSD52Q0P140 79 aa10.71□□□□□ -0.69
UBXN1-203ENST00000436354 LINC00337Q8N6G1 96 aa10.71□□□□□ -0.69
UBXN1-203ENST00000436354 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
UBXN1-203ENST00000436354 FAT4Q6V0I7 4981 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 A4D1N5 150 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 DDTP30046 118 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 CEND1Q8N111 149 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 KCNQ1DNQ9H478 68 aa10.7□□□□□ -0.7
UBXN1-203ENST00000436354 TSTD3H0UI37 97 aa10.69□□□□□ -0.7
UBXN1-203ENST00000436354 PRYO14603 147 aa10.68□□□□□ -0.7
UBXN1-203ENST00000436354 TPRXLQ17RH7 258 aa10.68□□□□□ -0.7
UBXN1-203ENST00000436354 SPRR1AP35321 89 aa10.67□□□□□ -0.7
UBXN1-203ENST00000436354 S100A7L2Q5SY68 101 aa10.67□□□□□ -0.7
UBXN1-203ENST00000436354 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
UBXN1-203ENST00000436354 ANAPC11Q9NYG5 84 aa10.67□□□□□ -0.7
UBXN1-203ENST00000436354 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
UBXN1-203ENST00000436354 KRTAP13-2Q52LG2 175 aa10.66□□□□□ -0.7
UBXN1-203ENST00000436354 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
UBXN1-203ENST00000436354 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.7
UBXN1-203ENST00000436354 CBY1Q9Y3M2 126 aa10.65□□□□□ -0.7
UBXN1-203ENST00000436354 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
UBXN1-203ENST00000436354 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
UBXN1-203ENST00000436354 A6NJY4 79 aa10.64□□□□□ -0.71
UBXN1-203ENST00000436354 FXYD2P54710 66 aa10.64□□□□□ -0.71
UBXN1-203ENST00000436354 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
UBXN1-203ENST00000436354 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
UBXN1-203ENST00000436354 KRTAP4-16G5E9R7 235 aaPredicted RBP10.63□□□□□ -0.71
UBXN1-203ENST00000436354 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
UBXN1-203ENST00000436354 CFC1P0CG37 223 aa10.63□□□□□ -0.71
UBXN1-203ENST00000436354 OR13C6PQ8NH95 151 aa10.63□□□□□ -0.71
UBXN1-203ENST00000436354 UBE2AP49459 152 aa10.62□□□□□ -0.71
UBXN1-203ENST00000436354 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
UBXN1-203ENST00000436354 CTAG1AP78358 180 aa10.61□□□□□ -0.71
UBXN1-203ENST00000436354 A6NDN8 102 aa10.6□□□□□ -0.71
UBXN1-203ENST00000436354 ZNF73O43830 326 aaPredicted RBP10.59□□□□□ -0.71
UBXN1-203ENST00000436354 A0A1B0GWB2 263 aa10.58□□□□□ -0.72
UBXN1-203ENST00000436354 BVES-AS1Q5T3Y7 98 aa10.58□□□□□ -0.72
UBXN1-203ENST00000436354 FAM19A1Q7Z5A9 133 aa10.57□□□□□ -0.72
UBXN1-203ENST00000436354 B5MCH6 92 aa10.56□□□□□ -0.72
UBXN1-203ENST00000436354 M0R143 59 aa10.56□□□□□ -0.72
UBXN1-203ENST00000436354 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
UBXN1-203ENST00000436354 MUC17Q685J3 4493 aa10.56□□□□□ -0.72
UBXN1-203ENST00000436354 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
UBXN1-203ENST00000436354 SMIM11BQ8TCY0 68 aa10.55□□□□□ -0.72
UBXN1-203ENST00000436354 NHP2Q9NX24 153 aaKnown RBP10.55□□□□□ -0.72
UBXN1-203ENST00000436354 TRBV7-6A0A0J9YX20 115 aa10.54□□□□□ -0.72
UBXN1-203ENST00000436354 PRLHP81277 87 aa10.54□□□□□ -0.72
UBXN1-203ENST00000436354 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
UBXN1-203ENST00000436354 Q6ZRX8 168 aa10.54□□□□□ -0.72
UBXN1-203ENST00000436354 PRO1854Q9UHT4 67 aa10.54□□□□□ -0.72
UBXN1-203ENST00000436354 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.73
UBXN1-203ENST00000436354 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.73
UBXN1-203ENST00000436354 K7ERJ3 54 aa10.5□□□□□ -0.73
UBXN1-203ENST00000436354 Q9BRP9 147 aa10.5□□□□□ -0.73
UBXN1-203ENST00000436354 SMCR5Q8TEV8 140 aa10.49□□□□□ -0.73
UBXN1-203ENST00000436354 COX7BP24311 80 aa10.48□□□□□ -0.73
UBXN1-203ENST00000436354 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
UBXN1-203ENST00000436354 SPAG11AQ6PDA7 123 aa10.47□□□□□ -0.73
UBXN1-203ENST00000436354 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
UBXN1-203ENST00000436354 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.73
UBXN1-203ENST00000436354 HIGD2AQ9BW72 106 aa10.46□□□□□ -0.73
UBXN1-203ENST00000436354 H7C2G1 150 aa10.45□□□□□ -0.74
UBXN1-203ENST00000436354 C3orf22Q8N5N4 141 aa10.45□□□□□ -0.74
UBXN1-203ENST00000436354 DHRS4-AS1Q9P1J3 65 aa10.45□□□□□ -0.74
UBXN1-203ENST00000436354 VAMP3Q15836 100 aa10.43□□□□□ -0.74
UBXN1-203ENST00000436354 Q1RN00 199 aa10.43□□□□□ -0.74
UBXN1-203ENST00000436354 ASB16-AS1Q495Z4 193 aa10.43□□□□□ -0.74
UBXN1-203ENST00000436354 ERC2-IT1O76042 136 aa10.42□□□□□ -0.74
UBXN1-203ENST00000436354 TRIAP1O43715 76 aa10.41□□□□□ -0.74
UBXN1-203ENST00000436354 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
UBXN1-203ENST00000436354 KRTAP13-3Q3SY46 172 aa10.4□□□□□ -0.74
UBXN1-203ENST00000436354 LINC00575Q6W349 94 aa10.4□□□□□ -0.74
UBXN1-203ENST00000436354 CRCT1Q9UGL9 99 aa10.39□□□□□ -0.75
UBXN1-203ENST00000436354 ZNF706Q9Y5V0 76 aaPredicted RBP10.39□□□□□ -0.75
UBXN1-203ENST00000436354 H0YGX0 51 aa10.38□□□□□ -0.75
UBXN1-203ENST00000436354 BATFQ16520 125 aa10.38□□□□□ -0.75
UBXN1-203ENST00000436354 SPRR4Q96PI1 79 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms