RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 HIGD2AQ9BW72 106 aa5.71□□□□□ -1.5
LINC01090-202ENST00000434418 PLEKHB2Q96CS7 222 aa5.7□□□□□ -1.5
LINC01090-202ENST00000434418 CHTOPQ9Y3Y2 248 aaKnown RBP5.7□□□□□ -1.5
LINC01090-202ENST00000434418 APOC3P02656 99 aa5.69□□□□□ -1.5
LINC01090-202ENST00000434418 CBLN2Q8IUK8 224 aa5.69□□□□□ -1.5
LINC01090-202ENST00000434418 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
LINC01090-202ENST00000434418 TMEM223A0PJW6 202 aa5.68□□□□□ -1.5
LINC01090-202ENST00000434418 NCR3O14931 201 aa5.68□□□□□ -1.5
LINC01090-202ENST00000434418 SFTA2Q6UW10 78 aa5.68□□□□□ -1.5
LINC01090-202ENST00000434418 SMIM13P0DJ93 91 aa5.67□□□□□ -1.5
LINC01090-202ENST00000434418 IFI27L1Q96BM0 104 aa5.67□□□□□ -1.5
LINC01090-202ENST00000434418 MEIG1Q5JSS6 88 aa5.66□□□□□ -1.5
LINC01090-202ENST00000434418 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
LINC01090-202ENST00000434418 SPRR4Q96PI1 79 aa5.66□□□□□ -1.5
LINC01090-202ENST00000434418 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
LINC01090-202ENST00000434418 TRAV12-1A0A0B4J245 112 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 H0Y8G0 127 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 ATP6V1G1O75348 118 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 SNAPINO95295 136 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 SVBPQ8N300 66 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
LINC01090-202ENST00000434418 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
LINC01090-202ENST00000434418 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
LINC01090-202ENST00000434418 DAND5Q8N907 189 aa5.64□□□□□ -1.51
LINC01090-202ENST00000434418 CHCHD1Q96BP2 118 aaKnown RBP5.64□□□□□ -1.51
LINC01090-202ENST00000434418 YPEL4Q96NS1 127 aa5.64□□□□□ -1.51
LINC01090-202ENST00000434418 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
LINC01090-202ENST00000434418 TRBV10-3A0A0K0K1G6 114 aa5.62□□□□□ -1.51
LINC01090-202ENST00000434418 ETDCA0A1B0GVM5 59 aa5.62□□□□□ -1.51
LINC01090-202ENST00000434418 HSBP1O75506 76 aa5.62□□□□□ -1.51
LINC01090-202ENST00000434418 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
LINC01090-202ENST00000434418 NDUFA12Q9UI09 145 aa5.62□□□□□ -1.51
LINC01090-202ENST00000434418 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
LINC01090-202ENST00000434418 SPRR1AP35321 89 aa5.61□□□□□ -1.51
LINC01090-202ENST00000434418 HERV-K104P63124 156 aa5.61□□□□□ -1.51
LINC01090-202ENST00000434418 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
LINC01090-202ENST00000434418 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
LINC01090-202ENST00000434418 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
LINC01090-202ENST00000434418 MYMXA0A1B0GTQ4 84 aa5.6□□□□□ -1.51
LINC01090-202ENST00000434418 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
LINC01090-202ENST00000434418 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
LINC01090-202ENST00000434418 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
LINC01090-202ENST00000434418 CTAG1AP78358 180 aa5.59□□□□□ -1.51
LINC01090-202ENST00000434418 PMCHL2Q9BQD1 86 aa5.59□□□□□ -1.51
LINC01090-202ENST00000434418 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
LINC01090-202ENST00000434418 A4D1N5 150 aa5.58□□□□□ -1.52
LINC01090-202ENST00000434418 SERF1AO75920 110 aa5.58□□□□□ -1.52
LINC01090-202ENST00000434418 TRGC2P03986 189 aa5.58□□□□□ -1.52
LINC01090-202ENST00000434418 MOBPQ13875 183 aa5.58□□□□□ -1.52
LINC01090-202ENST00000434418 LINC00587B1AMM8 73 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 LEPROTO15243 131 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 LEPROTL1O95214 131 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 DDTP30046 118 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 FP248Q71RG6 208 aaPredicted RBP5.57□□□□□ -1.52
LINC01090-202ENST00000434418 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
LINC01090-202ENST00000434418 J3QQQ9 107 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 FABP4P15090 132 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 PLNP26678 52 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 S100A12P80511 92 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 Q9BRP9 147 aa5.56□□□□□ -1.52
LINC01090-202ENST00000434418 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
LINC01090-202ENST00000434418 NPC2P61916 151 aa5.55□□□□□ -1.52
LINC01090-202ENST00000434418 Q6ZRX8 168 aa5.55□□□□□ -1.52
LINC01090-202ENST00000434418 MIEN1Q9BRT3 115 aa5.55□□□□□ -1.52
LINC01090-202ENST00000434418 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 TRBV10-2A0A0K0K1G8 114 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 DPM2O94777 84 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 SPINK1P00995 79 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 LGALS3P17931 250 aaKnown RBP5.54□□□□□ -1.52
LINC01090-202ENST00000434418 HERVK_113P61574 105 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 S100A7L2Q5SY68 101 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
LINC01090-202ENST00000434418 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
LINC01090-202ENST00000434418 IGKCP01834 107 aa5.53□□□□□ -1.52
LINC01090-202ENST00000434418 SOSTDC1Q6X4U4 206 aa5.53□□□□□ -1.52
LINC01090-202ENST00000434418 HSPB8Q9UJY1 196 aa5.53□□□□□ -1.52
LINC01090-202ENST00000434418 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
LINC01090-202ENST00000434418 IGLV6-57P01721 117 aa5.52□□□□□ -1.53
LINC01090-202ENST00000434418 C9orf153Q5TBE3 101 aa5.52□□□□□ -1.53
LINC01090-202ENST00000434418 NMUP48645 174 aa5.51□□□□□ -1.53
LINC01090-202ENST00000434418 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
LINC01090-202ENST00000434418 ST20-AS1Q8NBB2 130 aa5.51□□□□□ -1.53
LINC01090-202ENST00000434418 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
LINC01090-202ENST00000434418 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
LINC01090-202ENST00000434418 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
LINC01090-202ENST00000434418 NDUFC2O95298 119 aa5.5□□□□□ -1.53
LINC01090-202ENST00000434418 SSBP3-AS1Q7Z2R9 100 aa5.5□□□□□ -1.53
LINC01090-202ENST00000434418 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
LINC01090-202ENST00000434418 COLCA2A8K830 154 aa5.48□□□□□ -1.53
LINC01090-202ENST00000434418 E9PLD3 99 aa5.48□□□□□ -1.53
LINC01090-202ENST00000434418 SLC25A20O43772 301 aa5.48□□□□□ -1.53
LINC01090-202ENST00000434418 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
LINC01090-202ENST00000434418 JOSD1Q15040 202 aaPredicted RBP5.48□□□□□ -1.53
LINC01090-202ENST00000434418 SLC7A5P1Q8MH63 180 aa5.48□□□□□ -1.53
LINC01090-202ENST00000434418 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
LINC01090-202ENST00000434418 OR13C6PQ8NH95 151 aa5.46□□□□□ -1.54
LINC01090-202ENST00000434418 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms