RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
CD44-210ENST00000434472 F8P00451 2351 aa6.77□□□□□ -1.33
CD44-210ENST00000434472 K7EIL1 84 aa6.77□□□□□ -1.33
CD44-210ENST00000434472 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
CD44-210ENST00000434472 ETDCA0A1B0GVM5 59 aa6.76□□□□□ -1.33
CD44-210ENST00000434472 A0A1B0GW54 56 aa6.76□□□□□ -1.33
CD44-210ENST00000434472 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
CD44-210ENST00000434472 SPRR1AP35321 89 aa6.75□□□□□ -1.33
CD44-210ENST00000434472 Q6ZRX8 168 aa6.75□□□□□ -1.33
CD44-210ENST00000434472 TRRAPQ9Y4A5 3859 aa6.74□□□□□ -1.33
CD44-210ENST00000434472 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
CD44-210ENST00000434472 TMEM258P61165 79 aa6.74□□□□□ -1.33
CD44-210ENST00000434472 CASC10Q5T4H9 136 aa6.74□□□□□ -1.33
CD44-210ENST00000434472 CMYA5Q8N3K9 4069 aa6.74□□□□□ -1.33
CD44-210ENST00000434472 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
CD44-210ENST00000434472 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
CD44-210ENST00000434472 PRB2P02812 416 aaPredicted RBP6.73□□□□□ -1.33
CD44-210ENST00000434472 Q8N377 158 aa6.73□□□□□ -1.33
CD44-210ENST00000434472 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
CD44-210ENST00000434472 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
CD44-210ENST00000434472 NREPQ16612 68 aa6.72□□□□□ -1.33
CD44-210ENST00000434472 DEFB105AQ8NG35 78 aa6.72□□□□□ -1.33
CD44-210ENST00000434472 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
CD44-210ENST00000434472 J3KT08 172 aa6.7□□□□□ -1.34
CD44-210ENST00000434472 FUSP35637 526 aaKnown RBP eCLIP6.7□□□□□ -1.34
CD44-210ENST00000434472 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
CD44-210ENST00000434472 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
CD44-210ENST00000434472 FAM19A5Q7Z5A7 132 aaPredicted RBP6.69□□□□□ -1.34
CD44-210ENST00000434472 Q9BRP9 147 aa6.69□□□□□ -1.34
CD44-210ENST00000434472 CNBPP62633 177 aaKnown RBP6.68□□□□□ -1.34
CD44-210ENST00000434472 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
CD44-210ENST00000434472 KRTAP7-1Q8IUC3 87 aa6.68□□□□□ -1.34
CD44-210ENST00000434472 TENM3Q9P273 2699 aa6.68□□□□□ -1.34
CD44-210ENST00000434472 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
CD44-210ENST00000434472 UBE2DNLQ8IWF7 75 aa6.68□□□□□ -1.34
CD44-210ENST00000434472 C16orf90A8MZG2 172 aa6.67□□□□□ -1.34
CD44-210ENST00000434472 BPY2O14599 106 aa6.67□□□□□ -1.34
CD44-210ENST00000434472 UBE2BP63146 152 aa6.67□□□□□ -1.34
CD44-210ENST00000434472 TNP2Q05952 138 aa6.67□□□□□ -1.34
CD44-210ENST00000434472 PKIGQ9Y2B9 76 aa6.67□□□□□ -1.34
CD44-210ENST00000434472 PSCAO43653 123 aa6.66□□□□□ -1.34
CD44-210ENST00000434472 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
CD44-210ENST00000434472 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
CD44-210ENST00000434472 CYSTM1Q9H1C7 97 aa6.66□□□□□ -1.34
CD44-210ENST00000434472 STAB1Q9NY15 2570 aa6.65□□□□□ -1.34
CD44-210ENST00000434472 APLNQ9ULZ1 77 aa6.65□□□□□ -1.34
CD44-210ENST00000434472 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.34
CD44-210ENST00000434472 IGKV4-1P06312 121 aa6.65□□□□□ -1.35
CD44-210ENST00000434472 ST20-AS1Q8NBB2 130 aa6.65□□□□□ -1.35
CD44-210ENST00000434472 Q8NBF4 154 aa6.65□□□□□ -1.35
CD44-210ENST00000434472 F8WEM9 126 aa6.64□□□□□ -1.35
CD44-210ENST00000434472 C3orf84H3BNL1 204 aa6.64□□□□□ -1.35
CD44-210ENST00000434472 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
CD44-210ENST00000434472 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 A0A096LNI7 61 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 A0A1W2PNM2 257 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
CD44-210ENST00000434472 B9D2Q9BPU9 175 aa6.62□□□□□ -1.35
CD44-210ENST00000434472 HUWE1Q7Z6Z7 4374 aaKnown RBP6.62□□□□□ -1.35
CD44-210ENST00000434472 PKD1L1Q8TDX9 2849 aa6.61□□□□□ -1.35
CD44-210ENST00000434472 NDUFC1O43677 76 aa6.61□□□□□ -1.35
CD44-210ENST00000434472 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
CD44-210ENST00000434472 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
CD44-210ENST00000434472 FAM236DA0A1B0GTK5 79 aa6.6□□□□□ -1.35
CD44-210ENST00000434472 FAM236CP0DP71 79 aa6.6□□□□□ -1.35
CD44-210ENST00000434472 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
CD44-210ENST00000434472 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
CD44-210ENST00000434472 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 H0Y9J4 135 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 Q8N9L7 120 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 NUPR2A6NF83 97 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 H7BZZ5 65 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 LINC00476Q8WZB0 136 aa6.58□□□□□ -1.36
CD44-210ENST00000434472 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
CD44-210ENST00000434472 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
CD44-210ENST00000434472 ANK2Q01484 3957 aa6.56□□□□□ -1.36
CD44-210ENST00000434472 NOTCH1P46531 2555 aa6.56□□□□□ -1.36
CD44-210ENST00000434472 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
CD44-210ENST00000434472 NBDYA0A0U1RRE5 68 aa6.56□□□□□ -1.36
CD44-210ENST00000434472 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
CD44-210ENST00000434472 PRLHP81277 87 aa6.55□□□□□ -1.36
CD44-210ENST00000434472 OCR1Q9BZK8 76 aa6.55□□□□□ -1.36
CD44-210ENST00000434472 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
CD44-210ENST00000434472 SPRR1BP22528 89 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 UBE2AP49459 152 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 IGFL1Q6UW32 110 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 LRCOL1A6NCL2 159 aa6.54□□□□□ -1.36
CD44-210ENST00000434472 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
CD44-210ENST00000434472 COL6A5A8TX70 2615 aa6.53□□□□□ -1.36
CD44-210ENST00000434472 DSCR10P59022 87 aa6.52□□□□□ -1.37
CD44-210ENST00000434472 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
CD44-210ENST00000434472 A0A0U1RQV1 116 aa6.51□□□□□ -1.37
CD44-210ENST00000434472 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
CD44-210ENST00000434472 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms